PREDICTED: Drosophila obscura sodium channel protein para
LOCUS XM_022361490 6865 bp mRNA linear INV 14-MAY-2021
(LOC111070739), transcript variant X8, mRNA.
ACCESSION XM_022361490
VERSION XM_022361490.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361490.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..6865
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..6865
/gene="LOC111070739"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 51 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 6 samples with support for all annotated
introns"
/db_xref="GeneID:111070739"
CDS 237..6716
/gene="LOC111070739"
/codon_start=1
/product="sodium channel protein para isoform X8"
/protein_id="XP_022217182.2"
/db_xref="GeneID:111070739"
/translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK
RAEGEIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPFYSNILT
FVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIM
PTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTMG
IDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALM
GLQIYMGVLTQKCIKKFPLDGSWGNLTDENWAYHNSNNSNWYSEDDGISFPLCGNISG
AGQCEDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGPW
HMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKAA
KLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKMS
IRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNIRRGSRSSHKYTI
RNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLG
SRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNSRNQSVGATNGGTTC
LDPNHKVEHRDFEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQAA
GRHSRASDRGVSVYYFPTEDDDEDGPTLKDKALEALMKGIEVFCVWDCCWVWLKLQEW
ISLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERILKCGNYFFTATFAIEATMK
LCAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTL
NLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDNKDRFPDGDLPRWNFT
DFMHSFMIVFRVLCGEWIESMWDCMHVGDVSCIPFFLATVVIGNLVVLNLFLALLLSN
FGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSGE
RTNQISWIWSEEHGDNELELGHDEILADGLIKKGIKEATQLEVAIGDGMEFTIHGDMK
NNKPKKSKYLNNATMIGNSINHQDNRLEHELNHRGLSLQDDDTASINSYGSHKNRPFK
DESHKGSAETMEGEEKRDASKEDLGIDEELDEEGELEEGPLDGDIIIHANDEDILDEY
PADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQLIENKYFETAVITMILMSSLA
LALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIV
MVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNV
LLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHEIIPNRNACESENYTWVNSAMN
FDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSF
FTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWR
PQAIVFEIVTDKKFDIVIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSE
CLLKIFALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGR
VLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGIND
VYNFKTFGQSMILLFQMSTSAGWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGITF
LLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYI
RYDQLSEFLDVLEPPLQIHKPNKYKIISMDIPICRGDLMYCVDILDALTKDFFARKGN
PIEETGEIGEIAARPDTEGYEPVSSTLWRQREEYCARLIQHAWRKHKTRAEGGGAPSD
AEGDGPEDGDAGGGGGAALMLGVLDVPDAAGDAATTGSHDGATALDPETDPSGVPAAA
AVAPQPAGDGGEGPDGGATADPHESNVNSPTMDGATAGSPGAGSAGSTGRQTAVLVES
DGFVTKNGHKVVIHSRSPSITSRTADV"
misc_feature 654..1508
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 1863..2420
/gene="LOC111070739"
/note="Cytoplasmic domain of voltage-gated Na+ ion
channel; Region: Na_trans_cytopl; pfam11933"
/db_xref="CDD:463401"
misc_feature 2649..3284
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 3360..4133
/gene="LOC111070739"
/note="Sodium ion transport-associated; Region:
Na_trans_assoc; pfam06512"
/db_xref="CDD:461936"
misc_feature 4143..4958
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 4926..5084
/gene="LOC111070739"
/note="Inactivation gate of the voltage-gated sodium
channel alpha subunits; Region: Na_channel_gate; cd13433"
/db_xref="CDD:240441"
misc_feature 4971..4982
/gene="LOC111070739"
/note="putative hydrophobic latch; other site"
/db_xref="CDD:240441"
misc_feature 5106..5858
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 5889..6032
/gene="LOC111070739"
/note="Voltage-dependent L-type calcium channel,
IQ-associated; Region: GPHH; pfam16905"
/db_xref="CDD:465306"
ORIGIN
1 acaaaagcaa cagcaacaac aactaccaca attgcaacaa caacaataag cagagcatca
61 acgaaagcaa gcagtcaagc gcaacatcga ttgacatcga ttaacgcatc gtgctaagcg
121 gcgggcgcta atcgaacatg gcgcctcgga tatagttgta gctttaatgt agcaggcgac
181 atccatgtgc ctcatgcctt ggaaatctaa ggctctcatc gttggccgca tagacaatga
241 cagaagattc cgactcgata tctgaggaag aacgaagttt gttccgtccc tttacccgcg
301 aatcattggt gcaaatcgaa caacgcattg ccgctgaaca tgaaaagcag aaggagctgg
361 aaagaaagag agccgaggga gagatccgat atgatgacga ggacgaggat gaaggtccac
421 aaccggatcc tacacttgaa cagggtgtgc caatacctgt tcgactgcag ggcagcttcc
481 ctccggaatt ggcctccact cccctcgagg atatcgatcc cttctacagc aatatactga
541 cattcgtagt tgtaagcaaa ggaaaagata tttttcgctt ttctgcatca aaagcaatgt
601 ggctgctcga tccattcaat ccgatacgtc gtgtggccat ttacatttta gtgcatccac
661 tattttcgtt attcatcatt accacaattc tcgtcaactg catcctgatg ataatgccga
721 caacgcccac agttgagtcc actgaggtga tattcaccgg aatctacaca tttgaatcag
781 ctgttaaagt gatggcacga ggtttcattt tatgcccgtt tacgtatctt agagatgcat
841 ggaattggct ggacttcgta gtaatagctt tagcttatgt gaccatgggt atagatttag
901 gtaatcttgc agccttgcga acgtttaggg tgctgcgagc gcttaaaacc gtagccattg
961 tgccaggctt gaagaccatt gtcggtgcgg tcatcgaatc tgtaaagaat ctgcgcgatg
1021 tgataatttt gacaatgttc tccctgtcgg tgttcgcgct gatggggctg caaatctaca
1081 tgggcgtgct aacgcagaag tgcatcaaga agttcccgct ggacggctcc tggggcaacc
1141 tgaccgacga gaactgggcc tatcacaata gcaacaactc taattggtat tcggaagacg
1201 acggtatatc ctttccgttg tgcggtaata tctctggagc ggggcaatgt gaagacgatt
1261 acgtgtgtct gcaggggttc gggccgaacc cgaactatgg ctacaccagt ttcgattcgt
1321 tcggttgggc gtttctgtcc gccttccggc tgatgacgca ggacttctgg gaggatctgt
1381 atcagctggt gttgcgtgcc gcaggaccct ggcacatgct gttctttata gtcatcatct
1441 tcctaggttc attctatctt gtgaatttga ttttggccat tgttgccatg tcgtatgacg
1501 aattgcaaaa gaaggccgaa gaagaagagg ctgccgaaga ggaggcgata cgtgaagccg
1561 aggaagctgc cgccgccaaa gcagccaagc tggaggagcg cgccaatgcg caggcccagg
1621 ccgccgccga tgcagctgcc gccgaagagg cggctcttca tccggagatg gccaagagtc
1681 cgacgtattc gtgcatcagc tatgagctat ttgtgggcgg cgagaaaggc aacgatgaca
1741 acaacaagga gaagatgtcc atacgcagcg ttgaggtgga gtcggagtcg gtgagcgtta
1801 tacaaagaca accagcacct accacagcac accaagctac caaagttcgt aaagtgagca
1861 cgacatcctt atccttacct ggttcaccgt ttaacatacg caggggatca cgtagttctc
1921 acaagtacac gatccggaat ggacgtggac gctttggtat acccggcagc gatcgcaagc
1981 cgttggtatt gtcaacatat caggatgctc agcagcactt gccctatgcc gatgattcga
2041 acgctgttac gcccatgtcc gaggagaacg gtgccattat agtgcccgtt tattatggaa
2101 atctaggctc caggcattca tcgtatactt cgcatcagtc cagaatatcg tatacctcac
2161 atggcgatct attgggcggc atggccgtca tgggcgtcag cacaatgacc aaggagagca
2221 aattgcgaaa tcgcaactca cgcaatcaat cagtgggcgc caccaatggc ggcaccacct
2281 gcctggaccc caatcacaag gtcgagcatc gcgacttcga aatcggtctg gagtgcacgg
2341 acgaagctgg caagattaaa catcatgaca atccttttat cgagcccgtc cagacacaaa
2401 cggtagtcga catgaaagat gtgatggtac tgaatgacat tatcgaacag gccgctggtc
2461 ggcacagtcg ggctagtgat cgcggtgtct ccgtttacta tttcccaaca gaggacgatg
2521 atgaggatgg gccgacatta aaagacaagg ccctcgaagc gctaatgaaa ggcatcgaag
2581 tgttttgtgt gtgggactgt tgctgggttt ggttgaaatt gcaggagtgg atatcgctga
2641 tcgtcttcga tccctttgtc gagctcttca tcacgctgtg cattgtggtc aacacgatgt
2701 tcatggccat ggaccatcac gacatgaaca aggagatgga acgcatcctt aagtgcggaa
2761 attatttctt cacggcaaca ttcgccattg aggcaaccat gaaactgtgc gccatgagcc
2821 ccaaatacta tttccaggag ggctggaaca tctttgactt catcattgtg gcactctcat
2881 tgctggagct gggcctcgag ggcgttcagg gcctctccgt cttgcgttcg tttcgtttgc
2941 tgcgtgtatt caaattggcc aagtcctggc caacacttaa tttactcatt tcgattatgg
3001 gacgcaccat gggcgctttg ggtaatctga catttgtact ttgcattatc atcttcatct
3061 ttgcggtgat gggaatgcaa ctgttcggaa agaattatca tgataacaag gatcgcttcc
3121 cggacggtga cctgccccgc tggaacttca ccgacttcat gcacagcttc atgatcgtgt
3181 ttcgggtgct atgcggcgag tggatcgagt ccatgtggga ctgtatgcac gtgggcgatg
3241 tatcgtgcat tccattcttc ttggccaccg ttgtcatcgg caatttagtg gttcttaacc
3301 ttttcttagc cctgcttttg tcaaattttg gttcatctag cttatcagcg ccgacagccg
3361 ataacgatac caataaaata gccgaggcct tcaatcgaat tgggcgattt aaaagttggg
3421 ttaagcgtaa tattgctgat tgtttcaagt taatacgtaa caaattgaca aatcaaataa
3481 gtgatcaacc atcaggtgag aggaccaacc agatcagttg gatttggagc gaagagcacg
3541 gcgacaacga gctggagctg ggccacgacg agatactcgc cgacgggctc atcaagaagg
3601 gcatcaagga ggcgacacag ctggaggtgg ccatcggtga tggcatggag ttcacgatac
3661 acggcgacat gaagaacaac aagccgaaga aatccaaata tctaaataac gcaacgatga
3721 ttggcaactc aattaaccac caagacaata gactggaaca cgagctaaac catagaggtt
3781 tgtccttaca ggacgacgac actgccagca ttaactcata tggtagccat aagaatcgac
3841 cattcaagga tgagagccac aagggcagcg ccgagacgat ggagggcgag gagaagcggg
3901 acgccagcaa ggaggattta ggtatcgatg aggagctcga cgaggagggc gaattggagg
3961 agggcccgct cgacggcgat atcatcatac atgccaacga tgaggatata ctcgatgaat
4021 atccagctga ttgctgcccc gattcgtact ataagaaatt tccgatctta gccggtgatg
4081 atgactcgcc gttctggcaa ggatggggca atttacgact gaaaactttt caattaattg
4141 aaaataaata ttttgaaaca gctgttatca ctatgatttt aatgagtagc ttagctttgg
4201 cattagaaga tgtacatctg ccacaaagac ccatactgca ggatatttta tactatatgg
4261 acagaatatt tacggttata ttcttcttgg aaatgttaat caagtggctg gcgctcggct
4321 tcaaagtgta cttcacgaac gcgtggtgct ggctcgattt cgtcattgtc atggtatcgc
4381 ttatcaactt cgttgcttca cttgttggag ctggtggtat tcaagccttc aagactatgc
4441 gaacgttaag agcactgaga ccactacgtg ccatgtcccg tatgcagggc atgagggtcg
4501 tcgttaatgc gctggtacaa gctataccgt ccatcttcaa tgtgctattg gtgtgtctaa
4561 tattttggct aatttttgcc ataatgggtg tacagctttt tgctggaaaa tattttaagt
4621 gcgaggacat gaatggcacg aagctcagcc acgagatcat accaaatcgc aatgcctgcg
4681 aaagcgagaa ctacacgtgg gtgaattcag caatgaattt cgatcatgta ggtaacgcgt
4741 atctgtgcct tttccaagtg gccaccttca aaggctggat acaaatcatg aacgatgcta
4801 tcgattcacg agaggtggac aagcagccaa ttcgtgaaac gaacatctac atgtatttat
4861 atttcgtatt cttcatcata tttggatcat ttttcacact caatctgttc attggtgtta
4921 tcattgataa ttttaatgag caaaagaaaa aagcaggtgg atcattagaa atgttcatga
4981 cagaagatca gaaaaagtac tataatgcta tgaaaaagat gggctctaaa aaaccattaa
5041 aagccattcc aagaccaagg tggcgtccac aagcaatagt ctttgaaata gtaaccgata
5101 agaaattcga tatagtcata atgttattca ttggtctgaa catgttcacc atgacactcg
5161 atcgttacga tgcgtcggac acgtacaacg cggtccttga ctatctcaat gcgatattcg
5221 tagttatttt cagttccgaa tgtctattaa aaatattcgc tttacgatat cactatttta
5281 ttgagccatg gaatttattt gatgtagtag ttgtcatttt atccatctta ggtctcgtac
5341 ttagcgatat tatcgagaaa tacttcgtat cgccgacact gctccgagtg gtgcgcgtgg
5401 ccaaagtggg tcgcgtactg cgtctggtga agggcgccaa gggtatacga acgctgctgt
5461 tcgccctggc catgtcgctg ccggcgctgt tcaacatctg cctgctgctg ttcctggtca
5521 tgttcatctt cgcgatattc ggcatgtcgt tcttcatgca tgtgaaggag aagagcggca
5581 tcaacgacgt ctacaacttc aagacgttcg gacagagcat gatcctgctc tttcagatgt
5641 ctacctcagc cggttgggat ggtgtactcg acgccattat caatgaggaa gcatgcgatc
5701 cacccgacaa cgacaaaggc tatccgggca attgtggttc agcgaccgtt ggaataacgt
5761 ttctcctctc atacctagtt ataagctttt tgatagttat taatatgtac attgctgtca
5821 ttctcgagaa ctatagtcag gccaccgagg atgtgcagga gggtctcacc gacgacgatt
5881 acgatatgta ctatgagatc tggcaacagt tcgatccgga gggcacccag tacatacgat
5941 acgaccagct gtccgagttc ctcgacgtgc tggagccccc gctccagatt cacaagccca
6001 acaagtacaa aatcatatcg atggacatac ccatctgtcg cggtgacctc atgtactgtg
6061 tggacatact ggacgcactg accaaagact ttttcgcgcg caaaggcaat cccattgagg
6121 agacgggcga gattggtgag attgccgcca ggccggacac cgagggctac gagcccgtct
6181 cctccaccct ctggcgacag cgggaggagt actgtgcccg cctcattcaa catgcctggc
6241 gcaagcataa aacgcgcgcc gagggcggtg gtgcaccgtc cgacgcggaa ggcgacggcc
6301 ccgaagatgg tgatgcgggt ggcggtggcg gggcggcgct gatgctgggt gttctggatg
6361 ttccagatgc tgctggcgat gcagcaacca ctggctccca tgacggggca acggcactcg
6421 atcccgagac cgatccatcg ggagtaccgg cggcagcggc ggtggcccca cagccagccg
6481 gtgacggcgg cgagggaccg gatggaggag caacagccga tccgcacgag agcaatgtaa
6541 atagtccgac gatggacggc gcgacggcgg gcagcccggg cgcagggagc gctggcagca
6601 ctggccgaca gacggccgtt ctcgtggaga gcgatgggtt tgtgaccaag aacgggcaca
6661 aggttgtaat acactcgcgt tcgccgagca taacgtcgcg cacggcggat gtctgagcca
6721 ggcctcgccc ccccctccaa gatgcacgcg agtattaggt gcaggtgcag atgcagtgca
6781 gtggtggtgc cacaacaaca acaacaacaa cagcaggtgc cactggtagc tgcaattgca
6841 actgcaacag cagcaacagg aagaa