PREDICTED: Drosophila obscura sodium channel protein para
LOCUS XM_022361487 6868 bp mRNA linear INV 14-MAY-2021
(LOC111070739), transcript variant X7, mRNA.
ACCESSION XM_022361487
VERSION XM_022361487.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361487.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..6868
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..6868
/gene="LOC111070739"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 47 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 6 samples with support for all annotated
introns"
/db_xref="GeneID:111070739"
CDS 237..6719
/gene="LOC111070739"
/codon_start=1
/product="sodium channel protein para isoform X7"
/protein_id="XP_022217179.2"
/db_xref="GeneID:111070739"
/translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK
RAEGEVIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPFYSNIL
TFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMI
MPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTM
GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL
MGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWAYHNSNNSNWYSEDDGISFPLCGNIS
GAGQCEDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGP
WHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKA
AKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKM
SIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNIRRGSRSSHKYT
IRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNL
GSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNSRNQSVGATNGGTT
CLDPNHKVEHRDFEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQA
AGRHSRASDRGVSVYYFPTEDDDEDGPTLKDKALEALMKGIEVFCVWDCCWVWLKLQE
WISLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERILKCGNYFFTATFAIEATM
KLCAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPT
LNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDNKDRFPDGDLPRWNF
TDFMHSFMIVFRVLCGEWIESMWDCMHVGDVSCIPFFLATVVIGNLVVLNLFLALLLS
NFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSG
ERTNQISWIWSEEHGDNELELGHDEILADGLIKKGIKEATQLEVAIGDGMEFTIHGDM
KNNKPKKSKYLNNATMIGNSINHQDNRLEHELNHRGLSLQDDDTASINSYGSHKNRPF
KDESHKGSAETMEGEEKRDASKEDLGIDEELDEEGELEEGPLDGDIIIHANDEDILDE
YPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQLIENKYFETAVITMILMSSL
ALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVI
VMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFN
VLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHEIIPNRNACESENYTWVNSAM
NFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGS
FFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRW
RPQAIVFEIVTDKKFDIVIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSS
ECLLKIFALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVG
RVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGIN
DVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGIT
FLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQY
IRYDQLSEFLDVLEPPLQIHKPNKYKIISMDIPICRGDLMYCVDILDALTKDFFARKG
NPIEETGEIGEIAARPDTEGYEPVSSTLWRQREEYCARLIQHAWRKHKTRAEGGGAPS
DAEGDGPEDGDAGGGGGAALMLGVLDVPDAAGDAATTGSHDGATALDPETDPSGVPAA
AAVAPQPAGDGGEGPDGGATADPHESNVNSPTMDGATAGSPGAGSAGSTGRQTAVLVE
SDGFVTKNGHKVVIHSRSPSITSRTADV"
misc_feature 657..1511
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 1866..2423
/gene="LOC111070739"
/note="Cytoplasmic domain of voltage-gated Na+ ion
channel; Region: Na_trans_cytopl; pfam11933"
/db_xref="CDD:463401"
misc_feature 2652..3287
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 3363..4136
/gene="LOC111070739"
/note="Sodium ion transport-associated; Region:
Na_trans_assoc; pfam06512"
/db_xref="CDD:461936"
misc_feature 4146..4961
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 4929..5087
/gene="LOC111070739"
/note="Inactivation gate of the voltage-gated sodium
channel alpha subunits; Region: Na_channel_gate; cd13433"
/db_xref="CDD:240441"
misc_feature 4974..4985
/gene="LOC111070739"
/note="putative hydrophobic latch; other site"
/db_xref="CDD:240441"
misc_feature 5109..5861
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 5892..6035
/gene="LOC111070739"
/note="Voltage-dependent L-type calcium channel,
IQ-associated; Region: GPHH; pfam16905"
/db_xref="CDD:465306"
ORIGIN
1 acaaaagcaa cagcaacaac aactaccaca attgcaacaa caacaataag cagagcatca
61 acgaaagcaa gcagtcaagc gcaacatcga ttgacatcga ttaacgcatc gtgctaagcg
121 gcgggcgcta atcgaacatg gcgcctcgga tatagttgta gctttaatgt agcaggcgac
181 atccatgtgc ctcatgcctt ggaaatctaa ggctctcatc gttggccgca tagacaatga
241 cagaagattc cgactcgata tctgaggaag aacgaagttt gttccgtccc tttacccgcg
301 aatcattggt gcaaatcgaa caacgcattg ccgctgaaca tgaaaagcag aaggagctgg
361 aaagaaagag agccgaggga gaggtgatcc gatatgatga cgaggacgag gatgaaggtc
421 cacaaccgga tcctacactt gaacagggtg tgccaatacc tgttcgactg cagggcagct
481 tccctccgga attggcctcc actcccctcg aggatatcga tcccttctac agcaatatac
541 tgacattcgt agttgtaagc aaaggaaaag atatttttcg cttttctgca tcaaaagcaa
601 tgtggctgct cgatccattc aatccgatac gtcgtgtggc catttacatt ttagtgcatc
661 cactattttc gttattcatc attaccacaa ttctcgtcaa ctgcatcctg atgataatgc
721 cgacaacgcc cacagttgag tccactgagg tgatattcac cggaatctac acatttgaat
781 cagctgttaa agtgatggca cgaggtttca ttttatgccc gtttacgtat cttagagatg
841 catggaattg gctggacttc gtagtaatag ctttagctta tgtgaccatg ggtatagatt
901 taggtaatct tgcagccttg cgaacgttta gggtgctgcg agcgcttaaa accgtagcca
961 ttgtgccagg cttgaagacc attgtcggtg cggtcatcga atctgtaaag aatctgcgcg
1021 atgtgataat tttgacaatg ttctccctgt cggtgttcgc gctgatgggg ctgcaaatct
1081 acatgggcgt gctaacgcag aagtgcatca agaagttccc gctggacggc tcctggggca
1141 acctgaccga cgagaactgg gcctatcaca atagcaacaa ctctaattgg tattcggaag
1201 acgacggtat atcctttccg ttgtgcggta atatctctgg agcggggcaa tgtgaagacg
1261 attacgtgtg tctgcagggg ttcgggccga acccgaacta tggctacacc agtttcgatt
1321 cgttcggttg ggcgtttctg tccgccttcc ggctgatgac gcaggacttc tgggaggatc
1381 tgtatcagct ggtgttgcgt gccgcaggac cctggcacat gctgttcttt atagtcatca
1441 tcttcctagg ttcattctat cttgtgaatt tgattttggc cattgttgcc atgtcgtatg
1501 acgaattgca aaagaaggcc gaagaagaag aggctgccga agaggaggcg atacgtgaag
1561 ccgaggaagc tgccgccgcc aaagcagcca agctggagga gcgcgccaat gcgcaggccc
1621 aggccgccgc cgatgcagct gccgccgaag aggcggctct tcatccggag atggccaaga
1681 gtccgacgta ttcgtgcatc agctatgagc tatttgtggg cggcgagaaa ggcaacgatg
1741 acaacaacaa ggagaagatg tccatacgca gcgttgaggt ggagtcggag tcggtgagcg
1801 ttatacaaag acaaccagca cctaccacag cacaccaagc taccaaagtt cgtaaagtga
1861 gcacgacatc cttatcctta cctggttcac cgtttaacat acgcagggga tcacgtagtt
1921 ctcacaagta cacgatccgg aatggacgtg gacgctttgg tatacccggc agcgatcgca
1981 agccgttggt attgtcaaca tatcaggatg ctcagcagca cttgccctat gccgatgatt
2041 cgaacgctgt tacgcccatg tccgaggaga acggtgccat tatagtgccc gtttattatg
2101 gaaatctagg ctccaggcat tcatcgtata cttcgcatca gtccagaata tcgtatacct
2161 cacatggcga tctattgggc ggcatggccg tcatgggcgt cagcacaatg accaaggaga
2221 gcaaattgcg aaatcgcaac tcacgcaatc aatcagtggg cgccaccaat ggcggcacca
2281 cctgcctgga ccccaatcac aaggtcgagc atcgcgactt cgaaatcggt ctggagtgca
2341 cggacgaagc tggcaagatt aaacatcatg acaatccttt tatcgagccc gtccagacac
2401 aaacggtagt cgacatgaaa gatgtgatgg tactgaatga cattatcgaa caggccgctg
2461 gtcggcacag tcgggctagt gatcgcggtg tctccgttta ctatttccca acagaggacg
2521 atgatgagga tgggccgaca ttaaaagaca aggccctcga agcgctaatg aaaggcatcg
2581 aagtgttttg tgtgtgggac tgttgctggg tttggttgaa attgcaggag tggatatcgc
2641 tgatcgtctt cgatcccttt gtcgagctct tcatcacgct gtgcattgtg gtcaacacga
2701 tgttcatggc catggaccat cacgacatga acaaggagat ggaacgcatc cttaagtgcg
2761 gaaattattt cttcacggca acattcgcca ttgaggcaac catgaaactg tgcgccatga
2821 gccccaaata ctatttccag gagggctgga acatctttga cttcatcatt gtggcactct
2881 cattgctgga gctgggcctc gagggcgttc agggcctctc cgtcttgcgt tcgtttcgtt
2941 tgctgcgtgt attcaaattg gccaagtcct ggccaacact taatttactc atttcgatta
3001 tgggacgcac catgggcgct ttgggtaatc tgacatttgt actttgcatt atcatcttca
3061 tctttgcggt gatgggaatg caactgttcg gaaagaatta tcatgataac aaggatcgct
3121 tcccggacgg tgacctgccc cgctggaact tcaccgactt catgcacagc ttcatgatcg
3181 tgtttcgggt gctatgcggc gagtggatcg agtccatgtg ggactgtatg cacgtgggcg
3241 atgtatcgtg cattccattc ttcttggcca ccgttgtcat cggcaattta gtggttctta
3301 accttttctt agccctgctt ttgtcaaatt ttggttcatc tagcttatca gcgccgacag
3361 ccgataacga taccaataaa atagccgagg ccttcaatcg aattgggcga tttaaaagtt
3421 gggttaagcg taatattgct gattgtttca agttaatacg taacaaattg acaaatcaaa
3481 taagtgatca accatcaggt gagaggacca accagatcag ttggatttgg agcgaagagc
3541 acggcgacaa cgagctggag ctgggccacg acgagatact cgccgacggg ctcatcaaga
3601 agggcatcaa ggaggcgaca cagctggagg tggccatcgg tgatggcatg gagttcacga
3661 tacacggcga catgaagaac aacaagccga agaaatccaa atatctaaat aacgcaacga
3721 tgattggcaa ctcaattaac caccaagaca atagactgga acacgagcta aaccatagag
3781 gtttgtcctt acaggacgac gacactgcca gcattaactc atatggtagc cataagaatc
3841 gaccattcaa ggatgagagc cacaagggca gcgccgagac gatggagggc gaggagaagc
3901 gggacgccag caaggaggat ttaggtatcg atgaggagct cgacgaggag ggcgaattgg
3961 aggagggccc gctcgacggc gatatcatca tacatgccaa cgatgaggat atactcgatg
4021 aatatccagc tgattgctgc cccgattcgt actataagaa atttccgatc ttagccggtg
4081 atgatgactc gccgttctgg caaggatggg gcaatttacg actgaaaact tttcaattaa
4141 ttgaaaataa atattttgaa acagctgtta tcactatgat tttaatgagt agcttagctt
4201 tggcattaga agatgtacat ctgccacaaa gacccatact gcaggatatt ttatactata
4261 tggacagaat atttacggtt atattcttct tggaaatgtt aatcaagtgg ctggcgctcg
4321 gcttcaaagt gtacttcacg aacgcgtggt gctggctcga tttcgtcatt gtcatggtat
4381 cgcttatcaa cttcgttgct tcacttgttg gagctggtgg tattcaagcc ttcaagacta
4441 tgcgaacgtt aagagcactg agaccactac gtgccatgtc ccgtatgcag ggcatgaggg
4501 tcgtcgttaa tgcgctggta caagctatac cgtccatctt caatgtgcta ttggtgtgtc
4561 taatattttg gctaattttt gccataatgg gtgtacagct ttttgctgga aaatatttta
4621 agtgcgagga catgaatggc acgaagctca gccacgagat cataccaaat cgcaatgcct
4681 gcgaaagcga gaactacacg tgggtgaatt cagcaatgaa tttcgatcat gtaggtaacg
4741 cgtatctgtg ccttttccaa gtggccacct tcaaaggctg gatacaaatc atgaacgatg
4801 ctatcgattc acgagaggtg gacaagcagc caattcgtga aacgaacatc tacatgtatt
4861 tatatttcgt attcttcatc atatttggat catttttcac actcaatctg ttcattggtg
4921 ttatcattga taattttaat gagcaaaaga aaaaagcagg tggatcatta gaaatgttca
4981 tgacagaaga tcagaaaaag tactataatg ctatgaaaaa gatgggctct aaaaaaccat
5041 taaaagccat tccaagacca aggtggcgtc cacaagcaat agtctttgaa atagtaaccg
5101 ataagaaatt cgatatagtc ataatgttat tcattggtct gaacatgttc accatgacac
5161 tcgatcgtta cgatgcgtcg gacacgtaca acgcggtcct tgactatctc aatgcgatat
5221 tcgtagttat tttcagttcc gaatgtctat taaaaatatt cgctttacga tatcactatt
5281 ttattgagcc atggaattta tttgatgtag tagttgtcat tttatccatc ttaggtctcg
5341 tacttagcga tattatcgag aaatacttcg tatcgccgac actgctccga gtggtgcgcg
5401 tggccaaagt gggtcgcgta ctgcgtctgg tgaagggcgc caagggtata cgaacgctgc
5461 tgttcgccct ggccatgtcg ctgccggcgc tgttcaacat ctgcctgctg ctgttcctgg
5521 tcatgttcat cttcgcgata ttcggcatgt cgttcttcat gcatgtgaag gagaagagcg
5581 gcatcaacga cgtctacaac ttcaagacgt tcggacagag catgatcctg ctctttcaga
5641 tgtctacctc agccggttgg gatggtgtac tcgacgccat tatcaatgag gaagcatgcg
5701 atccacccga caacgacaaa ggctatccgg gcaattgtgg ttcagcgacc gttggaataa
5761 cgtttctcct ctcataccta gttataagct ttttgatagt tattaatatg tacattgctg
5821 tcattctcga gaactatagt caggccaccg aggatgtgca ggagggtctc accgacgacg
5881 attacgatat gtactatgag atctggcaac agttcgatcc ggagggcacc cagtacatac
5941 gatacgacca gctgtccgag ttcctcgacg tgctggagcc cccgctccag attcacaagc
6001 ccaacaagta caaaatcata tcgatggaca tacccatctg tcgcggtgac ctcatgtact
6061 gtgtggacat actggacgca ctgaccaaag actttttcgc gcgcaaaggc aatcccattg
6121 aggagacggg cgagattggt gagattgccg ccaggccgga caccgagggc tacgagcccg
6181 tctcctccac cctctggcga cagcgggagg agtactgtgc ccgcctcatt caacatgcct
6241 ggcgcaagca taaaacgcgc gccgagggcg gtggtgcacc gtccgacgcg gaaggcgacg
6301 gccccgaaga tggtgatgcg ggtggcggtg gcggggcggc gctgatgctg ggtgttctgg
6361 atgttccaga tgctgctggc gatgcagcaa ccactggctc ccatgacggg gcaacggcac
6421 tcgatcccga gaccgatcca tcgggagtac cggcggcagc ggcggtggcc ccacagccag
6481 ccggtgacgg cggcgaggga ccggatggag gagcaacagc cgatccgcac gagagcaatg
6541 taaatagtcc gacgatggac ggcgcgacgg cgggcagccc gggcgcaggg agcgctggca
6601 gcactggccg acagacggcc gttctcgtgg agagcgatgg gtttgtgacc aagaacgggc
6661 acaaggttgt aatacactcg cgttcgccga gcataacgtc gcgcacggcg gatgtctgag
6721 ccaggcctcg cccccccctc caagatgcac gcgagtatta ggtgcaggtg cagatgcagt
6781 gcagtggtgg tgccacaaca acaacaacaa caacagcagg tgccactggt agctgcaatt
6841 gcaactgcaa cagcagcaac aggaagaa