PREDICTED: Drosophila obscura sodium channel protein para
LOCUS XM_022361481 6901 bp mRNA linear INV 14-MAY-2021
(LOC111070739), transcript variant X1, mRNA.
ACCESSION XM_022361481
VERSION XM_022361481.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361481.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..6901
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..6901
/gene="LOC111070739"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 47 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 7 samples with support for all annotated
introns"
/db_xref="GeneID:111070739"
CDS 237..6752
/gene="LOC111070739"
/codon_start=1
/product="sodium channel protein para isoform X1"
/protein_id="XP_022217173.2"
/db_xref="GeneID:111070739"
/translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK
RAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPL
EDIDPFYSNILTFVVVSKGKDIFRFSASKAMWLLDPFNPIRRVAIYILVHPLFSLFII
TTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLD
FVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII
LTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWAYHNSNNSNWYSEDD
GISFPLCGNISGAGQCEDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWED
LYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAI
REAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGE
KGNDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNI
RRGSRSSHKYTIRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENG
AIIVPVYYGNLGSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNSRN
QSVGATNGGTTCLDPNHKVEHRDFEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKD
VMVLNDIIEQAAGRHSRASDRGVSVYYFPTEDDDEDGPTLKDKALEALMKGIEVFCVW
DCCWVWLKLQEWISLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERILKCGNYF
FTATFAIEATMKLCAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLL
RVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDNKDR
FPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMHVGDVSCIPFFLATVVIGNLV
VLNLFLALLLSNFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNK
LTNQISDQPSGERTNQISWIWSEEHGDNELELGHDEILADGLIKKGIKEATQLEVAIG
DGMEFTIHGDMKNNKPKKSKYLNNATMIGNSINHQDNRLEHELNHRGLSLQDDDTASI
NSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGIDEELDEEGELEEGPLDGDII
IHANDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQLIENKYFET
AVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYF
TNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVN
ALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHEIIPNRNACE
SENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMY
LYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSK
KPLKAIPRPRWRPQAIVFEIVTDKKFDIVIMLFIGLNMFTMTLDRYDASDTYNAVLDY
LNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPT
LLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSF
FMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINEEACDPPDNDKGYP
GNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEI
WQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIISMDIPICRGDLMYCVDILD
ALTKDFFARKGNPIEETGEIGEIAARPDTEGYEPVSSTLWRQREEYCARLIQHAWRKH
KTRAEGGGAPSDAEGDGPEDGDAGGGGGAALMLGVLDVPDAAGDAATTGSHDGATALD
PETDPSGVPAAAAVAPQPAGDGGEGPDGGATADPHESNVNSPTMDGATAGSPGAGSAG
STGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRTADV"
misc_feature 690..1544
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 1899..2456
/gene="LOC111070739"
/note="Cytoplasmic domain of voltage-gated Na+ ion
channel; Region: Na_trans_cytopl; pfam11933"
/db_xref="CDD:463401"
misc_feature 2685..3320
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 3396..4169
/gene="LOC111070739"
/note="Sodium ion transport-associated; Region:
Na_trans_assoc; pfam06512"
/db_xref="CDD:461936"
misc_feature 4179..4994
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 4962..5120
/gene="LOC111070739"
/note="Inactivation gate of the voltage-gated sodium
channel alpha subunits; Region: Na_channel_gate; cd13433"
/db_xref="CDD:240441"
misc_feature 5007..5018
/gene="LOC111070739"
/note="putative hydrophobic latch; other site"
/db_xref="CDD:240441"
misc_feature 5142..5894
/gene="LOC111070739"
/note="Ion transport protein; Region: Ion_trans;
pfam00520"
/db_xref="CDD:459842"
misc_feature 5925..6068
/gene="LOC111070739"
/note="Voltage-dependent L-type calcium channel,
IQ-associated; Region: GPHH; pfam16905"
/db_xref="CDD:465306"
ORIGIN
1 acaaaagcaa cagcaacaac aactaccaca attgcaacaa caacaataag cagagcatca
61 acgaaagcaa gcagtcaagc gcaacatcga ttgacatcga ttaacgcatc gtgctaagcg
121 gcgggcgcta atcgaacatg gcgcctcgga tatagttgta gctttaatgt agcaggcgac
181 atccatgtgc ctcatgcctt ggaaatctaa ggctctcatc gttggccgca tagacaatga
241 cagaagattc cgactcgata tctgaggaag aacgaagttt gttccgtccc tttacccgcg
301 aatcattggt gcaaatcgaa caacgcattg ccgctgaaca tgaaaagcag aaggagctgg
361 aaagaaagag agccgaggga gaggtgccgc aatatggtcg caagaaaaaa caaaaagaaa
421 tccgatatga tgacgaggac gaggatgaag gtccacaacc ggatcctaca cttgaacagg
481 gtgtgccaat acctgttcga ctgcagggca gcttccctcc ggaattggcc tccactcccc
541 tcgaggatat cgatcccttc tacagcaata tactgacatt cgtagttgta agcaaaggaa
601 aagatatttt tcgcttttct gcatcaaaag caatgtggct gctcgatcca ttcaatccga
661 tacgtcgtgt ggccatttac attttagtgc atccactatt ttcgttattc atcattacca
721 caattctcgt caactgcatc ctgatgataa tgccgacaac gcccacagtt gagtccactg
781 aggtgatatt caccggaatc tacacatttg aatcagctgt taaagtgatg gcacgaggtt
841 tcattttatg cccgtttacg tatcttagag atgcatggaa ttggctggac ttcgtagtaa
901 tagctttagc ttatgtgacc atgggtatag atttaggtaa tcttgcagcc ttgcgaacgt
961 ttagggtgct gcgagcgctt aaaaccgtag ccattgtgcc aggcttgaag accattgtcg
1021 gtgcggtcat cgaatctgta aagaatctgc gcgatgtgat aattttgaca atgttctccc
1081 tgtcggtgtt cgcgctgatg gggctgcaaa tctacatggg cgtgctaacg cagaagtgca
1141 tcaagaagtt cccgctggac ggctcctggg gcaacctgac cgacgagaac tgggcctatc
1201 acaatagcaa caactctaat tggtattcgg aagacgacgg tatatccttt ccgttgtgcg
1261 gtaatatctc tggagcgggg caatgtgaag acgattacgt gtgtctgcag gggttcgggc
1321 cgaacccgaa ctatggctac accagtttcg attcgttcgg ttgggcgttt ctgtccgcct
1381 tccggctgat gacgcaggac ttctgggagg atctgtatca gctggtgttg cgtgccgcag
1441 gaccctggca catgctgttc tttatagtca tcatcttcct aggttcattc tatcttgtga
1501 atttgatttt ggccattgtt gccatgtcgt atgacgaatt gcaaaagaag gccgaagaag
1561 aagaggctgc cgaagaggag gcgatacgtg aagccgagga agctgccgcc gccaaagcag
1621 ccaagctgga ggagcgcgcc aatgcgcagg cccaggccgc cgccgatgca gctgccgccg
1681 aagaggcggc tcttcatccg gagatggcca agagtccgac gtattcgtgc atcagctatg
1741 agctatttgt gggcggcgag aaaggcaacg atgacaacaa caaggagaag atgtccatac
1801 gcagcgttga ggtggagtcg gagtcggtga gcgttataca aagacaacca gcacctacca
1861 cagcacacca agctaccaaa gttcgtaaag tgagcacgac atccttatcc ttacctggtt
1921 caccgtttaa catacgcagg ggatcacgta gttctcacaa gtacacgatc cggaatggac
1981 gtggacgctt tggtataccc ggcagcgatc gcaagccgtt ggtattgtca acatatcagg
2041 atgctcagca gcacttgccc tatgccgatg attcgaacgc tgttacgccc atgtccgagg
2101 agaacggtgc cattatagtg cccgtttatt atggaaatct aggctccagg cattcatcgt
2161 atacttcgca tcagtccaga atatcgtata cctcacatgg cgatctattg ggcggcatgg
2221 ccgtcatggg cgtcagcaca atgaccaagg agagcaaatt gcgaaatcgc aactcacgca
2281 atcaatcagt gggcgccacc aatggcggca ccacctgcct ggaccccaat cacaaggtcg
2341 agcatcgcga cttcgaaatc ggtctggagt gcacggacga agctggcaag attaaacatc
2401 atgacaatcc ttttatcgag cccgtccaga cacaaacggt agtcgacatg aaagatgtga
2461 tggtactgaa tgacattatc gaacaggccg ctggtcggca cagtcgggct agtgatcgcg
2521 gtgtctccgt ttactatttc ccaacagagg acgatgatga ggatgggccg acattaaaag
2581 acaaggccct cgaagcgcta atgaaaggca tcgaagtgtt ttgtgtgtgg gactgttgct
2641 gggtttggtt gaaattgcag gagtggatat cgctgatcgt cttcgatccc tttgtcgagc
2701 tcttcatcac gctgtgcatt gtggtcaaca cgatgttcat ggccatggac catcacgaca
2761 tgaacaagga gatggaacgc atccttaagt gcggaaatta tttcttcacg gcaacattcg
2821 ccattgaggc aaccatgaaa ctgtgcgcca tgagccccaa atactatttc caggagggct
2881 ggaacatctt tgacttcatc attgtggcac tctcattgct ggagctgggc ctcgagggcg
2941 ttcagggcct ctccgtcttg cgttcgtttc gtttgctgcg tgtattcaaa ttggccaagt
3001 cctggccaac acttaattta ctcatttcga ttatgggacg caccatgggc gctttgggta
3061 atctgacatt tgtactttgc attatcatct tcatctttgc ggtgatggga atgcaactgt
3121 tcggaaagaa ttatcatgat aacaaggatc gcttcccgga cggtgacctg ccccgctgga
3181 acttcaccga cttcatgcac agcttcatga tcgtgtttcg ggtgctatgc ggcgagtgga
3241 tcgagtccat gtgggactgt atgcacgtgg gcgatgtatc gtgcattcca ttcttcttgg
3301 ccaccgttgt catcggcaat ttagtggttc ttaacctttt cttagccctg cttttgtcaa
3361 attttggttc atctagctta tcagcgccga cagccgataa cgataccaat aaaatagccg
3421 aggccttcaa tcgaattggg cgatttaaaa gttgggttaa gcgtaatatt gctgattgtt
3481 tcaagttaat acgtaacaaa ttgacaaatc aaataagtga tcaaccatca ggtgagagga
3541 ccaaccagat cagttggatt tggagcgaag agcacggcga caacgagctg gagctgggcc
3601 acgacgagat actcgccgac gggctcatca agaagggcat caaggaggcg acacagctgg
3661 aggtggccat cggtgatggc atggagttca cgatacacgg cgacatgaag aacaacaagc
3721 cgaagaaatc caaatatcta aataacgcaa cgatgattgg caactcaatt aaccaccaag
3781 acaatagact ggaacacgag ctaaaccata gaggtttgtc cttacaggac gacgacactg
3841 ccagcattaa ctcatatggt agccataaga atcgaccatt caaggatgag agccacaagg
3901 gcagcgccga gacgatggag ggcgaggaga agcgggacgc cagcaaggag gatttaggta
3961 tcgatgagga gctcgacgag gagggcgaat tggaggaggg cccgctcgac ggcgatatca
4021 tcatacatgc caacgatgag gatatactcg atgaatatcc agctgattgc tgccccgatt
4081 cgtactataa gaaatttccg atcttagccg gtgatgatga ctcgccgttc tggcaaggat
4141 ggggcaattt acgactgaaa acttttcaat taattgaaaa taaatatttt gaaacagctg
4201 ttatcactat gattttaatg agtagcttag ctttggcatt agaagatgta catctgccac
4261 aaagacccat actgcaggat attttatact atatggacag aatatttacg gttatattct
4321 tcttggaaat gttaatcaag tggctggcgc tcggcttcaa agtgtacttc acgaacgcgt
4381 ggtgctggct cgatttcgtc attgtcatgg tatcgcttat caacttcgtt gcttcacttg
4441 ttggagctgg tggtattcaa gccttcaaga ctatgcgaac gttaagagca ctgagaccac
4501 tacgtgccat gtcccgtatg cagggcatga gggtcgtcgt taatgcgctg gtacaagcta
4561 taccgtccat cttcaatgtg ctattggtgt gtctaatatt ttggctaatt tttgccataa
4621 tgggtgtaca gctttttgct ggaaaatatt ttaagtgcga ggacatgaat ggcacgaagc
4681 tcagccacga gatcatacca aatcgcaatg cctgcgaaag cgagaactac acgtgggtga
4741 attcagcaat gaatttcgat catgtaggta acgcgtatct gtgccttttc caagtggcca
4801 ccttcaaagg ctggatacaa atcatgaacg atgctatcga ttcacgagag gtggacaagc
4861 agccaattcg tgaaacgaac atctacatgt atttatattt cgtattcttc atcatatttg
4921 gatcattttt cacactcaat ctgttcattg gtgttatcat tgataatttt aatgagcaaa
4981 agaaaaaagc aggtggatca ttagaaatgt tcatgacaga agatcagaaa aagtactata
5041 atgctatgaa aaagatgggc tctaaaaaac cattaaaagc cattccaaga ccaaggtggc
5101 gtccacaagc aatagtcttt gaaatagtaa ccgataagaa attcgatata gtcataatgt
5161 tattcattgg tctgaacatg ttcaccatga cactcgatcg ttacgatgcg tcggacacgt
5221 acaacgcggt ccttgactat ctcaatgcga tattcgtagt tattttcagt tccgaatgtc
5281 tattaaaaat attcgcttta cgatatcact attttattga gccatggaat ttatttgatg
5341 tagtagttgt cattttatcc atcttaggtc tcgtacttag cgatattatc gagaaatact
5401 tcgtatcgcc gacactgctc cgagtggtgc gcgtggccaa agtgggtcgc gtactgcgtc
5461 tggtgaaggg cgccaagggt atacgaacgc tgctgttcgc cctggccatg tcgctgccgg
5521 cgctgttcaa catctgcctg ctgctgttcc tggtcatgtt catcttcgcg atattcggca
5581 tgtcgttctt catgcatgtg aaggagaaga gcggcatcaa cgacgtctac aacttcaaga
5641 cgttcggaca gagcatgatc ctgctctttc agatgtctac ctcagccggt tgggatggtg
5701 tactcgacgc cattatcaat gaggaagcat gcgatccacc cgacaacgac aaaggctatc
5761 cgggcaattg tggttcagcg accgttggaa taacgtttct cctctcatac ctagttataa
5821 gctttttgat agttattaat atgtacattg ctgtcattct cgagaactat agtcaggcca
5881 ccgaggatgt gcaggagggt ctcaccgacg acgattacga tatgtactat gagatctggc
5941 aacagttcga tccggagggc acccagtaca tacgatacga ccagctgtcc gagttcctcg
6001 acgtgctgga gcccccgctc cagattcaca agcccaacaa gtacaaaatc atatcgatgg
6061 acatacccat ctgtcgcggt gacctcatgt actgtgtgga catactggac gcactgacca
6121 aagacttttt cgcgcgcaaa ggcaatccca ttgaggagac gggcgagatt ggtgagattg
6181 ccgccaggcc ggacaccgag ggctacgagc ccgtctcctc caccctctgg cgacagcggg
6241 aggagtactg tgcccgcctc attcaacatg cctggcgcaa gcataaaacg cgcgccgagg
6301 gcggtggtgc accgtccgac gcggaaggcg acggccccga agatggtgat gcgggtggcg
6361 gtggcggggc ggcgctgatg ctgggtgttc tggatgttcc agatgctgct ggcgatgcag
6421 caaccactgg ctcccatgac ggggcaacgg cactcgatcc cgagaccgat ccatcgggag
6481 taccggcggc agcggcggtg gccccacagc cagccggtga cggcggcgag ggaccggatg
6541 gaggagcaac agccgatccg cacgagagca atgtaaatag tccgacgatg gacggcgcga
6601 cggcgggcag cccgggcgca gggagcgctg gcagcactgg ccgacagacg gccgttctcg
6661 tggagagcga tgggtttgtg accaagaacg ggcacaaggt tgtaatacac tcgcgttcgc
6721 cgagcataac gtcgcgcacg gcggatgtct gagccaggcc tcgccccccc ctccaagatg
6781 cacgcgagta ttaggtgcag gtgcagatgc agtgcagtgg tggtgccaca acaacaacaa
6841 caacaacagc aggtgccact ggtagctgca attgcaactg caacagcagc aacaggaaga
6901 a