PREDICTED: Drosophila obscura calcitonin gene-related peptide type
LOCUS XM_022361466 1816 bp mRNA linear INV 14-MAY-2021
1 receptor (LOC111070726), mRNA.
ACCESSION XM_022361466
VERSION XM_022361466.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361466.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1816
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1816
/gene="LOC111070726"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 7 Proteins, and 98% coverage of
the annotated genomic feature by RNAseq alignments"
/db_xref="GeneID:111070726"
CDS 103..1614
/gene="LOC111070726"
/codon_start=1
/product="calcitonin gene-related peptide type 1 receptor"
/protein_id="XP_022217158.2"
/db_xref="GeneID:111070726"
/translation="MTTVSHIEASPMEATMEASAASASAGQLAHPQENLRIFLKHLYA
ECVYRYQNDTYDEDPAVPATDYGVEVPENFSPVPRYLENAVLNEGSIDMQSVDEASAA
NNEIYATILSATMATNLEEQHQANLNNNNSSSLFCPLNFDGYLCWPRTPAGTVLSQYC
PDFVEGFNSKFLAHKTCLETGSWFRHPVSNLTWSNYTNCVDYEDLEFRQFINELYVKG
YALSLVALLISIIIFLGFKSLRCTRIRIHVHLFASLACTCVSWILWYRLVVERPELIA
ESPLWCIGLHLVIHYFMLVNYFWMFCEGLHLHLVLVVVFVKDTIVMRWFKIISWLCPL
NVALLYGAARHYSSTDNEHCWINDSLFLWIFSVPITLSLLASFIFLINVLRVIVRKLH
PQSAQPAPLAIRKAVRATIILVPLFGLQHFLLPYRPDAGTQLDRFYQLLSVILVSLQG
FVVSFLFCFANHDVIFAMRTLLNKWVPTLVAAPPAGSNTGQLATTTPSRELGV"
misc_feature 508..702
/gene="LOC111070726"
/note="Hormone receptor domain; Region: HRM; pfam02793"
/db_xref="CDD:397086"
misc_feature 724..1524
/gene="LOC111070726"
/note="insect neuropeptide receptor subgroup B4 and
related proteins, member of the class B family of
seven-transmembrane G protein-coupled receptors; Region:
7tmB1_NPR_B4_insect-like; cd15260"
/db_xref="CDD:320388"
misc_feature 730..807
/gene="LOC111070726"
/note="TM helix 1 [structural motif]; Region: TM helix 1"
/db_xref="CDD:320388"
misc_feature order(745..747,757..759,883..885,892..897,904..906,
949..951,970..972,1183..1188,1192..1194,1198..1200,
1363..1365,1372..1374,1417..1419,1429..1431)
/gene="LOC111070726"
/note="putative polypeptide ligand binding pocket
[polypeptide binding]; other site"
/db_xref="CDD:320388"
misc_feature 832..900
/gene="LOC111070726"
/note="TM helix 2 [structural motif]; Region: TM helix 2"
/db_xref="CDD:320388"
misc_feature 949..1032
/gene="LOC111070726"
/note="TM helix 3 [structural motif]; Region: TM helix 3"
/db_xref="CDD:320388"
misc_feature 1066..1128
/gene="LOC111070726"
/note="TM helix 4 [structural motif]; Region: TM helix 4"
/db_xref="CDD:320388"
misc_feature 1174..1263
/gene="LOC111070726"
/note="TM helix 5 [structural motif]; Region: TM helix 5"
/db_xref="CDD:320388"
misc_feature 1306..1389
/gene="LOC111070726"
/note="TM helix 6 [structural motif]; Region: TM helix 6"
/db_xref="CDD:320388"
misc_feature 1408..1485
/gene="LOC111070726"
/note="TM helix 7 [structural motif]; Region: TM helix 7"
/db_xref="CDD:320388"
ORIGIN
1 ttaaatgaaa cgggcacagc tggtttccgc agatcagctg gaaaaactca aaatggatct
61 gataatttcg tagacgaaac cgtcatccag cagctttgag atatgacaac agtttcccac
121 attgaggcgt cccccatgga ggcaacgatg gaggcctccg cagcgtccgc atcggccggg
181 cagctggccc atccccagga gaatctgcgc atatttttaa agcatttgta tgccgagtgc
241 gtctatcgct accagaacga cacatacgac gaggacccgg cggtaccggc aacagactat
301 ggggtggagg tgccggagaa cttcagtccg gtgccgcgat atctggagaa cgctgtgctc
361 aacgagggca gcattgatat gcagagtgtg gacgaggcgt cggcagccaa taacgagata
421 tatgccacca ttctaagcgc cacaatggcc acgaatctgg aggagcagca ccaggcgaat
481 ctcaacaata acaatagcag cagcctcttt tgtcccctga acttcgatgg atatctatgc
541 tggccccgca ccccggccgg caccgtattg agtcaatatt gccccgattt cgtggaggga
601 ttcaacagca aatttctggc ccacaagacc tgcctggaga cgggctcgtg gttccgtcat
661 ccggttagca atcttacctg gtcgaattac accaactgtg tggactacga ggacttggag
721 tttcgtcagt tcatcaacga gctgtatgtg aagggctacg ccctctcgct ggtggctcta
781 ctcatatcaa tcatcatatt cctgggcttc aaatcgctgc gctgcacccg cattcgcatt
841 catgtccatc tgttcgcctc gctggcctgc acttgtgtgt cctggatcct ctggtaccgt
901 ctggtggtgg agcgacccga gctcatagcc gaaagcccgc tctggtgcat tggtctccat
961 ctcgtcatac attacttcat gctggttaac tatttctgga tgttctgcga gggtctgcat
1021 ctgcacttgg ttctcgttgt ggtctttgtc aaggacacga ttgttatgcg ctggttcaaa
1081 atcatcagct ggctctgtcc gcttaatgtg gcgctgctct atggcgcagc acggcactac
1141 agcagcaccg acaatgaaca ctgctggatc aatgacagcc tctttctgtg gatcttctcg
1201 gtgcccataa ctctctctct gctggccagc tttatcttcc tcatcaatgt tctgcgggtg
1261 attgtacgga aactgcatcc acagtcggcc cagcccgctc ccctggccat ccgcaaagcc
1321 gtgcgggcca ccatcattct ggtgccgctt ttcggactgc agcactttct gctaccctat
1381 cgaccagatg ccggcactca gctggatcga ttctatcagc tgctctccgt cattctggtc
1441 agcctgcagg gcttcgttgt ctcgttcctg ttttgcttcg ccaatcacga tgtcatattc
1501 gccatgcgca cactcctcaa caaatgggtg cccactctgg tggcggcacc gccggcaggg
1561 agtaatactg gacaattggc cacaaccacg cccagtcgtg agctgggcgt ctaaagtata
1621 ccgcatcagc aacagcatcc caagagtccg aatctacccg agcaactcgc agataatcgc
1681 agagcagaga ttttgaagga gcctgagatt cgtttctctc ttgaggtgcg aaacgatctg
1741 tctgtcgctt tccttaagct ttcagtattc gagtatctga agatctgatc ttaaagatcg
1801 ttaaacggca tttatt