PREDICTED: Drosophila obscura proteasome subunit beta type-3-like
LOCUS XM_022361448 752 bp mRNA linear INV 14-MAY-2021
(LOC111070714), transcript variant X2, mRNA.
ACCESSION XM_022361448
VERSION XM_022361448.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361448.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..752
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..752
/gene="LOC111070714"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 100% coverage of the annotated
genomic feature by RNAseq alignments, including 6 samples
with support for all annotated introns"
/db_xref="GeneID:111070714"
CDS 252..653
/gene="LOC111070714"
/codon_start=1
/product="proteasome subunit beta type-3-like isoform X2"
/protein_id="XP_022217140.2"
/db_xref="GeneID:111070714"
/translation="MNIRQKLRLQVITPDIYIKNLSNILYEQRPKPYQVDCIVLGLQP
GTMRPFISTLDMLGVPNELDDFVAIGKRSPQLHATCEALWKPKMEPADLLQTISSSIL
ADTDPKVTIGALVYVVERGRITESTVEIEED"
misc_feature <285..635
/gene="LOC111070714"
/note="The Ntn hydrolases (N-terminal nucleophile) are a
diverse superfamily of of enzymes that are activated
autocatalytically via an N-terminally lcated nucleophilic
amino acid. N-terminal nucleophile (NTN-) hydrolase
superfamily, which contains a...; Region: Ntn_hydrolase;
cl00467"
/db_xref="CDD:469781"
ORIGIN
1 taaaaatggc cacacttctg ataaatttaa aacattgtag ccgcagaaac taaacaacta
61 aagaaagaaa gaaatcatag caatatgatt taaagtatca atcaaatgtc ttcaactgca
121 agcaacacgg cacatagtgt tggaggtagc atggtggcca tgcaaggcat ggactgtgtg
181 gccattgcta cggatcatgc ggctgacaat aatttgttca gaggcccaag aatgatatta
241 tagccgtgtg catgaacatc cgccagaagt tgcgattaca ggtgataacg ccagacatat
301 atatcaagaa tctgtccaac atattgtacg aacaacgccc gaaaccctat caagtggact
361 gcattgtgct tggcctccag cccggtacaa tgaggccgtt catttccacg ctggatatgc
421 ttggagtccc aaatgaactg gacgacttcg ttgcaattgg aaagcgcagc ccgcagcttc
481 atgctacgtg cgaggctctg tggaaaccaa agatggaacc tgcggatctg ttgcagacta
541 tttcgtcatc cattttggcg gataccgacc ccaaagtaac cattggtgcc cttgtctatg
601 ttgttgaaag aggcaggata acagagtcca cagtggagat tgaagaggac taggcaactt
661 aatataattc tgtgtgacat attgtttagg aaatcaaaaa aaaaaatcac gcaaaataaa
721 atgcgctcaa actgcacaca aacacacaca ca