PREDICTED: Drosophila obscura proteasome subunit beta type-3-like
LOCUS XM_022361447 782 bp mRNA linear INV 14-MAY-2021
(LOC111070714), transcript variant X1, mRNA.
ACCESSION XM_022361447
VERSION XM_022361447.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361447.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..782
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..782
/gene="LOC111070714"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 100% coverage of the annotated
genomic feature by RNAseq alignments, including 14 samples
with support for all annotated introns"
/db_xref="GeneID:111070714"
CDS 105..683
/gene="LOC111070714"
/codon_start=1
/product="proteasome subunit beta type-3-like isoform X1"
/protein_id="XP_022217139.2"
/db_xref="GeneID:111070714"
/translation="MSSTASNTAHSVGGSMVAMQGMDCVAIATDHAADNNLFRVSRRL
FCGFEGPKNDIIAVCMNIRQKLRLQVITPDIYIKNLSNILYEQRPKPYQVDCIVLGLQ
PGTMRPFISTLDMLGVPNELDDFVAIGKRSPQLHATCEALWKPKMEPADLLQTISSSI
LADTDPKVTIGALVYVVERGRITESTVEIEED"
misc_feature 141..665
/gene="LOC111070714"
/note="The Ntn hydrolases (N-terminal nucleophile) are a
diverse superfamily of of enzymes that are activated
autocatalytically via an N-terminally lcated nucleophilic
amino acid. N-terminal nucleophile (NTN-) hydrolase
superfamily, which contains a...; Region: Ntn_hydrolase;
cl00467"
/db_xref="CDD:469781"
ORIGIN
1 aaaaatggcc acacttctga taaatttaaa acattgtagc cgcagaaact aaacaactaa
61 agaaagaaag aaatcatagc aatatgattt aaagtatcaa tcaaatgtct tcaactgcaa
121 gcaacacggc acatagtgtt ggaggtagca tggtggccat gcaaggcatg gactgtgtgg
181 ccattgctac ggatcatgcg gctgacaata atttgttcag agtaagtcgc cgtttgtttt
241 gtgggttcga agggcccaag aatgatatta tagccgtgtg catgaacatc cgccagaagt
301 tgcgattaca ggtgataacg ccagacatat atatcaagaa tctgtccaac atattgtacg
361 aacaacgccc gaaaccctat caagtggact gcattgtgct tggcctccag cccggtacaa
421 tgaggccgtt catttccacg ctggatatgc ttggagtccc aaatgaactg gacgacttcg
481 ttgcaattgg aaagcgcagc ccgcagcttc atgctacgtg cgaggctctg tggaaaccaa
541 agatggaacc tgcggatctg ttgcagacta tttcgtcatc cattttggcg gataccgacc
601 ccaaagtaac cattggtgcc cttgtctatg ttgttgaaag aggcaggata acagagtcca
661 cagtggagat tgaagaggac taggcaactt aatataattc tgtgtgacat attgtttagg
721 aaatcaaaaa aaaaaatcac gcaaaataaa atgcgctcaa actgcacaca aacacacaca
781 ca