PREDICTED: Drosophila obscura structural maintenance of chromosomes
LOCUS XM_022361427 4101 bp mRNA linear INV 14-MAY-2021
protein 3 (LOC111070699), mRNA.
ACCESSION XM_022361427
VERSION XM_022361427.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361427.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..4101
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..4101
/gene="LOC111070699"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 7 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111070699"
CDS 93..3695
/gene="LOC111070699"
/codon_start=1
/product="structural maintenance of chromosomes protein 3"
/protein_id="XP_022217119.1"
/db_xref="GeneID:111070699"
/translation="MHIKQIIIQGFKSYKDQTVVEPFDKRHNVVVGRNGSGKSNFFYA
IQFVLSDEFTHLRPEQRQSLLHEGTGARVISAYVEIIFDNTDNRVPIDKEEIFLRRVI
GAKKDQYFLNKKVVPRNEVVNLLESAGFSSSNPYYIVKQGKINQMATAADSYRLKLLR
EVAGTRVYDERKEESLNLLRETDSKVEKISEYLKTIEDRLQTLEEEKEELKEYQKWDK
TRRTLEYIRYETELKDTRKALSELLTQRKSSSDKKKTYNIEIQKAQEKIKDVQKNLKE
AKKKVQSTKEERSVLMTEQQQLLREKTKLDLTIVDLNDEVQGDNKSKERADQELKNLK
VTIAEREKELDDVKPKYEAMKRKEDDCSRELQLKEQKRKELYAKQGRGSQFSSREDRD
KWIHNELKSISKQTKDKINHHSKLVEDLRKDATSEKDLGQKIEEHSSELEQLRLQIDE
HNKKYYELKKTKDQHQSMRNELWRKETQMTQQLQTQKEELSRADQALRSMAGKPILNG
CDSVRKVLDSFVERGGQSAEIARAYYGPVIENFSCDKTIYTAVEVTAANRLFHHIVES
EYEGTQILKEMNKLKLPGEVTFMPLNRLQVKIHDYPDDPDSIPMISKLKYDEQHDKAL
RYIFGKTLICRNLERATELAKSTGLDCVTLDGDQVSSKGSLTGGYFNTSRSRLEMQKK
RTEYSQQIAEFEKKLSKLRNELKSTENNINSIVSEMQKTETKQGKSKDVFEKVQGEIR
LMKEELVRIEQYRAPKERSLAQCKASLESMDSTKISLEAELKQELQSTLSSQDQREID
QLNDDIRRLNQENKEAFTQRMQFEVRKNKLDNLLINNLFRRRDELIQALQEISVEDRK
RKLNNCTTELVSAEKRIKKVNADLEEIEKRVNEAVQMQKELQLELETHVRKEKEAEEN
INKDSKQLEKWTTKENMLNQKIDECTEKIASLGALPLVDADYSRISLKNIFKELEKAN
QHLKKYNHVNKKALDQFLSFSEQKEKLYRRKEELDVGDQKIHMLIQSLEMQKVEAIQF
TFRQVAQNFTKVFKKLVPMGAGYLILKTKDNEGEEMEKEVANSDAFTGIGIRVSFTGV
EAEMREMNQLSGGQKSLVALALIFSIQKCDPAPFYLFDEIDQALDAMHRKAVADMIHE
LSDTAQFITTTFRPELLENAHKFYGVRFRNKVSHIDCVTREQAKDFVEDDNTHA"
misc_feature 96..3632
/gene="LOC111070699"
/note="RecF/RecN/SMC N terminal domain; Region: SMC_N;
pfam02463"
/db_xref="CDD:426784"
ORIGIN
1 agtatttaca agcgctaggc attatttata tgtatttgtt gtaaacaaaa agagcgcgat
61 tttgtgcaaa aatcgttgtc tacaataata aaatgcacat caagcagatt attatacaag
121 gctttaaaag ttacaaggac cagacggtgg tggaaccatt cgacaagcgt cacaacgttg
181 tggtcggacg caatggctcc ggcaagagta acttcttcta tgccattcag tttgttttga
241 gcgatgaatt cacacatttg cggcccgagc agcgccagtc gctgctccac gagggcactg
301 gggcgcgcgt aatctccgcc tatgtggaga tcatctttga caacacggac aaccgagtgc
361 cgattgacaa ggaggagatc ttcctgcgac gcgtgattgg ggccaagaag gatcagtatt
421 tcctcaacaa gaaggtggtg ccgcgcaatg aggtggtcaa tctgctggaa tcggccggct
481 tctccagctc caatccgtac tacattgtga agcagggcaa gatcaatcaa atggccacgg
541 cagccgactc ctatcgtttg aagctgttgc gcgaggtggc cggcacgcgt gtgtacgacg
601 agcgcaagga ggagtcgctg aatctgctgc gggagaccga cagcaaggtg gagaaaatct
661 ccgagtatct gaagaccatc gaggaccggc tgcagacgct cgaagaggag aaggaagagc
721 tgaaggagta ccagaagtgg gacaagacac gccgcaccct cgagtacata cgctacgaaa
781 cggagctaaa ggacaccagg aaggcgctga gcgagctgct cacgcagcga aaatcctcct
841 ccgacaagaa gaaaacctac aacattgaga tccagaaggc gcaggagaag atcaaggatg
901 tgcaaaagaa cctgaaggag gccaaaaaga aggtgcagag caccaaggag gagcgctccg
961 tcctgatgac cgaacagcag cagctgctgc gcgagaaaac caaattggat ctgaccatcg
1021 tggacctgaa cgacgaagtg cagggcgaca acaagtccaa ggagcgggcc gatcaggagc
1081 tgaagaacct caaggtgacg atagccgagc gcgaaaagga gctggacgac gtgaagccca
1141 agtatgaggc catgaaacgc aaggaggacg actgttcccg cgagctgcag ctgaaggagc
1201 agaagcgcaa ggagctttac gcgaagcagg gccgcgggtc gcagttctcg tcgcgcgagg
1261 atcgcgacaa gtggatccac aacgagctga agtcgattag caagcagacc aaggacaaga
1321 tcaatcacca ttcaaagctg gtcgaggatc tgcgcaagga tgccacctcc gagaaggatc
1381 tggggcagaa gatcgaggag cattcgtcgg agctggagca gctccgcctc cagatcgatg
1441 agcacaacaa aaagtactac gagctgaaga agaccaagga ccagcatcag tcgatgcgca
1501 acgagctgtg gcgcaaggaa acacaaatga cccaacagct gcagacccaa aaggaggagc
1561 tctcccgcgc cgatcaggcg ctgcgcagca tggccggcaa accgatcctc aatggctgcg
1621 attcggtgcg caaggtgctc gacagctttg tggagcgcgg cggtcagtcg gcagagatag
1681 cgcgcgccta ttacgggccc gtgattgaga attttagctg cgacaagacc atctacacgg
1741 ccgtggaggt gaccgccgcc aatcggctgt tccatcacat tgtggagtcc gaatacgagg
1801 gcacacagat cctcaaggag atgaacaaac tgaagctgcc cggcgaggtg acgttcatgc
1861 ccctgaatcg gctgcaggtg aagatccacg actatccgga cgatcccgat tccataccaa
1921 tgatatcgaa gctcaagtac gacgaacagc acgacaaggc gctgcggtat atctttggca
1981 agacattgat ctgccgcaac ctggagcggg ccaccgagct ggccaagagc acgggcctgg
2041 actgtgtgac cctcgatggg gatcaggtgt cgtcgaaggg ctcgctcacc ggcggctact
2101 ttaacacctc acgctcccgt ctggagatgc agaagaagcg caccgaatac tcgcagcaga
2161 tagccgagtt cgagaagaag ctgagcaagc tgcggaacga gctcaagtcc acggagaaca
2221 atatcaattc gattgtgtcc gagatgcaga agacggagac gaagcagggc aagtcgaagg
2281 atgtgttcga gaaggtccag ggcgagatac ggctgatgaa ggaggagctg gtgcgcatcg
2341 agcagtatcg ggcgcccaag gagcgctccc tggcacagtg caaggcctcg ctggagtcaa
2401 tggacagcac caagatcagt ctcgaggcgg agctcaagca ggagctgcag tcgacgctct
2461 cctcgcagga tcagcgtgag atcgatcagc taaacgatga cattcgtcgt ctcaatcaag
2521 agaacaagga ggccttcacc cagcgcatgc agttcgaggt gcgcaagaat aagctggaca
2581 atctgctgat caacaatctg ttccggcgac gggacgaact gattcaggcg ctgcaggaaa
2641 tctctgtgga ggatcgcaag cgcaagctga acaactgcac cacggagctg gtgtcggcgg
2701 agaagcgcat caagaaggtg aatgccgatc tggaggagat cgagaagcgg gtgaacgagg
2761 ccgtgcagat gcagaaggaa ctccagctgg agctggagac gcatgtgcgc aaggagaagg
2821 aggccgagga gaacatcaac aaggactcca agcagctgga gaagtggacc accaaggaga
2881 acatgctcaa tcagaagatc gacgagtgca ccgagaagat agccagcctg ggcgcccttc
2941 cattggtgga cgccgactac agtcgcattt cgctgaaaaa catcttcaag gagctggaga
3001 aggccaatca gcatctgaag aagtacaatc atgtgaacaa gaaggcgctc gatcagttcc
3061 tcagcttctc cgagcagaag gagaagctgt atcgccgcaa ggaggagctg gacgttggcg
3121 atcaaaagat ccacatgctc atccagtcgc tggagatgca aaaggtcgag gccatacagt
3181 ttaccttccg ccaggtggca cagaacttca cgaaggtctt taagaagctg gtgcccatgg
3241 gcgccggcta tctgatactg aagacaaagg acaacgaggg cgaggaaatg gaaaaggagg
3301 tggccaattc ggatgccttc acgggcatcg gtatacgtgt ctccttcacc ggcgttgagg
3361 cggagatgcg cgaaatgaat caattgtcag gtggccaaaa atctctggtc gccctggccc
3421 ttatattttc catacaaaaa tgcgatccag ctccgttcta tctgttcgat gagattgatc
3481 aggccttgga tgccatgcat cgaaaggcgg tggcggacat gatccatgag ctgagcgaca
3541 cggcacagtt cattacgacc acgttccgcc cggagttgct cgagaatgcg cacaaattct
3601 atggcgttcg attccgcaat aaggtcagcc acatcgattg tgtgacccgc gagcaggcca
3661 aggactttgt ggaggatgac aacacccatg cctaggcaga gacaacccag acacgtatca
3721 tatattcatt tcggattatt cacgcttttt ttttttttct attagaaaat atgaattatg
3781 atttattcga tttttttctc catgtaatat ttttttcctt aatctcttgg atttagttac
3841 gttgtaagat gtcctccagt tcgtgtcccc ccccgcccca acccacccct ctctctgttg
3901 cgttaattgt gttcgacccc aacccaacct gtttcctttt tcttaatatt tattccgata
3961 aagatacaga tatatatata tatacatata catagatata ggcacacaga caaggagaat
4021 tagagtgatc cagacagagt agctccaagg ccccacaaac cacatatata gatataaatt
4081 taaatagatt tacaattacc a