PREDICTED: Drosophila obscura actin-related protein 2
LOCUS XM_022361426 1911 bp mRNA linear INV 14-MAY-2021
(LOC111070698), transcript variant X3, mRNA.
ACCESSION XM_022361426
VERSION XM_022361426.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361426.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1911
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1911
/gene="LOC111070698"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 25 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111070698"
CDS 253..1437
/gene="LOC111070698"
/codon_start=1
/product="actin-related protein 2 isoform X2"
/protein_id="XP_022217118.1"
/db_xref="GeneID:111070698"
/translation="MDSKGRNVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRAV
NKIGDIEVKDLMVGDEASQLRSLLEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDP
TNTKILLTEPPMNPTKNREKMIEVMFEKYGFDSTYIAIQAVLTLYAQGLISGVVVDSG
DGVTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRIMKE
KLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVGGERFEAPEALFQPHLINVEGA
GIAELVFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKNDT
EKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQKLQKI
SN"
misc_feature 271..1416
/gene="LOC111070698"
/note="nucleotide-binding domain (NBD) of actin-related
protein2 (Arp2) and similar proteins; Region:
ASKHA_NBD_Arp2; cd10220"
/db_xref="CDD:466821"
ORIGIN
1 cacgctggtg ccgtgttttt gtaccgccgc aaaaaaagaa aatcgaaata atatagctgc
61 tgtgtaacca ctatcccttt taaaacttat tagttgtgtt acattatgct aaagtattac
121 ctatcatagc acacagtaat tttcgagcag cggaaacacg agccttcccc caacattcgg
181 tgaaactcaa ctaagagcag accagagcag cagccgcgga cagtttccag ttccagttgg
241 tgccccaaaa aaatggatag caagggacgc aatgtcattg tctgtgataa cggcacaggg
301 tttgtgaagt gcggctatgc cggcagcaat ttccccgccc acattttccc ctcgatggtg
361 gggcgaccca ttatccgggc ggtgaacaaa ataggtgaca tcgaagtgaa ggatctgatg
421 gtcggcgatg aggcctcgca gctgcgatca ttactggagg tctcctatcc gatggagaac
481 ggcgtggtcc ggaactggga tgacatgtgt catgtgtggg actatacgtt cgggcccaag
541 aagatggaca tcgatccgac caacacaaag atactgctga cagagccacc catgaatccc
601 acaaagaatc gcgagaaaat gattgaggtg atgttcgaga agtacggctt cgattccaca
661 tacattgcca ttcaggctgt gctaacgcta tacgcccagg gcctgatatc gggcgttgtt
721 gtcgattccg gcgatggagt aacgcatatt tgtcctgtct atgaggagtt tgccctgcca
781 catttgacgc gtcgattgga tattgctgga cgtgatatca cccgctatct gattaagtta
841 cttttactac gtggatacgc cttcaatcat tccgctgact tcgaaacggt ccgaattatg
901 aaagagaagc tctgctacat tgggtacgac atcgagatgg agcaacgttt ggcgctggag
961 accacggtgc tggttgagtc ctatacgtta cccgatggcc gggtgatcaa ggtgggcggt
1021 gaacgattcg aggcacccga agcattattc caaccgcatt taatcaatgt cgagggcgct
1081 ggcattgcgg agctggtctt caatacgatc caagcggcgg acattgatat acggcccgag
1141 ctctacaagc atattgtcct gtctggtggc tccaccatgt atccgggtct gcccagtcga
1201 ttggagcgcg agatcaagca attgtatctg gagagagtgc tgaagaatga tacggaaaag
1261 ctggcgaaat ttaaaatacg cattgaggat ccaccgagac ggaaggatat ggtcttcatt
1321 ggcggcgccg ttctggcgga ggtgacaaag gatcgggacg gcttctggat gtccaagcaa
1381 gagtatcagg agcagggtct gaaagtattg caaaagctgc aaaagatcag taactaggag
1441 caggattctg attgagattg atagatgacg aggatgaaca agtgtagcct ttagttttga
1501 cattttcttt cggctttcgg aatggaattc aacgacatta ccggccgcca aatctaatca
1561 aattaaatcc gatagaaacg aaaggaaatg cctgttgcct atgtgctatg taaaacgtgt
1621 gtgaatgtgc ttttttcccc ctgttgtgtg attgaatgta tctccccctc cactgatgga
1681 tgtatcgcct aaccacaggc tgctcccttt gactcgctat ttcattctcg gatgattctg
1741 tgcccactgc cgccttcttt gtgtcaactt gaaatatatg tttaacgatt atctgattat
1801 gattatgtga ttaactacca cgtaacaagc ccacaacgcc tcgttcttta tttttcccac
1861 aatgtatatc cccccctccc atggcataaa gtgtattgat atttttttaa a