PREDICTED: Drosophila obscura actin-related protein 2
LOCUS XM_022361425 1927 bp mRNA linear INV 14-MAY-2021
(LOC111070698), transcript variant X1, mRNA.
ACCESSION XM_022361425
VERSION XM_022361425.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361425.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1927
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1927
/gene="LOC111070698"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 17 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 16 samples with support for all annotated
introns"
/db_xref="GeneID:111070698"
CDS 254..1453
/gene="LOC111070698"
/codon_start=1
/product="actin-related protein 2 isoform X1"
/protein_id="XP_022217117.1"
/db_xref="GeneID:111070698"
/translation="MDSKGRNVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRAV
NKIGDIEVKDLHVDDLMVGDEASQLRSLLEVSYPMENGVVRNWDDMCHVWDYTFGPKK
MDIDPTNTKILLTEPPMNPTKNREKMIEVMFEKYGFDSTYIAIQAVLTLYAQGLISGV
VVDSGDGVTHICPVYEEFALPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETV
RIMKEKLCYIGYDIEMEQRLALETTVLVESYTLPDGRVIKVGGERFEAPEALFQPHLI
NVEGAGIAELVFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYLERV
LKNDTEKLAKFKIRIEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQ
KLQKISN"
misc_feature 272..1432
/gene="LOC111070698"
/note="nucleotide-binding domain (NBD) of actin-related
protein2 (Arp2) and similar proteins; Region:
ASKHA_NBD_Arp2; cd10220"
/db_xref="CDD:466821"
ORIGIN
1 tcacgctggt gccgtgtttt tgtaccgccg caaaaaaaga aaatcgaaat aatatagctg
61 ctgtgtaacc actatccctt ttaaaactta ttagttgtgt tacattatgc taaagtatta
121 cctatcatag cacacagtaa ttttcgagca gcggaaacac gagccttccc ccaacattcg
181 gtgaaactca actaagagca gaccagagca gcagccgcgg acagtttcca gttccagttg
241 gtgccccaaa aaaatggata gcaagggacg caatgtcatt gtctgtgata acggcacagg
301 gtttgtgaag tgcggctatg ccggcagcaa tttccccgcc cacattttcc cctcgatggt
361 ggggcgaccc attatccggg cggtgaacaa aataggtgac atcgaagtga aggatttaca
421 tgtcgatgat ctgatggtcg gcgatgaggc ctcgcagctg cgatcattac tggaggtctc
481 ctatccgatg gagaacggcg tggtccggaa ctgggatgac atgtgtcatg tgtgggacta
541 tacgttcggg cccaagaaga tggacatcga tccgaccaac acaaagatac tgctgacaga
601 gccacccatg aatcccacaa agaatcgcga gaaaatgatt gaggtgatgt tcgagaagta
661 cggcttcgat tccacataca ttgccattca ggctgtgcta acgctatacg cccagggcct
721 gatatcgggc gttgttgtcg attccggcga tggagtaacg catatttgtc ctgtctatga
781 ggagtttgcc ctgccacatt tgacgcgtcg attggatatt gctggacgtg atatcacccg
841 ctatctgatt aagttacttt tactacgtgg atacgccttc aatcattccg ctgacttcga
901 aacggtccga attatgaaag agaagctctg ctacattggg tacgacatcg agatggagca
961 acgtttggcg ctggagacca cggtgctggt tgagtcctat acgttacccg atggccgggt
1021 gatcaaggtg ggcggtgaac gattcgaggc acccgaagca ttattccaac cgcatttaat
1081 caatgtcgag ggcgctggca ttgcggagct ggtcttcaat acgatccaag cggcggacat
1141 tgatatacgg cccgagctct acaagcatat tgtcctgtct ggtggctcca ccatgtatcc
1201 gggtctgccc agtcgattgg agcgcgagat caagcaattg tatctggaga gagtgctgaa
1261 gaatgatacg gaaaagctgg cgaaatttaa aatacgcatt gaggatccac cgagacggaa
1321 ggatatggtc ttcattggcg gcgccgttct ggcggaggtg acaaaggatc gggacggctt
1381 ctggatgtcc aagcaagagt atcaggagca gggtctgaaa gtattgcaaa agctgcaaaa
1441 gatcagtaac taggagcagg attctgattg agattgatag atgacgagga tgaacaagtg
1501 tagcctttag ttttgacatt ttctttcggc tttcggaatg gaattcaacg acattaccgg
1561 ccgccaaatc taatcaaatt aaatccgata gaaacgaaag gaaatgcctg ttgcctatgt
1621 gctatgtaaa acgtgtgtga atgtgctttt ttccccctgt tgtgtgattg aatgtatctc
1681 cccctccact gatggatgta tcgcctaacc acaggctgct ccctttgact cgctatttca
1741 ttctcggatg attctgtgcc cactgccgcc ttctttgtgt caacttgaaa tatatgttta
1801 acgattatct gattatgatt atgtgattaa ctaccacgta acaagcccac aacgcctcgt
1861 tctttatttt tcccacaatg tatatccccc cctcccatgg cataaagtgt attgatattt
1921 ttttaaa