PREDICTED: Drosophila obscura uncharacterized LOC111070697
LOCUS XM_022361424 1397 bp mRNA linear INV 14-MAY-2021
(LOC111070697), mRNA.
ACCESSION XM_022361424
VERSION XM_022361424.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq; corrected model; includes ab initio.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361424.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 1% of CDS bases
frameshifts :: corrected 1 indel
##RefSeq-Attributes-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-906 JAECWW010000165.1 549386-550291 c
907-1026 JAECWW010000165.1 549265-549384 c
1027-1397 JAECWW010000165.1 548832-549202 c
FEATURES Location/Qualifiers
source 1..1397
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1397
/gene="LOC111070697"
/note="The sequence of the model RefSeq transcript was
modified relative to its source genomic sequence to
represent the inferred CDS: deleted 1 base in 1 codon;
Derived by automated computational analysis using gene
prediction method: Gnomon. Supporting evidence includes
similarity to: 2 Proteins, and 98% coverage of the
annotated genomic feature by RNAseq alignments, including
12 samples with support for all annotated introns"
/db_xref="GeneID:111070697"
CDS 1..1374
/gene="LOC111070697"
/note="The sequence of the model RefSeq protein was
modified relative to its source genomic sequence to
represent the inferred CDS: deleted 1 base in 1 codon"
/codon_start=1
/product="LOW QUALITY PROTEIN: uncharacterized protein
LOC111070697"
/protein_id="XP_022217116.2"
/db_xref="GeneID:111070697"
/translation="MDNMSITRLKLLALLAFLLLGIGGVQAKYGDLAGNWLVDYGQAE
LRVFSDGSEQLQLHIYNVQPQDAALDYHFVVRSSDELRALANRTVPRQDFNASGSWLG
TVEVTGKRFGYSELLVELHTAGGAIESFPQPLPIAVLRDRVVDERVTTYVSAALALLM
FLNLGTVLDLQRLQGIVCRPVGPVVGIVSRFVLMPALGFGLGRALWPGQQPLQLALFY
TALAPSGGLANVCAVFLKGNINLSIATTTINSLLALAFMPLWIMVLGRLVYDDDELTV
PFGQLSGGAAALVACLAIGLLLRLCVPKTTLFIFRFLKPLSVVLSLCLVGLTVGLNWF
VFAEFTWQVLVAALCLPVAGYLATYLLSKLLCRSPTDALTLAIETSVLNMTMPIVLLQ
ASQLEQPQLDLILVVPIAASLLSLVLVIVFYGVRRCLGWNVRQDEHAFDHKQLMAEHD
EAVYQRP"
misc_feature 388..1266
/gene="LOC111070697"
/note="Predicted Na+-dependent transporter YfeH [General
function prediction only]; Region: YfeH; COG0385"
/db_xref="CDD:440154"
ORIGIN
1 atggacaaca tgtcgatcac tagactgaag ctcctggccc tcctggcatt cctcctgctg
61 ggaatcggcg gcgttcaggc caaatacggg gacttggccg gcaattggct ggtggattac
121 ggccaggccg agctccgtgt tttcagcgat ggaagcgagc agcttcagct gcacatttac
181 aatgtccagc cccaggatgc cgccttggac taccattttg tggtgcgctc aagcgacgag
241 ctgagggccc tggcaaacag gacggtaccc cgtcaggatt tcaatgccag cggcagttgg
301 ttggggacgg tggaagtgac gggcaaacgt ttcggttata gcgagctgct ggtggagctg
361 cacaccgctg gcggcgcaat cgagtcattc ccccagccac tgcccattgc ggtgttgcgg
421 gatcgcgttg tcgatgagcg cgtaaccaca tatgtgtcgg cggctctcgc cctgctgatg
481 ttcctcaatc tgggcaccgt gctggacctg caacgcctgc agggcatcgt gtgccggccc
541 gtgggtcctg tggtgggcat cgtcagtcgt ttcgtgctaa tgccagccct gggctttggc
601 ctaggccgtg ccctgtggcc ggggcagcag cccctccagc tggccctctt ttacactgct
661 ctggcaccca gcggcggtct ggccaatgtg tgcgccgttt tcctcaaggg gaacatcaac
721 ctgtcgattg ccaccaccac catcaacagc ctgctagcgc tggcatttat gccgctgtgg
781 atcatggtcc tgggccggct cgtctacgat gacgatgaac tgacggtgcc cttcggtcag
841 ctatctggcg gcgcggcggc tctggtagcc tgcctggcca ttggcctcct gctgcgcctc
901 tgcgtgccaa agacgacgct gtttatcttc cgcttcctca agccgctctc ggtggtgctc
961 agcctgtgtc tggtggggct gacggtgggc ctcaattggt ttgtctttgc cgagttcacc
1021 tggcaggtgc tggtggctgc tctctgcctg cccgttgccg gctatctggc cacctacttg
1081 ctgtccaagc tgctctgccg ctcgcccacc gatgccctga cactggccat cgagaccagt
1141 gtgctgaaca tgaccatgcc cattgtcctg ctgcaggcca gccagctgga gcagccgcag
1201 ctggatctca tcctggtggt gcccattgcg gcatcgctac tctccctagt gctcgtcatc
1261 gtcttctatg gggtgcgccg ctgcctcgga tggaatgtgc gccaggatga gcacgccttc
1321 gatcacaaac agctgatggc tgagcacgac gaggccgtct atcagcggcc ttgagaggcg
1381 tcgcttccgc tccactc