PREDICTED: Drosophila obscura mucin-19 (LOC111070677), mRNA.
LOCUS XM_022361393 2323 bp mRNA linear INV 14-MAY-2021
ACCESSION XM_022361393
VERSION XM_022361393.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361393.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2323
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2323
/gene="LOC111070677"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 5 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111070677"
CDS 396..1847
/gene="LOC111070677"
/codon_start=1
/product="mucin-19"
/protein_id="XP_022217085.2"
/db_xref="GeneID:111070677"
/translation="MNAKKRQRLDLGLDIDATTGGGAGAPKATAAPTTTTTTTTTATT
ASDLSDALLASSFGNGQSLFLTSTGNGSGGAQILLTICGDENSDESQEYYAIKQEPDM
DLNSLLPSNLQLPTGCEIYLVKDTTISSPMQLNGHTHTHTQTQTTHIQAQTIPPKATI
KLEPDSMSDRCGLTVNKLCTSSTNILYVSNGASDGKPSTNATATPERASGTPKPAVAA
TIAKVAAAAAAAPTTAATTTNTMRALKLIEEHVGGGGGGGGAGGAGSTASAVGTTMSG
TATSKLDAYKKRDDKRRATHNEVERRRRDKINCWIFKLKEMLPIEGSRYRPPPPSNGQ
MEPVSISLSSSTSEASTSPGLRVNQSANGRTPPNDSKSQILIKACEYIKSMQGEIDNL
REGLREADKLRVTNKTLRDELNSLKRQQELQERFHSNGGGSFNVTLNSLNSSATSDLF
DGIDGPHHGMGMSMGMGMGAFGKRGLMIADYDE"
misc_feature 1257..1553
/gene="LOC111070677"
/note="basic Helix Loop Helix (bHLH) domain superfamily;
Region: bHLH_SF; cl00081"
/db_xref="CDD:469605"
misc_feature order(1293..1298,1302..1304,1317..1319,1503..1508)
/gene="LOC111070677"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:381494"
misc_feature order(1311..1316,1323..1328,1332..1337,1347..1349,
1506..1511,1518..1523,1530..1532,1536..1541,1548..1553)
/gene="LOC111070677"
/note="dimer interface [polypeptide binding]; other site"
/db_xref="CDD:381494"
ORIGIN
1 atatcaatta acgtaatgaa gcccaaacaa tcgttgttgt taacaattcg tgttgttaaa
61 tggcaacgca aatgcgtcaa aagtcgccgt tgagccctct aatcgcgaag aacctggtgg
121 ccaaacatca ccgcggcagt taatatccaa aatcaaggcg ggcatacagc aacaagcatt
181 gctgcattcg cagcgcagaa gagtgccagg ccaagtgcca gcgcgactcg ggcctgggga
241 gccacaaact ccaattggac cgatcccatt cgatccgatt cccaacccga ttagagttac
301 gtgagctggg cgctggagaa agtatacgaa aaccgagtaa caaaagcaga tttcgttgcc
361 tgccagatga caacagtcga acgtccgttg acgctatgaa cgccaagaaa cgtcaacgcc
421 tggacctggg gctggacatt gatgccacaa caggaggagg agcaggtgca ccaaaagcaa
481 ctgccgctcc aacgaccaca acaacaacaa caacaacagc aacgactgca agtgacttat
541 ccgatgcttt gttggccagt tcgtttggca acggccagag cctgttcctg accagcaccg
601 gcaatggcag tggcggtgcc cagatcctat tgaccatctg cggtgacgag aactcggatg
661 agtcgcagga gtattatgcc atcaagcagg agcccgatat ggatttgaac tcgctgctgc
721 caagcaacct acagctgccc actggctgtg agatatatct ggtgaaggac accaccatca
781 gttcgcccat gcagctcaat ggacataccc atacccatac acagacccag acgacccaca
841 ttcaagccca gaccattcca ccaaaggcaa ccatcaaact ggagccggat tcgatgagcg
901 accgctgtgg tctcactgta aataagctct gcacatcgtc cacgaacatc ctctacgtga
961 gtaatggcgc cagtgacggg aagccctcca caaatgcgac tgcaacgcca gagagagcat
1021 caggcacacc aaaaccagct gtggcggcaa cgatagccaa agtggccgcc gccgccgccg
1081 ccgcacccac aacagccgcc acaactacaa acacaatgcg tgctctaaaa ctaatcgagg
1141 agcatgtggg tggaggagga ggaggaggtg gagcaggggg tgctggtagc acggccagtg
1201 cggttggtac aacgatgtct ggcactgcca cctccaaatt ggatgcgtac aagaagcggg
1261 acgacaagcg tcgtgccacg cacaatgagg tggagcgtag acgtcgcgac aaaatcaatt
1321 gctggatctt caagctgaag gagatgctgc ccatcgaggg cagccgctac cggccaccgc
1381 caccaagcaa tgggcaaatg gagccggtga gcataagcct cagttcgagc accagcgagg
1441 ccagcaccag tcccggcctg agagtcaacc agagcgccaa tggacggacg ccgcccaacg
1501 actccaagtc gcagatattg atcaaggcct gtgagtacat caagagcatg cagggcgaga
1561 tagacaactt acgcgagggc ctgcgtgagg cggacaagct gcgtgtgacc aataagacgc
1621 tgcgggatga gctgaacagc ttgaagcgac agcaggagct gcaggagcgc ttccacagca
1681 acggcggtgg atcgtttaat gtgacactga attcgttgaa tagctcggct accagtgacc
1741 tgttcgatgg catagatggg ccacaccatg gcatgggcat gagcatgggc atgggcatgg
1801 gggcctttgg caagcgcggt ctcatgatag ccgattacga tgaatagaat atatacggta
1861 taggaggggt tttggcgcta gcgctggcgc tgggtcgtcc cccgccgaac caccatacac
1921 cgccccagcc tcaaacatcc tccaaagaat gacgtaccac acgtaccacg tacaataaaa
1981 acaaattgga aagacaagtg atttttcttg ttatcgctgt taaataatta aatatatata
2041 tatatatagg aaaaaaaact acatatatta taaattaatg tataattagt tttttttatt
2101 gattgttttg tttgaagcac acggatcctc attttacaat tgtttgccat gtcaactttt
2161 agtgctgttt gccataaacc taaactaacc tcggcatccc ccttccatat agtaactata
2221 atattaatga aaccgttact taagcatcac aatttatgcc attttttcca catttacaag
2281 aaacattatt atatacctgt ccctccccct aaaaaaatat atg