PREDICTED: Drosophila obscura regucalcin (LOC111070672), transcript
LOCUS XM_022361388 1121 bp mRNA linear INV 14-MAY-2021
variant X3, mRNA.
ACCESSION XM_022361388
VERSION XM_022361388.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361388.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1121
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1121
/gene="LOC111070672"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 23 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111070672"
CDS 109..1020
/gene="LOC111070672"
/codon_start=1
/product="regucalcin isoform X2"
/protein_id="XP_022217080.1"
/db_xref="GeneID:111070672"
/translation="MSYKVEPLPDSYAGLGEGPHWDVATQSLYYVDLEAGKLLRYDFK
QNKVYATQIEGESFAAFVLPIEGKPQEFAVGCARRVVIVKWDGVSPVAKVVRTLFEVQ
PELEKNRLNDAKADPRGRFFGGTMRYIGDEFEFRHGELYKWEAGGQVSIVKGDVGISN
GLAWDEKAKKFYYIDTTDYEVKSYDYDFDTGVSSNPKVVFNLRKTSPKDHLLPDGLTI
DTEGNLYVATFNGATIFKVNPNTGKVLLEIKFPTKQITSAAFGGPNLDILYVTTAAKF
DQPAPAGTTYKVTGLNATGYPGTYLKA"
misc_feature 151..930
/gene="LOC111070672"
/note="SMP-30/Gluconolactonase/LRE-like region; Region:
SGL; pfam08450"
/db_xref="CDD:462480"
ORIGIN
1 caaaaaccac aacaaccaga ccaggcattt taacatcaaa agtcaattaa aatacgtaaa
61 aacaaacgca agcaaagtta atcgcaacgc cgacgctgct gctgctgaat gtcctacaaa
121 gttgaaccac tgcctgactc ctatgccggc ctaggcgagg gaccccactg ggatgtggcc
181 acccagagct tgtactacgt ggacttggag gctggcaaac tccttcgcta cgacttcaag
241 cagaacaagg tttacgcgac ccagattgag ggcgagagtt tcgctgcctt tgtcctgccg
301 attgagggca agccccagga gtttgccgtt ggctgtgctc gtcgcgtggt cattgtaaaa
361 tgggatggtg tctcgccagt ggccaaggtg gtacgcaccc tattcgaggt gcagccggag
421 ctcgagaaga atcgcttgaa cgacgccaag gccgatcccc gtggccgatt ctttggcggc
481 accatgcgct acattggcga cgagtttgaa ttccgtcacg gtgagctcta caagtgggag
541 gctggcggcc aggtgtccat tgtcaagggc gatgtgggca tctccaacgg cctggcctgg
601 gacgagaagg ccaagaagtt ctactacatc gacaccaccg actacgaggt caagtcgtac
661 gactatgact tcgacacagg cgtgtccagc aaccccaagg tggtcttcaa cttgcgcaag
721 accagtccca aggatcatct gcttcccgac ggtctcacca tcgacaccga gggtaatctc
781 tatgtggcca cattcaacgg tgccaccatt ttcaaagtca acccaaacac tggcaaggtc
841 ctgctggaga tcaagtttcc caccaagcag atcacctcgg ctgcctttgg tggccccaac
901 ctggacattc tatatgtgac aacagcggcc aagttcgacc agccggcccc agcaggcacc
961 acctataagg tgacgggcct gaatgccact ggctatccag gcacctatct gaaggcctag
1021 gtaataccaa atcctaaatc acaatttttt ttaaacttca aaaatgcatc acaaatctaa
1081 tccaagtgca ataaaatgtt ataattatta atcaaacaaa a