PREDICTED: Drosophila obscura protein DDI1 homolog 2
LOCUS XM_022361384 2157 bp mRNA linear INV 14-MAY-2021
(LOC111070671), transcript variant X2, mRNA.
ACCESSION XM_022361384
VERSION XM_022361384.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361384.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2157
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2157
/gene="LOC111070671"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 2 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 16 samples with support for all annotated
introns"
/db_xref="GeneID:111070671"
CDS 258..1715
/gene="LOC111070671"
/codon_start=1
/product="protein DDI1 homolog 2"
/protein_id="XP_022217076.2"
/db_xref="GeneID:111070671"
/translation="MKITVTASDDRLFCLDVSHDLELENLKALCAMEIGADVDQIIVR
LNGRELTNNKHSLQQCGVNDGDFIMLERRRPNNRAGGANNPVISGLDFSSIAVPGSSA
TTSGGSPPSMPNPSLGGVAGWGGLGAGNSLQQQQQQQQQMQNLTDIPMTDDFNVNFED
DPATVRQLLLSSPDTLALLREYNTRLAEALDSGDPDTFARALREHVTERKRRNDQRVR
MLTADPFDEETQRLIAEEIKQKNIQDNMAAAIEYNPEIFGMVTMLYINCKVNGVPVKA
FVDSGAQTTIMSKDCAERCHVNRLIDTRWNGVAKGVGTQPILGRIHMVQLQIENDHLT
SSFTVLGQQPMDMLLGLDMLKRHQCLIDLQRNLLIIGTTGTTTPFLPESELPVGARLT
GNPDEQTEQQAIAEAMEQSRKEGASTSASASAGQGANTIQPMDRFTEQDVSDLMALGF
PRRDVLIVLRQCGGNKQVASSLLLSRNEAAGGGLS"
misc_feature 258..473
/gene="LOC111070671"
/note="ubiquitin-like (Ubl) domain found in the eukaryotic
Ddi1 family; Region: Ubl_Ddi1_like; cd01796"
/db_xref="CDD:340494"
misc_feature 996..1355
/gene="LOC111070671"
/note="retropepsin-like domain of DNA damage inducible
protein; Region: RP_DDI; cd05479"
/db_xref="CDD:133146"
misc_feature 1092..1100
/gene="LOC111070671"
/note="catalytic motif [active]"
/db_xref="CDD:133146"
misc_feature 1092..1094
/gene="LOC111070671"
/note="Catalytic residue [active]"
/db_xref="CDD:133146"
misc_feature 1572..1679
/gene="LOC111070671"
/note="UBA domain-like superfamily; Region: UBA_like_SF;
cl21463"
/db_xref="CDD:473871"
ORIGIN
1 agggttttca aaaaaaaaaa aatgctcccg agtgtgtttt gtgaataata tccattcatc
61 gatatcaatc tgaatgcaac ccattacatc gcatcgcatc gcagcggcgt ttatgttagg
121 cagtcgtccc ccaacagaga atccttccaa aacagtgttt gtgcgcaatc aatcgaccca
181 gaccagaccc acggagttta gtgaaacacc ccacaccata catcccatca aatcaagccc
241 cagcggtctc tcgcactatg aaaatcacag tgactgcctc cgatgatcgg cttttctgct
301 tggacgtgtc ccacgatctc gagctggaga acctcaaagc cctctgtgcg atggagatcg
361 gggccgatgt cgatcaaatt atcgtccgct tgaatggccg ggagctgacg aacaacaagc
421 attcgctgca gcagtgcggc gtcaacgatg gggactttat catgctggag cgaagaaggc
481 ccaacaatcg cgcagggggt gccaacaatc cggtaataag tggactggac tttagcagta
541 tcgctgtgcc gggatccagt gcaacgacca gtggcggtag cccaccctca atgcccaacc
601 ccagcctggg aggagtggca ggatggggtg gactgggagc aggcaacagt ttgcagcagc
661 agcagcaaca acagcagcag atgcagaacc taacagacat cccaatgacg gacgatttca
721 atgtgaactt cgaagacgat ccggcgacgg tgaggcagtt gttattgtcc agcccggata
781 cactggccct gctgagggag tataatacgc ggctagcgga ggccctcgat tcgggggatc
841 cggacacgtt tgcccgggct ctcagggagc atgtgacgga gcggaagcgg cgcaacgatc
901 agcgggtgcg aatgctgaca gcggatccgt tcgatgagga gacgcagcgt ctgattgctg
961 aggagataaa gcagaagaac attcaggaca atatggcggc ggccattgaa tacaatccgg
1021 agatcttcgg catggtcacg atgctctaca tcaactgcaa ggtaaacggt gtgccggtga
1081 aggccttcgt tgactctgga gcccagacga caatcatgag caaggactgt gccgaaaggt
1141 gtcacgtgaa ccggctgatt gacacgcgct ggaatggtgt cgccaagggt gtgggcactc
1201 agcccattct gggcagaatc cacatggttc agctgcagat cgagaacgat catttgacgt
1261 ccagcttcac cgttcttggc caacagccca tggacatgtt gctgggtctg gatatgctca
1321 agcgtcatca gtgtctcatc gatctgcaga ggaatcttct gattattggc accaccggaa
1381 cgacaacacc atttctaccc gaaagcgagc taccggttgg ggcccggctc acgggcaatc
1441 cagacgagca gaccgaacag caggcgattg ccgaggccat ggagcagagt cggaaggagg
1501 gtgcctccac atccgcatcc gcctcggcag ggcagggcgc gaataccatc cagccaatgg
1561 atcgatttac cgagcaggat gtcagcgatc tcatggccct cggctttccg cgccgcgatg
1621 ttctcattgt gctgaggcag tgtggtggca ataagcaggt ggcgagctca cttctgctca
1681 gccgcaacga ggcagccggt ggcggactta gctgaactcg ggctggagcc ccctgtcccc
1741 ccatacccaa gctctgccca tcccaccaca aacgccacag acacctcctc ctactccgcc
1801 tcctcctacg caccacaatt cactcctatg ggatcaatcg taacaaaaac aacatgaaaa
1861 ccaacacaag gatatgatga cgagcaatca cagccagcta gccagccaga cagacagaca
1921 cgacagacag ccagccacta tattccgttt caacgaaata ctctgagcaa taccaaaacg
1981 aaaatggaaa atggataaaa ttaaatttgt aatttaggga aatttttgta aactaattat
2041 gcctcttttt tatatgaatc gttatacaca atagctaaat agtaggatga gtatgcattt
2101 gggcgacgcg cgacaccctc ctccaaaaca cacacgagag gacgcgaata gtagggt