PREDICTED: Drosophila obscura regulator of telomere elongation
LOCUS XM_022361343 3517 bp mRNA linear INV 14-MAY-2021
helicase 1 homolog (LOC111070652), mRNA.
ACCESSION XM_022361343
VERSION XM_022361343.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022361343.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..3517
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..3517
/gene="LOC111070652"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 3 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 16 samples with support for all annotated
introns"
/db_xref="GeneID:111070652"
CDS 409..3399
/gene="LOC111070652"
/codon_start=1
/product="regulator of telomere elongation helicase 1
homolog"
/protein_id="XP_022217035.2"
/db_xref="GeneID:111070652"
/translation="MPESVIAGIPVHFPFEPYDVQRAYMEKVIICLRDGTNGVLESPT
GTGKTLSLLCASLAWIRTRQSEHQQQMIKLKATSKEGGSGPGGDLSELAMTVGKANNW
GVPKVIYASRTHSQLSQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMKEQGNSNKVN
LCKLRVHSKTCSFQLRVESKKDHPDFRGPSIMDIEDLVRVGQKLKMCPYFASKELVAQ
ADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIRSSDVAMAI
EDVTHIMKVFTSGESQDAGGDEPKDFTLDDLTLLKEMLLELEKAIDAVVVDNPTDGTT
YPASLMYELLGKANFTYGNCATIVALLDKLVQYLMVASQHMTIRKGGTFLMLSDLLTI
VFANKESIMSKVHLSFKVHVQVEEANKQQGKGGAAPQGKPQQGWLSKGNITTTGVSNK
AAKIVNFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIV
DQSQVYVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYP
MLNKCVDAWQASGLWADISCKKPIFLEPRGKDQFTSTMEEFYQAIRDSKGAVFMAVCR
GKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLEANRTKENQLLSGQEWYNL
DATRAVNQAIGRVIRHRNDYGAILLCDSRFQDASQVQQLSKWIRGHLGARPQSSPFGP
IVRELRQFFKNAEQTMKQPDVREEEQPLMNVCKVEEDEPLPVIPTIKRDPGNNATFRK
ANETAIKVEMANSINSWTPADYASAAGRTLGHAAPNAMDFMSRLDSNVSSIDFNCSEN
GSSSSSGNGSGLVKIHKRERSSPSANDSVATQATKKRYKLVENIKTEPSSQSQAKVAP
VSRADFLRELRSVVNQDQFRDFGKVLIEYKNGTDENFEALMAVLLEILSAPKMRYLLL
GMRRFLRNEHKAEFDVRLANLNLA"
misc_feature 436..2637
/gene="LOC111070652"
/note="DNA repair helicase (rad3); Region: rad3;
TIGR00604"
/db_xref="CDD:273169"
misc_feature 3121..3396
/gene="LOC111070652"
/note="harmonin_N_like domain of regulator of telomere
elongation helicase 1 (also known as RTEL); Region:
HN_RTEL1; cd13932"
/db_xref="CDD:259826"
misc_feature order(3148..3150,3157..3159,3169..3171,3208..3210,
3217..3219,3226..3231,3238..3240)
/gene="LOC111070652"
/note="putative protein binding site [polypeptide
binding]; other site"
/db_xref="CDD:259826"
ORIGIN
1 gtcttcctct tgtgctgctc cagcgccata caacctcgcc gttcaaacgg taaaaactga
61 atgagcctcc gcgattgttg atgtttatcg attctcgagc agctgactgg gctgccagag
121 caccagcatc tatcagagct gtctctgccc cgattgccat caactaatac gcaaacagca
181 aacaaaacgc gttaatatgc aacaaaaata gtgaaactgt cgtattaatt gcgtcctgga
241 gcagttctgt ttgtttattt ccgcagtacg ccttcccacc taccatattc cgagtctggc
301 aaacagctgt ttggtggcct atcgaaacac atttgctcgc cgctttggcg cgcgaaaaac
361 ctcgggggca tataatcacg gaacaacacc aaacagagcg cagacaaaat gccggagagt
421 gtgattgccg gcataccggt gcattttccc ttcgagccgt acgatgtgca gcgtgcctat
481 atggagaagg tgatcatttg cctgcgggat ggcacaaacg gcgtcctcga gtcgccaacg
541 ggcaccggca agacgctgag tctgctctgc gcctccctgg cctggatacg cacgcgacag
601 tcggagcacc agcagcagat gattaagctg aaggcgacca gcaaggaagg tggatccggt
661 ccgggcggag atcttagcga gctggccatg accgtgggca aggcgaacaa ttggggcgta
721 ccgaaggtga tctacgcctc gcgcacccac tcccagctga gccaggccat gcgcgagcta
781 aagcggaccg cctacgcgaa catgcggtcg gtggtgctgg gctcgcggga ccagctgtgc
841 atccacccgg aggtgatgaa ggagcagggc aactccaaca aggtgaacct ctgcaagctg
901 cgcgtccact cgaaaacctg ctccttccag ctgcgcgtcg agtcgaagaa ggaccatccg
961 gacttccgtg ggcccagcat catggatatc gaggatctgg tgagggtcgg ccagaagcta
1021 aagatgtgcc cctactttgc ctccaaggag ctggtcgccc aggcggacat cacgtttatg
1081 ccgtacaact atctgctgga cccgaaggcg cgcaaggcca acaagattga gctggggaat
1141 acgatcgtaa tcctggacga ggcgcacaac atcgagaaga tctgcgagga gtccgcctcg
1201 gtgcagatac gctcctccga tgtggccatg gccatcgagg atgtcacgca catcatgaag
1261 gtcttcacca gcggcgaatc gcaggacgct ggcggcgatg aacccaaaga ctttaccctg
1321 gacgatctca cgctgctcaa ggagatgctc ctcgagctgg agaaggccat cgatgcagtg
1381 gtggtcgata atcccacgga tggcaccacc tatcccgcct ccctgatgta cgagctgctc
1441 ggcaaggcga acttcacgta cggcaactgc gccaccattg tggcgctgct ggacaagctg
1501 gtgcagtatc tgatggtcgc ctcgcagcac atgaccatcc gcaagggtgg caccttcttg
1561 atgctcagcg atctgctgac cattgtgttc gccaacaagg agagcatcat gagcaaggtc
1621 catctcagct tcaaggtgca cgtgcaggtg gaggaggcca acaagcagca gggcaagggt
1681 ggcgcagcgc cccagggcaa gccccagcag ggctggctaa gcaagggcaa catcacgacg
1741 acgggcgtca gcaacaaggc ggcgaagata gtcaatttct ggtgcttcaa tcccggcttt
1801 ggcatggagc agctgctcaa cacccaggtg cgcagcgtca tcctaaccag cggcacgctg
1861 gcacccctaa aaccgttgat cgccgagctg gccataccgg tggcccagca tctggagaat
1921 ccccacatag tcgaccagtc gcaggtctat gtgaaaatca ttggcactgg cccggaccga
1981 cagcagttga tatccaattt taagaatcgg gacaatccca agtacattag ctcgctgggc
2041 cagactattc tgaatgtgtc gcgcatcgtg ccggacggac tgctggtgtt ctttccctcc
2101 tatccgatgc tgaacaaatg cgtggacgca tggcaagcca gcggcctgtg ggcggacatc
2161 tcgtgcaaga agcccatttt cctggagcca cgcggcaagg atcagttcac cagcaccatg
2221 gaggagttct atcaggcgat acgcgactcc aagggtgccg ttttcatggc cgtctgtcgg
2281 ggcaaagtgt ccgagggcct ggactttgcc gatcgcaatg gacgggccgt catcatcact
2341 gggctgccct ttcccccgct taaggacccc aaggtgatac tgaaacggcg gtacctggag
2401 gcgaatcgca ccaaggagaa ccagctgctc agcggccagg aatggtacaa cttggatgcc
2461 acgcgagccg tcaatcaggc aattggtcgc gtcattcggc atcggaacga ctacggtgcc
2521 attctgctgt gcgactcgcg tttccaggac gcatcccagg tccagcagct atccaaatgg
2581 atacgcggcc atctgggtgc gcggccgcag agctcgccgt ttggtcccat tgtgcgcgag
2641 ctgcggcagt ttttcaagaa tgccgagcaa acgatgaagc agccggatgt gcgggaggag
2701 gaacagccac tgatgaacgt ctgcaaagtg gaggaggatg agccgctgcc tgtcataccg
2761 acaatcaaac gagatccagg aaacaatgcc acattccgca aggccaacga aacggccata
2821 aaggtggaga tggccaactc tatcaattcg tggacaccgg cagactatgc cagcgccgcg
2881 ggtcgtaccc tgggccatgc agcacccaat gccatggatt ttatgagtcg cctggactcg
2941 aatgtctcga gcatagactt caactgcagt gagaatggca gcagcagcag cagcggcaac
3001 ggcagtggtc tcgtgaagat ccataaaagg gagcgcagct cacccagcgc caacgattca
3061 gtcgccacac aagccactaa aaagcgctac aaattggtgg aaaatatcaa aacggagccc
3121 agcagtcaga gtcaggcgaa ggtggcgccc gtatcgcggg cagactttct gcgcgagcta
3181 cggagtgtcg tcaatcaaga tcaatttcgg gattttggca aagtgctgat tgaatacaaa
3241 aacggcaccg acgagaattt cgaggccctg atggctgtgc tcctggagat tctgtcggca
3301 cccaaaatgc gttaccttct cctgggcatg cgtcgttttc tgaggaacga gcacaaggcc
3361 gagttcgatg tgcgactcgc caacctcaat ttagcctaac aatccatgtc caaatgaatg
3421 aatccttcga ttcagtattc aaaattgtgt gttcaaagag cggcgggggc aggggacctt
3481 tatatcttgt aatttagttt ttgttgctgt ctttttt