Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_022361343 3517 bp mRNA linear INV 14-MAY-2021 helicase 1 homolog (LOC111070652), mRNA. ACCESSION XM_022361343 VERSION XM_022361343.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022361343.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3517 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..3517 /gene="LOC111070652" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns" /db_xref="GeneID:111070652" CDS 409..3399 /gene="LOC111070652" /codon_start=1 /product="regulator of telomere elongation helicase 1 homolog" /protein_id="XP_022217035.2" /db_xref="GeneID:111070652" /translation="MPESVIAGIPVHFPFEPYDVQRAYMEKVIICLRDGTNGVLESPT GTGKTLSLLCASLAWIRTRQSEHQQQMIKLKATSKEGGSGPGGDLSELAMTVGKANNW GVPKVIYASRTHSQLSQAMRELKRTAYANMRSVVLGSRDQLCIHPEVMKEQGNSNKVN LCKLRVHSKTCSFQLRVESKKDHPDFRGPSIMDIEDLVRVGQKLKMCPYFASKELVAQ ADITFMPYNYLLDPKARKANKIELGNTIVILDEAHNIEKICEESASVQIRSSDVAMAI EDVTHIMKVFTSGESQDAGGDEPKDFTLDDLTLLKEMLLELEKAIDAVVVDNPTDGTT YPASLMYELLGKANFTYGNCATIVALLDKLVQYLMVASQHMTIRKGGTFLMLSDLLTI VFANKESIMSKVHLSFKVHVQVEEANKQQGKGGAAPQGKPQQGWLSKGNITTTGVSNK AAKIVNFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIV DQSQVYVKIIGTGPDRQQLISNFKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYP MLNKCVDAWQASGLWADISCKKPIFLEPRGKDQFTSTMEEFYQAIRDSKGAVFMAVCR GKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLEANRTKENQLLSGQEWYNL DATRAVNQAIGRVIRHRNDYGAILLCDSRFQDASQVQQLSKWIRGHLGARPQSSPFGP IVRELRQFFKNAEQTMKQPDVREEEQPLMNVCKVEEDEPLPVIPTIKRDPGNNATFRK ANETAIKVEMANSINSWTPADYASAAGRTLGHAAPNAMDFMSRLDSNVSSIDFNCSEN GSSSSSGNGSGLVKIHKRERSSPSANDSVATQATKKRYKLVENIKTEPSSQSQAKVAP VSRADFLRELRSVVNQDQFRDFGKVLIEYKNGTDENFEALMAVLLEILSAPKMRYLLL GMRRFLRNEHKAEFDVRLANLNLA" misc_feature 436..2637 /gene="LOC111070652" /note="DNA repair helicase (rad3); Region: rad3; TIGR00604" /db_xref="CDD:273169" misc_feature 3121..3396 /gene="LOC111070652" /note="harmonin_N_like domain of regulator of telomere elongation helicase 1 (also known as RTEL); Region: HN_RTEL1; cd13932" /db_xref="CDD:259826" misc_feature order(3148..3150,3157..3159,3169..3171,3208..3210, 3217..3219,3226..3231,3238..3240) /gene="LOC111070652" /note="putative protein binding site [polypeptide binding]; other site" /db_xref="CDD:259826" ORIGIN 1 gtcttcctct tgtgctgctc cagcgccata caacctcgcc gttcaaacgg taaaaactga 61 atgagcctcc gcgattgttg atgtttatcg attctcgagc agctgactgg gctgccagag 121 caccagcatc tatcagagct gtctctgccc cgattgccat caactaatac gcaaacagca 181 aacaaaacgc gttaatatgc aacaaaaata gtgaaactgt cgtattaatt gcgtcctgga 241 gcagttctgt ttgtttattt ccgcagtacg ccttcccacc taccatattc cgagtctggc 301 aaacagctgt ttggtggcct atcgaaacac atttgctcgc cgctttggcg cgcgaaaaac 361 ctcgggggca tataatcacg gaacaacacc aaacagagcg cagacaaaat gccggagagt 421 gtgattgccg gcataccggt gcattttccc ttcgagccgt acgatgtgca gcgtgcctat 481 atggagaagg tgatcatttg cctgcgggat ggcacaaacg gcgtcctcga gtcgccaacg 541 ggcaccggca agacgctgag tctgctctgc gcctccctgg cctggatacg cacgcgacag 601 tcggagcacc agcagcagat gattaagctg aaggcgacca gcaaggaagg tggatccggt 661 ccgggcggag atcttagcga gctggccatg accgtgggca aggcgaacaa ttggggcgta 721 ccgaaggtga tctacgcctc gcgcacccac tcccagctga gccaggccat gcgcgagcta 781 aagcggaccg cctacgcgaa catgcggtcg gtggtgctgg gctcgcggga ccagctgtgc 841 atccacccgg aggtgatgaa ggagcagggc aactccaaca aggtgaacct ctgcaagctg 901 cgcgtccact cgaaaacctg ctccttccag ctgcgcgtcg agtcgaagaa ggaccatccg 961 gacttccgtg ggcccagcat catggatatc gaggatctgg tgagggtcgg ccagaagcta 1021 aagatgtgcc cctactttgc ctccaaggag ctggtcgccc aggcggacat cacgtttatg 1081 ccgtacaact atctgctgga cccgaaggcg cgcaaggcca acaagattga gctggggaat 1141 acgatcgtaa tcctggacga ggcgcacaac atcgagaaga tctgcgagga gtccgcctcg 1201 gtgcagatac gctcctccga tgtggccatg gccatcgagg atgtcacgca catcatgaag 1261 gtcttcacca gcggcgaatc gcaggacgct ggcggcgatg aacccaaaga ctttaccctg 1321 gacgatctca cgctgctcaa ggagatgctc ctcgagctgg agaaggccat cgatgcagtg 1381 gtggtcgata atcccacgga tggcaccacc tatcccgcct ccctgatgta cgagctgctc 1441 ggcaaggcga acttcacgta cggcaactgc gccaccattg tggcgctgct ggacaagctg 1501 gtgcagtatc tgatggtcgc ctcgcagcac atgaccatcc gcaagggtgg caccttcttg 1561 atgctcagcg atctgctgac cattgtgttc gccaacaagg agagcatcat gagcaaggtc 1621 catctcagct tcaaggtgca cgtgcaggtg gaggaggcca acaagcagca gggcaagggt 1681 ggcgcagcgc cccagggcaa gccccagcag ggctggctaa gcaagggcaa catcacgacg 1741 acgggcgtca gcaacaaggc ggcgaagata gtcaatttct ggtgcttcaa tcccggcttt 1801 ggcatggagc agctgctcaa cacccaggtg cgcagcgtca tcctaaccag cggcacgctg 1861 gcacccctaa aaccgttgat cgccgagctg gccataccgg tggcccagca tctggagaat 1921 ccccacatag tcgaccagtc gcaggtctat gtgaaaatca ttggcactgg cccggaccga 1981 cagcagttga tatccaattt taagaatcgg gacaatccca agtacattag ctcgctgggc 2041 cagactattc tgaatgtgtc gcgcatcgtg ccggacggac tgctggtgtt ctttccctcc 2101 tatccgatgc tgaacaaatg cgtggacgca tggcaagcca gcggcctgtg ggcggacatc 2161 tcgtgcaaga agcccatttt cctggagcca cgcggcaagg atcagttcac cagcaccatg 2221 gaggagttct atcaggcgat acgcgactcc aagggtgccg ttttcatggc cgtctgtcgg 2281 ggcaaagtgt ccgagggcct ggactttgcc gatcgcaatg gacgggccgt catcatcact 2341 gggctgccct ttcccccgct taaggacccc aaggtgatac tgaaacggcg gtacctggag 2401 gcgaatcgca ccaaggagaa ccagctgctc agcggccagg aatggtacaa cttggatgcc 2461 acgcgagccg tcaatcaggc aattggtcgc gtcattcggc atcggaacga ctacggtgcc 2521 attctgctgt gcgactcgcg tttccaggac gcatcccagg tccagcagct atccaaatgg 2581 atacgcggcc atctgggtgc gcggccgcag agctcgccgt ttggtcccat tgtgcgcgag 2641 ctgcggcagt ttttcaagaa tgccgagcaa acgatgaagc agccggatgt gcgggaggag 2701 gaacagccac tgatgaacgt ctgcaaagtg gaggaggatg agccgctgcc tgtcataccg 2761 acaatcaaac gagatccagg aaacaatgcc acattccgca aggccaacga aacggccata 2821 aaggtggaga tggccaactc tatcaattcg tggacaccgg cagactatgc cagcgccgcg 2881 ggtcgtaccc tgggccatgc agcacccaat gccatggatt ttatgagtcg cctggactcg 2941 aatgtctcga gcatagactt caactgcagt gagaatggca gcagcagcag cagcggcaac 3001 ggcagtggtc tcgtgaagat ccataaaagg gagcgcagct cacccagcgc caacgattca 3061 gtcgccacac aagccactaa aaagcgctac aaattggtgg aaaatatcaa aacggagccc 3121 agcagtcaga gtcaggcgaa ggtggcgccc gtatcgcggg cagactttct gcgcgagcta 3181 cggagtgtcg tcaatcaaga tcaatttcgg gattttggca aagtgctgat tgaatacaaa 3241 aacggcaccg acgagaattt cgaggccctg atggctgtgc tcctggagat tctgtcggca 3301 cccaaaatgc gttaccttct cctgggcatg cgtcgttttc tgaggaacga gcacaaggcc 3361 gagttcgatg tgcgactcgc caacctcaat ttagcctaac aatccatgtc caaatgaatg 3421 aatccttcga ttcagtattc aaaattgtgt gttcaaagag cggcgggggc aggggacctt 3481 tatatcttgt aatttagttt ttgttgctgt ctttttt