PREDICTED: Drosophila obscura DNA repair protein complementing XP-A
LOCUS XM_022354927 1161 bp mRNA linear INV 14-MAY-2021
cells homolog (LOC111066372), mRNA.
ACCESSION XM_022354927
VERSION XM_022354927.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022354927.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1161
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1161
/gene="LOC111066372"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 6 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111066372"
CDS 94..972
/gene="LOC111066372"
/codon_start=1
/product="DNA repair protein complementing XP-A cells
homolog"
/protein_id="XP_022210619.2"
/db_xref="GeneID:111066372"
/translation="MSEETAAAAVVVAPSTLTTAQKSRIERNLAKAQRLREAKLVSHP
YKELGNHLGDTQPEGGPSQGSSVIKVQGTKYIDSGGGFLLEQPVLPAAGAGAADKPED
GAVANFVDDAIAIPVVFEECLECGEPFADSYLFTNFGHSVCDKCRDNEERHSLITRTE
AKAEYLLKDCDFDKREPKLRYISRKNPHNVRWGEMKLYLHSQVQKRAMEVWGSEEELV
RQHEGREEKREVGKARKYNKQMKQLRMEVRSSIYTKKTHAIHEHEFGPDTYNEEEDEY
THTCLTCPYTETYEKM"
misc_feature 457..969
/gene="LOC111066372"
/note="DNA repair protein; Region: rad14; TIGR00598"
/db_xref="CDD:273164"
ORIGIN
1 tatgtgaatg ccaattgtgg aggaagcaga gaaatagttt acaaattgga attttgtgtt
61 gcttggcgcc tgaaaagaat ttgctcaggc aaaatgtccg aggaaacagc agcagcagca
121 gtagtggtag ccccctccac tctcaccacg gcccagaagt cgcgcattga gcgcaacctg
181 gccaaggccc agagactgcg agaggccaaa cttgtctcgc atccttacaa ggaactcggc
241 aaccaccttg gggatactca gccagagggt gggccgagtc agggcagctc ggttatcaag
301 gtgcagggca ccaaatacat tgacagtggc ggtggcttcc tgctggaaca gcctgtgctg
361 ccggcggctg gagcaggagc tgccgacaag ccagaggatg gggcagtggc caatttcgtg
421 gacgatgcca ttgccatacc ggtggtgttc gaggagtgtc tggagtgcgg cgaacccttt
481 gccgactcgt atctgtttac caattttggg cactcggtgt gcgacaagtg ccgggacaac
541 gaggagcgcc actcgctcat cacccgcact gaggccaagg ccgagtatct tctgaaggac
601 tgcgactttg acaagcgcga gccaaagttg cgctacatca gccgcaagaa tccccataat
661 gtgcgctggg gcgaaatgaa gctctacctg cactcgcagg tccaaaaacg ggccatggag
721 gtgtggggca gcgaggagga gcttgtccgc cagcacgagg gtcgggaaga gaagcgcgag
781 gtgggcaagg cccgcaagta caacaaacag atgaagcagc tccgcatgga ggtccgcagc
841 agtatttata ccaagaaaac gcatgctata cacgagcacg aattcggccc cgacacctac
901 aacgaggagg aggacgagta cacgcacacc tgcctcacct gtccctacac cgaaacctac
961 gaaaagatgt agtgagagaa accgatagac attcttcatt aaaaaaccta tttcgccata
1021 ttttgtaaga cccttgaagg aaaacctttt gattttgatt taaaattgta tttgaatgct
1081 gagtttttgc cgccacatga atgaaatata ttggatattg ctaatggaat attaaatggt
1141 ccatattgcc agatgatatg a