PREDICTED: Drosophila obscura DNA repair protein complementing XP-A


LOCUS       XM_022354927            1161 bp    mRNA    linear   INV 14-MAY-2021
            cells homolog (LOC111066372), mRNA.
ACCESSION   XM_022354927
VERSION     XM_022354927.2
DBLINK      BioProject: PRJNA728747
KEYWORDS    RefSeq.
SOURCE      Drosophila obscura
  ORGANISM  Drosophila obscura
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024542752.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On May 14, 2021 this sequence version replaced XM_022354927.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Drosophila obscura Annotation
                                           Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Drosophila obscura"
                     /mol_type="mRNA"
                     /isolate="BZ-5 IFL"
                     /db_xref="taxon:7282"
                     /chromosome="Unknown"
                     /sex="male"
                     /tissue_type="whole fly"
                     /dev_stage="Adult fly"
                     /geo_loc_name="Serbia: Babin Zub"
                     /collection_date="2017"
     gene            1..1161
                     /gene="LOC111066372"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 6 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 17 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:111066372"
     CDS             94..972
                     /gene="LOC111066372"
                     /codon_start=1
                     /product="DNA repair protein complementing XP-A cells
                     homolog"
                     /protein_id="XP_022210619.2"
                     /db_xref="GeneID:111066372"
                     /translation="MSEETAAAAVVVAPSTLTTAQKSRIERNLAKAQRLREAKLVSHP
                     YKELGNHLGDTQPEGGPSQGSSVIKVQGTKYIDSGGGFLLEQPVLPAAGAGAADKPED
                     GAVANFVDDAIAIPVVFEECLECGEPFADSYLFTNFGHSVCDKCRDNEERHSLITRTE
                     AKAEYLLKDCDFDKREPKLRYISRKNPHNVRWGEMKLYLHSQVQKRAMEVWGSEEELV
                     RQHEGREEKREVGKARKYNKQMKQLRMEVRSSIYTKKTHAIHEHEFGPDTYNEEEDEY
                     THTCLTCPYTETYEKM"
     misc_feature    457..969
                     /gene="LOC111066372"
                     /note="DNA repair protein; Region: rad14; TIGR00598"
                     /db_xref="CDD:273164"
ORIGIN      
        1 tatgtgaatg ccaattgtgg aggaagcaga gaaatagttt acaaattgga attttgtgtt
       61 gcttggcgcc tgaaaagaat ttgctcaggc aaaatgtccg aggaaacagc agcagcagca
      121 gtagtggtag ccccctccac tctcaccacg gcccagaagt cgcgcattga gcgcaacctg
      181 gccaaggccc agagactgcg agaggccaaa cttgtctcgc atccttacaa ggaactcggc
      241 aaccaccttg gggatactca gccagagggt gggccgagtc agggcagctc ggttatcaag
      301 gtgcagggca ccaaatacat tgacagtggc ggtggcttcc tgctggaaca gcctgtgctg
      361 ccggcggctg gagcaggagc tgccgacaag ccagaggatg gggcagtggc caatttcgtg
      421 gacgatgcca ttgccatacc ggtggtgttc gaggagtgtc tggagtgcgg cgaacccttt
      481 gccgactcgt atctgtttac caattttggg cactcggtgt gcgacaagtg ccgggacaac
      541 gaggagcgcc actcgctcat cacccgcact gaggccaagg ccgagtatct tctgaaggac
      601 tgcgactttg acaagcgcga gccaaagttg cgctacatca gccgcaagaa tccccataat
      661 gtgcgctggg gcgaaatgaa gctctacctg cactcgcagg tccaaaaacg ggccatggag
      721 gtgtggggca gcgaggagga gcttgtccgc cagcacgagg gtcgggaaga gaagcgcgag
      781 gtgggcaagg cccgcaagta caacaaacag atgaagcagc tccgcatgga ggtccgcagc
      841 agtatttata ccaagaaaac gcatgctata cacgagcacg aattcggccc cgacacctac
      901 aacgaggagg aggacgagta cacgcacacc tgcctcacct gtccctacac cgaaacctac
      961 gaaaagatgt agtgagagaa accgatagac attcttcatt aaaaaaccta tttcgccata
     1021 ttttgtaaga cccttgaagg aaaacctttt gattttgatt taaaattgta tttgaatgct
     1081 gagtttttgc cgccacatga atgaaatata ttggatattg ctaatggaat attaaatggt
     1141 ccatattgcc agatgatatg a