PREDICTED: Drosophila obscura tRNA
LOCUS XM_022354925 2371 bp mRNA linear INV 14-MAY-2021
(cytosine(34)-C(5))-methyltransferase (LOC111066370), mRNA.
ACCESSION XM_022354925
VERSION XM_022354925.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022354925.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2371
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2371
/gene="LOC111066370"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 2 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111066370"
CDS 113..2320
/gene="LOC111066370"
/codon_start=1
/product="tRNA (cytosine(34)-C(5))-methyltransferase"
/protein_id="XP_022210617.2"
/db_xref="GeneID:111066370"
/translation="MARGKKQNPFAARKRQKRENGPQRPDRRSEPYEETKRDNVSFIK
YYHLQKICHTEEEWTQFLESIRDNLPTTFRVTGFKGEAKALLNIIETQLFTEYVRAVA
ELHQKPPEQVERPLCLPWYPNGLAYQLHLTRKDIRRSEPLCRLHNFLIVETTAGSISR
QEAVSMIPPIVLDVKPTDKVLDMCAAPGSKTAQLIEALHASPEEHKIPPGFVLANDVD
NNRCYMLVHQAKRLNSPCLLVTNHDSSIFPNLLQSSEDGAKAVLKFDKILCDVPCSGD
GTLRKNPDIWTKWNLAQAYNLHGIQYRIVRRGAEMLEVGGRLVYSTCSLNPIENEAVL
QRILKDADGALELVDAGHLVPGLKYNPGMTDWKLATKEVDAVYTSFDEVPESLHTIIR
PAMFPLPAEDMAKINLNKCMRILPHLQDTGGFFVAVIVKRRQLSFEKNDVQDLLEKPA
KAADEEPQLDESGKPIEAKNVPWGPQRKRRRLHGYKEDPYVFFGDEDADYNAIKEFYQ
LDESLSKRCLLTRCVTAKKKNIYYCSEPIRKLVVGNEHNIKIINTGVKTFVRCENRHT
VHPYRLAQEGLQTSNAFMGSSRRIEVHRDDLVLLLNCTDPTKPPSTHELKQATQDRCS
ELGVGSCILKYVDEQFTLFVVGWRGTSSLRAYVDRDETIHILRLLGADLSKFEVNKYE
EAKKAAAAAAAAAAEATETNSGAENGANGAVVGEAAPVAAPTPMEADEPATES"
misc_feature <275..1411
/gene="LOC111066370"
/note="16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF
family [Translation, ribosomal structure and biogenesis];
Region: RsmB; COG0144"
/db_xref="CDD:439914"
ORIGIN
1 atccaacacg tgctgccggc tgtttggtac ggtactgtgg gcgcctgaaa aataaatatt
61 ttcgttcatt attttgcatt tacttggacc agcacgaaga caatttttga taatggcgcg
121 tggaaagaaa cagaatccct ttgcggcccg aaaacgtcaa aagcgcgaaa acggtccaca
181 acgccccgat cggcgttccg agccctacga ggagaccaaa cgcgacaatg tctcattcat
241 caagtactat cacctgcaga agatttgcca caccgaggag gaatggacgc agttcctcga
301 atccattcgc gacaatctgc caaccacgtt tcgtgtgacg ggctttaagg gcgaggcgaa
361 ggccctgctg aacatcattg agacgcagct cttcaccgag tatgtgcgcg cggttgcgga
421 actgcatcaa aagccgccag agcaagtgga gcgacccctg tgcctgccct ggtatcccaa
481 cggcttggcc tatcagctgc acctcacgcg caaggatata cgacgctcgg agccgctttg
541 ccgactgcac aactttctca ttgtggagac aacggccggt agtataagtc gtcaggaggc
601 cgtctctatg atcccgccca ttgtgctgga cgtgaagccc acggacaagg tcctggacat
661 gtgtgccgcg cccggctcca agacggccca gctcatcgaa gcactgcacg cctcgcccga
721 ggagcacaag atcccgcccg gctttgtcct ggccaacgat gtcgacaata atcgctgcta
781 catgctggtt caccaggcca agcgtctgaa ctcgccctgc ctgctggtga ccaaccacga
841 cagcagcatc ttcccgaacc tgctgcagag cagcgaggac ggtgccaagg ccgttctcaa
901 gttcgacaag atcctctgtg atgtgccctg ctccggggac ggtacgctgc gcaagaatcc
961 cgacatctgg accaagtgga acctggccca ggcgtacaac ctgcatggga tacagtaccg
1021 cattgtgcgt cgcggtgccg agatgctcga ggtgggtggc cgcctggtct actccacctg
1081 ctccctcaac ccaattgaga acgaggccgt gctgcagcgc attctcaagg atgccgatgg
1141 ggcgctcgag ctggtggatg ccggccacct ggtgcccggt ctgaagtaca atcctggcat
1201 gacagactgg aaactggcca ccaaagaggt ggacgctgtg tacacaagct tcgacgaggt
1261 accggagagc ctgcacacca tcatccgtcc agccatgttc ccgctgcccg ccgaggacat
1321 ggccaagatt aacctgaaca agtgcatgcg gatactgccg catctgcagg acaccggcgg
1381 cttctttgtg gccgtcatcg tgaagcggcg ccagctcagc ttcgagaaga acgatgtgca
1441 ggacttgctg gaaaagccag caaaagccgc cgacgaagag ccccaactcg acgagtccgg
1501 caagcccatc gaggcgaaga acgtgccgtg gggaccacag cggaagcgac gacgactcca
1561 tggctacaag gaggatccgt atgtgttctt tggcgacgaa gatgccgact acaatgccat
1621 caaggagttc taccagctgg acgagtcgct cagcaagcgc tgtctcctca cccgttgcgt
1681 caccgcgaag aaaaagaaca tctattactg ctcggagccc atccggaagc tggtggtggg
1741 caacgagcac aacatcaaga taatcaacac cggtgtaaag acctttgtcc gctgcgagaa
1801 ccgccacacg gtccatccat atcggctggc ccaggagggc ctgcagacct cgaacgcttt
1861 catgggcagc agtcgtcgca ttgaggtgca tcgcgacgat ctggtcctgc tgctcaactg
1921 caccgatccc acgaaaccgc cctcgaccca cgaactgaag caggctaccc aggaccgatg
1981 cagcgagctt ggcgtgggca gctgcatcct gaagtacgtg gacgaacagt tcaccctgtt
2041 cgtggttgga tggcgcggca cctctagcct gcgggcctat gtcgatcgcg acgagaccat
2101 tcacatcctc cgtctgctcg gcgccgatct cagcaagttt gaggtcaaca aatacgagga
2161 ggccaagaag gcggccgcag cagcagcagc cgctgccgct gaagccacag aaaccaattc
2221 tggtgcagag aatggggcta atggggcagt ggtaggtgag gcggccccag ttgcagcacc
2281 cacacctatg gaagctgacg aaccggcaac ggagagttaa tgaaagttat aatctctttg
2341 aaaattcatt aaatttgact ctccacgcct c