PREDICTED: Drosophila obscura cap-specific mRNA
LOCUS XM_022354924 3335 bp mRNA linear INV 14-MAY-2021
(nucleoside-2'-O-)-methyltransferase 1 (LOC111066369), mRNA.
ACCESSION XM_022354924
VERSION XM_022354924.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022354924.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..3335
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..3335
/gene="LOC111066369"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 3 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111066369"
CDS 82..2445
/gene="LOC111066369"
/codon_start=1
/product="cap-specific mRNA
(nucleoside-2'-O-)-methyltransferase 1"
/protein_id="XP_022210616.2"
/db_xref="GeneID:111066369"
/translation="MMEEQSDDENSEPTPKKIKREWVKSYSNKAMEMMKKMGYENDKG
LGKSNQGRLEPIIAVQQDGRRGFGLKLDAAHLAAGQWDPNCEELEMPETFEWLTNMGY
NASHYTIDQLMGYLVFGERKRSLDDENRYCDPEILQHILNSKSAFDDLNDNEKRRARS
RCNPFETIRSSIFLNRAAVKMANIDSMCDYMFTNPKDLEGRDLVDPKELLYFTDMCAG
PGGFSEYVLFRKSWEAKGFGFTLRGANDFKLEKFFAASPESFDTYYGIKDDGNIFDDQ
NQDSLNEYIRRHTPSGVHFAMADGGFSVEGEENIQEILSKQLYLCQCLTALKILRKNG
NFVCKVFDLFTPFSVGLIYLMYKCFHQIAIIKPNSSRPANSERYLICKYKQEDTIAII
NFMNTINIMLNEDRDSGDDILEIFDANEIAADGDFMRYIIDSNNAIGKKQVVGLHKIA
AFAKNAELKETRQSEVRQECLKRWGLPDKLRQAPENKTTDRMLEELLLDWSQDRNWLN
FSPAEMNNVTALSNTVQNVRDWIFMPIGREETNINSCSLFMCRSRGNLLRYTEHKKWE
LVEASFEVQARSIFFGQIVFEFYGEGRTIQRVPALHIIDGICLGGIDIRRRPLCDRIS
MCDKYARSLNKPYKKERAHGPLRSKPFFRLQDMNQFFGDMRHYVLKDNSQRFGFSLDD
NKFFVPGSILMLCELDQNYVSAKSRSRNQVYYFNIKNKESYYKDSIPNNKKASEIFAS
FRQSYARRLLWKWTDLRQVEEHANEDNPSILFRSHFVKFIAEKLTHA"
misc_feature 157..291
/gene="LOC111066369"
/note="G-patch domain; Region: G-patch; pfam01585"
/db_xref="CDD:396249"
misc_feature 598..1233
/gene="LOC111066369"
/note="FtsJ-like methyltransferase; Region: FtsJ;
pfam01728"
/db_xref="CDD:426399"
misc_feature <1825..>2052
/gene="LOC111066369"
/note="Adenylation domain of proteins similar to
ATP-dependent polynucleotide ligases; Region:
Adenylation_DNA_ligase_like; cl12015"
/db_xref="CDD:448381"
ORIGIN
1 tgccctcttt ggtttgatac cagtaaacaa attttctggc cgtacttttt aaggaaactt
61 agttttattc agtgcatagc aatgatggag gaacagtccg acgatgagaa ctcggagccc
121 actccaaaga agataaagcg ggagtgggtg aagagctact ccaacaaggc catggagatg
181 atgaagaaaa tgggctacga gaacgacaag ggtttgggta agagcaatca aggtcgcttg
241 gagcccatta tagctgtcca gcaggatggt cgtcgtggtt ttggcctcaa gctggacgca
301 gcccatttgg ccgctggcca atgggacccc aactgcgagg agctggagat gccggagaca
361 ttcgagtggc taacaaatat gggctacaat gccagtcact acacgatcga tcaactgatg
421 ggctacctcg tctttggtga acgcaaacgc agtctggacg atgagaatcg ctactgtgat
481 ccagaaatcc tccaacacat ccttaactcg aagtcggcct ttgacgatct taacgacaac
541 gagaaacgtc gggcccggtc tcgctgcaat ccatttgaga cgatacgcag ctccattttc
601 ctcaatcggg ccgccgttaa aatggccaac attgactcca tgtgcgacta catgttcacc
661 aatcccaaag atctggaggg acgtgatctg gtggatccca aggagctgct ctactttacg
721 gacatgtgtg cgggccctgg cggcttctct gaatatgtcc tgttccgcaa atcgtgggag
781 gcaaaaggat tcggcttcac gttgcgcggt gccaacgatt ttaagctgga gaagttcttt
841 gccgcctccc cggagtcctt cgatacgtac tatggcatca aggatgatgg caacatattc
901 gatgaccaaa atcaggattc attgaacgag tacatacgcc gtcacacacc cagtggggta
961 cactttgcca tggccgacgg cggattctcg gtggagggcg aggagaacat acaggagatt
1021 ctgtcgaagc agctgtatct gtgtcagtgc ctcaccgcac tcaaaatatt gcgcaagaac
1081 gggaactttg tgtgcaaggt gttcgatcta tttacaccgt tcagcgtggg tctgatctac
1141 ctgatgtaca aatgctttca tcaaattgcg atcatcaagc caaatagcag tcgcccggcc
1201 aattcggagc gctaccttat ctgcaaatac aagcaggagg ataccattgc cattatcaat
1261 ttcatgaata ccatcaacat aatgctcaac gaggaccgcg acagtggcga cgacattctc
1321 gagatctttg acgccaacga gatcgctgcg gatggcgatt tcatgcgcta catcatcgac
1381 tcgaacaatg ccattggcaa gaagcaggtt gtcggactgc acaagatcgc tgcctttgct
1441 aagaatgccg agctgaagga aacacgccag tcggaggtgc gtcaggagtg cctcaagcgt
1501 tggggcctgc ccgataagct gcgtcaggcg ccagaaaata aaacaaccga tcgtatgctt
1561 gaggagctgc tgctcgattg gtcgcaggat cgcaactggc tcaatttctc gccagctgag
1621 atgaacaatg tgacggcgct ctcgaatacc gtacagaatg tcagagactg gatattcatg
1681 cccatcggtc gcgaggagac aaacatcaat agctgcagcc tgttcatgtg cagatcgcgc
1741 ggaaatctcc tccgctacac ggagcacaaa aagtgggagc tggtcgaggc gtcctttgag
1801 gtgcaggcac gttccatatt tttcggtcag atcgtcttcg agttctacgg tgagggtcgc
1861 accattcagc gtgtgcccgc gctgcacatc attgacggga tctgcctggg cggcatcgac
1921 atccggcgtc gtccattatg cgatcgcatc agcatgtgcg ataagtatgc ccgcagcttg
1981 aacaaaccgt acaagaagga gcgcgcccac ggtccgttgc gcagcaagcc attctttcga
2041 ctgcaggaca tgaaccagtt ctttggcgac atgcgccact atgtgctgaa agataattca
2101 cagcgctttg gcttctcact ggacgacaac aagttctttg tgcccggcag cattctaatg
2161 ctctgcgaac tggatcagaa ctatgtttcg gccaagtcgc gttcgcgcaa ccaggtctac
2221 tacttcaaca tcaagaacaa ggagtcgtat tataaggata gtatacccaa taataaaaag
2281 gcctccgaaa tctttgcctc cttccgccaa agctatgcac gccgtctgct ctggaagtgg
2341 acggacttgc ggcaggttga ggagcatgca aacgaggaca atccatcgat attgttccgt
2401 agccatttcg ttaaatttat cgcggaaaag ttgacccacg cgtaggcgac atctgcaaaa
2461 tatctgcata tatatccata acaagatatt ggatattgct cccccccccc caccaccacc
2521 ctccccgtag cattagatct taagattatc tatatattta aaaacaaaca aaaagaggaa
2581 aatgtatgtt tatattattt tttttccgcc tgcataggat ttatctggag gttttacaac
2641 agatcctgta ttttacttat acgatttaag tatctgacga actattgtcc ccaggagctg
2701 ttcccaaaac aaaaacaaca acaaaacatt gtaactttct gtttctgacg ttcatttgta
2761 tgtaactatt atacataatt aattaattaa ttgtaaattt gtgtcggacc gaaatcatga
2821 ctggattgat tacccgaatg gcaatagatc ttaccaaaaa aaaaaaaata agaagcagac
2881 cgccaaggct ttggatatgc ccttgccaaa atttagctag ttttaattaa tgtttttttt
2941 tttttatatt ttaatttttc ttggaataca aaaaaccctg aaactgtgga tgagaatcac
3001 ataacaaata tatataaata tatgtatttt tttttgagtt tcgactctga taactgacaa
3061 aaattaaaaa atcatacttt ttatttgaac tatggatggc gcccagaatt ttctacgagt
3121 atacctatac cctggatgca agcgaatgca tggtacataa tgaatcaagc ttgcattaag
3181 acactgcaga actcctattg tgattatgat tctccgcaat caaaattcat gaataataaa
3241 caaatgttca gtgccgcatt ggagctatcc agtatccagt acgagaacga ggcaaattat
3301 gtatgaagat ttgctgattc tacaattcgt acgca