PREDICTED: Drosophila obscura serine/threonine-protein phosphatase
LOCUS XM_022354906 2201 bp mRNA linear INV 14-MAY-2021
beta isoform (LOC111066364), transcript variant X1, mRNA.
ACCESSION XM_022354906
VERSION XM_022354906.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022354906.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2201
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2201
/gene="LOC111066364"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 39 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 6 samples with support for all annotated
introns"
/db_xref="GeneID:111066364"
CDS 627..2021
/gene="LOC111066364"
/codon_start=1
/product="serine/threonine-protein phosphatase beta
isoform isoform X1"
/protein_id="XP_022210598.1"
/db_xref="GeneID:111066364"
/translation="MGDFDLNVDSLIQRLLENFKKQKEAEEHAQKLLIAQQLAAAGGA
AVAVATATATAAAAAAVTNAATSSSFTSTSAAAAAAASSSCLGSAANNHDPLEDLTEQ
QRRLLQQYSISPPSETMISADGDQITVHHPREEPKKSRLKLRDFFVAEFVRSCRTGKQ
VQMTEAEVRGLCLKSREIFLQQPILLELEAPLIICGDIHGQYTDLLRLFEYGGFPPAA
NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRR
YNVKLWKTFTDCFNCLPVAAIIDEKIFCCHGGLSPDLQGMEQIRRLMRPTDVPDTGLL
CDLLWSDPDKDVQGWGENDRGVSFTFGVDVVSKFLNRHELDLICRAHQVVEDGYEFFA
RRQLVTLFSAPNYCGEFDNAGGMMTVDDTLMCSFQILKPSEKKAKYLYSGMNSSRPTT
PQRSAPMLATNKKK"
misc_feature 1080..1919
/gene="LOC111066364"
/note="PP1, PPKL (PP1 and kelch-like) enzymes, and related
proteins, metallophosphatase domain; Region: MPP_PP1_PPKL;
cd07414"
/db_xref="CDD:277359"
misc_feature order(1215..1217,1221..1223,1299..1301,1311..1313,
1395..1400,1410..1415,1425..1427,1542..1544,1608..1616,
1641..1643,1683..1691,1767..1769,1839..1853)
/gene="LOC111066364"
/note="active site"
/db_xref="CDD:277359"
misc_feature order(1215..1217,1221..1223,1299..1301,1395..1397,
1542..1544,1767..1769)
/gene="LOC111066364"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:277359"
misc_feature order(1311..1313,1410..1415,1425..1427,1608..1616,
1641..1643,1683..1691,1839..1853)
/gene="LOC111066364"
/note="natural toxin binding site [chemical binding];
other site"
/db_xref="CDD:277359"
misc_feature order(1560..1562,1566..1568,1617..1619,1632..1634,
1671..1673,1698..1700,1722..1727,1731..1739,1743..1751,
1794..1796,1806..1808,1887..1892,1896..1898,1902..1904,
1908..1910)
/gene="LOC111066364"
/note="MYPT1 binding site [polypeptide binding]; other
site"
/db_xref="CDD:277359"
ORIGIN
1 ccctcgatgg tttgacacct ctacgggaga ccgtaacaaa aattaaattg aatcgtaatt
61 ttgtttggat cgtgccactc ttttaaagtg aatgtacctc gttcgcgtac gagtgtacaa
121 ttttttttct gtttgtctgt gaacatcagt gaaacaccgc gcgccccgca cacaactacc
181 gacgactccc cgcgcaacgc agcagcaaca gcgacggcaa gaagcggccg caacaacaaa
241 acaaaaagtg aaattgcctt ttgcggaaac caacaaaaaa aaaagagaag aattaagtac
301 aagctaacac acacaggcga agcaagtaaa gattgttgtt aacacagcac ctgtgcgtgt
361 gtgtgtgcgt gtgtaggtgc ggttgtgtgc gtatggtgtt gcgttccaac ccaaaaacca
421 acaaaaaaaa agaaacgttc caattggaat accgcctgct aagaagaaca gctggctcca
481 ccaacaaaca aaaaaaaaaa aacaggcggc caagaacatt ttagccgaaa agaccatctg
541 aacggggtct attgaacgtt tttagacgta aaggaaaaca tctgagcggc ggccaaagac
601 aaaacgaaaa tatagcggct attaaaatgg gcgacttcga tctgaatgtg gatagtctta
661 tccagaggct gctggaaaat ttcaaaaaac aaaaagaggc cgaagagcat gcccagaagc
721 tgctcatcgc tcaacaattg gcggctgctg gtggggcggc ggttgccgtt gctaccgcaa
781 cggctactgc tgccgctgcc gctgccgtca ccaacgctgc aacgtcatcg tcattcacca
841 gcacatccgc tgctgctgct gctgctgcca gcagcagttg tttgggttcg gccgccaaca
901 atcacgatcc gctggaggat ctgaccgaac agcagcgacg cctgctgcaa cagtattcga
961 tatcgccgcc cagcgaaacg atgatatcgg ccgatggcga tcaaataacg gtgcatcatc
1021 cgcgcgagga gcccaagaaa tctcgattga aattgcgcga ctttttcgtc gccgaatttg
1081 tgcgcagctg tcgtaccggc aaacaggtgc agatgaccga ggcagaggtg cgcggcttat
1141 gcctgaagtc gcgcgagata ttcttgcaac agccgatact gctggagttg gaggcgccgc
1201 tgatcatctg cggcgacatc catggccagt acacagacct gttgcggctg ttcgagtacg
1261 gtggcttccc gccggccgcc aattatctgt tcctcggcga ttatgttgat cggggcaagc
1321 agtcgctgga gaccatctgt ttgctgctgg cctacaagat caaatatccg gagaatttct
1381 tcttgttgcg cggcaatcat gagtgcgcca gtattaacag aatttatggc ttctacgacg
1441 agtgcaagcg ccggtacaat gttaaacttt ggaagacctt cacagactgc ttcaactgtc
1501 tgccggtggc cgccatcatc gacgagaaga tattctgctg ccacggcggc ctcagtcccg
1561 atctgcaggg catggagcag atccgccgcc tcatgcggcc cacagatgta cccgacactg
1621 ggctgctgtg cgatctgctg tggagtgatc ccgacaagga tgtgcagggc tggggcgaga
1681 acgatcgtgg cgtgagcttt acattcggcg tggatgtggt ttccaagttc ttgaatcgtc
1741 acgagcttga cttgatttgt cgtgcgcatc aggtggtgga ggatggctac gagttctttg
1801 cacgtcgcca gctggtcaca ctattctcgg cgcccaacta ttgcggcgaa ttcgataatg
1861 ctggcggcat gatgaccgtg gacgatacgc tcatgtgctc atttcagata ttgaaaccat
1921 ccgagaagaa ggcaaagtat ttgtacagtg gaatgaactc gtcgcgaccc actacaccgc
1981 agcgaagcgc cccaatgctg gcgaccaata agaagaaata atatatccat ccgcttccat
2041 ttccttaaag gttcaacaac aaaacaaata gaaagaaaac actagtatac atacatacat
2101 acatacatac atacatacat acatacaaac atacatagat atatagatat atattgaaga
2161 tcgaaaatgg caaaatctac agtgagtgtg agagacagag a