PREDICTED: Drosophila obscura ras-related protein ORAB-1
LOCUS XM_022354900 642 bp mRNA linear INV 14-MAY-2021
(LOC111066360), mRNA.
ACCESSION XM_022354900
VERSION XM_022354900.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq; includes ab initio.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022354900.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 100% of CDS bases
##RefSeq-Attributes-END##
FEATURES Location/Qualifiers
source 1..642
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..642
/gene="LOC111066360"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 103 Proteins"
/db_xref="GeneID:111066360"
CDS 1..642
/gene="LOC111066360"
/codon_start=1
/product="ras-related protein ORAB-1"
/protein_id="XP_022210592.2"
/db_xref="GeneID:111066360"
/translation="MHFKILLLGDSGVGKTSLLQRFMGGRFTARYHSSVGVELGIHYI
EVAGQVVQLLIWDAAGEKRFRPLFPSYYREVHGIMLVYDTTKPSSFRSLPCWLDEIKM
FSQRDVCIVLVGNKCENLKCRKISQLQGLTFADGKGLAFCEASARSGVNVDQIFATLS
LKIHETYQAQYSDIYTVRLKSPKPKLESPLKDTGSFRLVASPGPKNSKKFCCW"
misc_feature 7..498
/gene="LOC111066360"
/note="Members of the P-loop NTPase domain superfamily are
characterized by a conserved nucleotide phosphate-binding
motif, also referred to as the Walker A motif
(GxxxxGK[S/T], where x is any residue), and the Walker B
motif (hhhh[D/E], where h is a...; Region: P-loop
containing Nucleoside Triphosphate Hydrolases; cl38936"
/db_xref="CDD:476819"
misc_feature 7..12
/gene="LOC111066360"
/note="Rab subfamily motif 1 (RabSF1); other site"
/db_xref="CDD:206640"
misc_feature 25..48
/gene="LOC111066360"
/note="G1 box; other site"
/db_xref="CDD:206640"
misc_feature order(31..51,79..81,100..102,178..180,343..348,352..354,
433..441)
/gene="LOC111066360"
/note="GTP/Mg2+ binding site [chemical binding]; other
site"
/db_xref="CDD:206640"
misc_feature 49..81
/gene="LOC111066360"
/note="Rab subfamily motif 2 (RabSF2); other site"
/db_xref="CDD:206640"
misc_feature order(79..81,100..120)
/gene="LOC111066360"
/note="Switch I region; other site"
/db_xref="CDD:206640"
misc_feature 100..102
/gene="LOC111066360"
/note="G2 box; other site"
/db_xref="CDD:206640"
misc_feature order(103..105,109..117,160..162,166..168,187..192,
199..201,211..213,226..228)
/gene="LOC111066360"
/note="effector interaction site [active]"
/db_xref="CDD:206640"
misc_feature order(103..108,112..114,166..171,190..192,202..210)
/gene="LOC111066360"
/note="GDI interaction site [active]"
/db_xref="CDD:206640"
misc_feature 103..117
/gene="LOC111066360"
/note="Rab family motif 1 (RabF1); other site"
/db_xref="CDD:206640"
misc_feature order(106..129,148..150,154..156)
/gene="LOC111066360"
/note="GEF interaction site [polypeptide binding]; other
site"
/db_xref="CDD:206640"
misc_feature 154..168
/gene="LOC111066360"
/note="Rab family motif 2 (RabF2); other site"
/db_xref="CDD:206640"
misc_feature 169..180
/gene="LOC111066360"
/note="G3 box; other site"
/db_xref="CDD:206640"
misc_feature order(178..180,184..195,199..216)
/gene="LOC111066360"
/note="Switch II region; other site"
/db_xref="CDD:206640"
misc_feature order(187..195,199..204)
/gene="LOC111066360"
/note="Rab family motif 3 (RabF3); other site"
/db_xref="CDD:206640"
misc_feature 211..216
/gene="LOC111066360"
/note="Rab family motif 4 (RabF4); other site"
/db_xref="CDD:206640"
misc_feature 238..255
/gene="LOC111066360"
/note="Rab family motif 5 (RabF5); other site"
/db_xref="CDD:206640"
misc_feature 322..336
/gene="LOC111066360"
/note="Rab subfamily motif 3 (RabSF3); other site"
/db_xref="CDD:206640"
misc_feature 343..354
/gene="LOC111066360"
/note="G4 box; other site"
/db_xref="CDD:206640"
misc_feature 433..441
/gene="LOC111066360"
/note="G5 box; other site"
/db_xref="CDD:206640"
ORIGIN
1 atgcacttca agatactgtt gttgggcgat tctggcgtgg gcaaaaccag tctgctgcag
61 cgcttcatgg gcggacgttt cacggcccgg taccacagct ccgtgggtgt ggagctgggt
121 atacactaca ttgaggtggc cggacaggtg gtgcagctac tcatctggga tgcggccggc
181 gagaagcgtt ttcgtcccct gtttcccagc tactatcgtg aagtgcacgg cattatgctg
241 gtctacgaca ccacaaaacc atccagtttc aggagcttgc cgtgctggct ggatgagatc
301 aaaatgttca gccagcggga cgtgtgcatt gtcctggtgg gcaacaagtg cgaaaatctg
361 aaatgccgca agatcagcca actgcaggga ctcacctttg ccgacggcaa gggactcgcc
421 ttctgtgagg catccgccag gagcggggtc aatgttgacc aaatctttgc cactctctcg
481 ctcaagatac acgaaaccta tcaggcgcaa tactctgaca tctacactgt tcgcctgaag
541 tcgcccaagc ctaagctgga atccccactg aaggacactg gcagtttccg cttggttgct
601 tcgccgggcc caaagaatag caaaaaattt tgttgttggt ga