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LOCUS XM_022354877 3014 bp mRNA linear INV 14-MAY-2021 mRNA. ACCESSION XM_022354877 VERSION XM_022354877.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022354877.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3014 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..3014 /gene="LOC111066351" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns" /db_xref="GeneID:111066351" CDS 897..2696 /gene="LOC111066351" /codon_start=1 /product="homeobox protein vnd" /protein_id="XP_022210569.2" /db_xref="GeneID:111066351" /translation="MSNYNPNCGYFEDCSYYTNNVYQQDYCMQPDYEYNKHVYDLFDA KVPSSQRSGFHISDILNLDGSDLKNAAAAAAAAAAAQHSSELSHAAEASNGHGPATLS PTPTSAAALEEHGAGSGHGEHHTTEHHPQQPHHPPQHPHHHQPHPQHHQQQHPHPHPN PHPQHHQQTIAPPLPLSHHQSSAAAAAAAAASAGVASDHHVGAHAHAAAHLLASHNAA AAAAVAAGQYLPKNFAGTFGDEMSSYHHMAQTMLQHSGRSAWIKENELYGTQQPASPD STSPVTSEVSYTYIGSNCQTSPALSGDYKNYSRSADSDALSVGDAMHSIHGGANSGGP SAAHALHNNNNNNNNNSTSNNNNNNHSLKHDHPINGAGGGGGGASSGHDDSLNEDGIE EDIDDVDDADGSGGGGSGGLNSDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPE REHLASLIRLTPTQVKIWFQNHRYKTKRAQNEKGYEHPGLLHGHATHPHHPSALPSPR RVAVPVLVRNGKPCLGDGSKLAPDCVSVSSATATAMQNAAAAHHLVALNGAAYQHAAA AAAAGLHAHAHAHAQAHAHVHPHAHAQRAAWWP" misc_feature 2160..2330 /gene="LOC111066351" /note="Region: Homeodomain; pfam00046" /db_xref="CDD:459649" ORIGIN 1 agctgtccca gtcccagtcc cacttcccag ttcttcgtcc gtgtgtgtgt atgtggatca 61 tcgtgcagca agagcttctg gcctcagggg tcccttcatt ggcagtacga cattgtcagt 121 gggtaccatt cgacgtggaa cgcatcgaat gccgatcgcc agcttcgtgt cgcgtcgcgt 181 ttgccagagc gagagctttc acagccatcg agtgagtgcc agagcgggaa agcgagagcg 241 catgcgcatc tgcatctgca ttggtcatag taacggacag gcgaacaggc ggacactcag 301 acagcggaca gcagacagcg gaaagcggac agattgtttt agctgattgc gagtggcagc 361 gtttttatgg cttattgaaa tcggcaaacg gcagtcaaaa agcgcgcgct ccgcagccca 421 caactcggag agaccacctc ccactcgaga ccgtaaactg ttaaccgtaa accatcgacc 481 gtaaatccag actctttcgg caccgataga gttggcaaaa atgtagctct cgatcgaagt 541 gcaattgaat aataaatcaa agttcgcgcc acagcttaat ggttgtacga gtacacacaa 601 attataaagt gatcgtgcat taaaaaccga tcgacaacca catacaatac gtgcatatgt 661 ataggccact ccaggcacat cagcatttac ccccaagccc ccacatcggc tgtcatcgcg 721 aagtgcaaat aattaaccgt cgcgagctta caaaattaat tcattaaatg tgccactgac 781 tacacaattt ttttgcaatt attttatcgt ttctgtttcc tttcggctga gttttggttt 841 tgttccgatt atcctcctgg cggcaggcag cacgcgagag ccccctaaca ataattatga 901 gcaattataa tccgaattgc ggttacttcg aggattgcag ctactacacg aacaatgtgt 961 accaacagga ttattgcatg cagccggatt acgagtacaa caagcatgta tacgatttgt 1021 ttgatgccaa agtgccgtcg tcgcagcgct ccggcttcca tatatcggac atcctcaacc 1081 tggatggctc cgatctgaag aatgccgccg ccgctgctgc tgccgctgct gctgcccagc 1141 acagcagcga gctgagccac gcggcggaag ccagcaatgg ccatggccca gcaacgctct 1201 cgccgacgcc caccagtgcg gcggcgctgg aggagcatgg cgctgggtcc ggacacggcg 1261 agcaccacac cacagagcac catccccagc agccgcacca cccgccgcag catccgcatc 1321 accatcagcc gcatccccag caccaccagc aacagcatcc gcatccgcat ccgaatccgc 1381 atccgcagca ccaccagcaa acgatagccc cacccttgcc actgtcgcac caccagagca 1441 gtgcggctgc tgctgctgct gccgccgcca gtgcgggagt tgcatccgat caccacgtgg 1501 gcgcccacgc ccatgccgcc gcccacctgc tggccagtca caatgcggcg gccgccgctg 1561 ccgttgccgc cgggcagtat ctgcccaaga atttcgcagg caccttcggg gacgagatgt 1621 cctcctacca ccacatggcc cagacaatgc tccaacactc gggacgtagc gcgtggatca 1681 aagaaaacga attatacggc acacagcagc cggccagtcc tgatagcacc tcgccggtca 1741 catcggaggt ctcctacacg tacatcggct ccaattgcca aacctcgccc gccctctccg 1801 gcgactacaa gaactacagt cggtcggcgg acagtgatgc cctctcggtg ggcgatgcca 1861 tgcacagcat ccatggcggt gccaattctg gtggaccctc ggcggcacat gccctacaca 1921 acaacaataa caacaacaac aacaatagca ccagcaacaa caacaacaac aatcacagcc 1981 tgaaacacga tcaccccatc aatggagctg gtggcggagg cggaggagca agcagcgggc 2041 acgatgacag cctcaacgag gatggcatcg aggaggacat cgacgatgtg gacgatgcgg 2101 atggcagcgg tggcggcggc agtggcggcc tcaatagcga cggactgccc aacaagaagc 2161 gcaagcgccg cgtgctcttc accaaggcgc agacctacga gctggagcga cgattccgac 2221 agcagcgata cctgagcgca ccggagcgcg agcatctggc cagcctcatt cgtctgacgc 2281 cgacgcaggt gaagatctgg ttccagaatc accgctacaa gacgaagcgg gcacagaacg 2341 aaaagggata cgagcatccg gggctgctgc atggccacgc cacccacccg caccatccgt 2401 cggccctgcc atcgccaagg cgcgtcgccg tgcccgtgct ggtgcgcaac ggcaagccgt 2461 gcctcggcga cggctccaag ctggcgcccg actgtgtctc cgtgagctca gcgacggcca 2521 cggccatgca gaatgcggcc gccgcccacc acctggtggc gctgaatggg gccgcctatc 2581 agcatgcggc tgctgcggcc gccgctggac tccatgcaca tgcccatgcc catgcgcagg 2641 cccatgccca cgttcatcca catgcgcatg cgcagcgtgc cgcctggtgg ccctaatact 2701 gctagatacg gagaggctga gcgagagtca gtggcagtgg cagtggcaga gggtgtggta 2761 tggaggtatg gaggacactc gaatagtcga cactggagct gggaattcga acaaaacttt 2821 ggtgcaataa tggaacataa tggaaccttg tcacagccgg ctcgccaggc caacccgccc 2881 caccccccag aaaaaagaga accgaatcga agagaagcga aggagaagca gccaaaaact 2941 aaatatgtgg aaaaagaaga gcatagtcaa agtagaagcc tctgtcaatc ctgtacataa 3001 gtcagacaaa ggta