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LOCUS XM_022354818 5140 bp mRNA linear INV 14-MAY-2021 (LOC111066312), mRNA. ACCESSION XM_022354818 VERSION XM_022354818.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022354818.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5140 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..5140 /gene="LOC111066312" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns" /db_xref="GeneID:111066312" CDS 500..4795 /gene="LOC111066312" /codon_start=1 /product="transcriptional regulator ovo" /protein_id="XP_022210510.2" /db_xref="GeneID:111066312" /translation="MPKIFLIKNRLHQQQQRLLESQNLLQHKSQDDDRCLVPPLSPHG SGTPHSPSPSPSPAHPHPEPQGQCQTSSPFQQQDDQLPLSLTRKRFHHRRHYFGQSRH SLLIDHGLNLNPNLNQNQNQNQNSTELDVDHNAAAASEVQNEKLGCLRPAELLQRLSC TTTNQTTTSSSIATTTPTPTPTPTPTPPALATKDCDENSPIKTATTTTKTTASSSSIP KQPTPQSTAAERSSSSSSSEVDVDVEEEPDRKAHKEDEQLKCPSVVLAEEEEEEEEED GDVDVGIEAPRPRFYNTGIVLTQAQRKEYPKEHQQQEQPQPILVRARKEKEHDSDVDS DTDSDDGCKLIVDEKPLLPVDKPLSLRMRSTPPPAEERPSPPPPREPTPAVRCSVIQR APQTTAAAVATAGHAASPHHHYQNQHQHPEHQTPQRSVLLPLSAHDLDQLGPEQQEPI DYHVPKRQSPSYDSDEELNARRLERARQVREARRRNTILAARVLLAQSQRLNPRLVRS LPGILAAAAGHGRSSSSSGAAGQGFQSSGFGSGSSSSGSGSGQNASGGAGSPGGGFGG ALGGSGAGGGGMGGGRDGRGNYGPNSPPTGALPPFYESLKSGQQSTASNNTGGSQTSA GHGAGSHAAFNGNPNFLSIQNAAAAAYIMSAGAGVGGGGGGVGGGGGYINCGSNGAGG GGGNGNANGNSNGGGGGGTVGGGGAASSAGIDGNNLLNFASGLASNPNYNESNSKFHN PNSTMGHPFYGGNPSAYGIILKDEPDIEYDEAKIDIGTFAQNIIQATMGSSGQFNASA YEDAIMSDLASSQCPNGTVDPLQFTATLMLSSQTDHLLEQLSDAVDLSSFLQRSCVDD EGSTSPRQDFELGSTPSLTPDSVSVTPVEHHHHHHHSNHQSASTASQLDALHENLLTQ LTHNMTRNGVNSQQQQQQQQQQHVQQQQQHLQQQQQHVQQQHVQQHVQHVQQPPPSYQ HATRGLQMMQQQQQSQHSSYQQQSALMSQQQQQQLLSQQQQQSHHSHHQQQQQHHAAA YQQHNLYAAQQQQPHHQQQQQHHSHHQFQQQQQQSHHSHHLHHHDNSNMSLPSPTAAA AAAAAAAAAAVHLARPMSSSSSSGTNSSSSNSSMDANAAAAAAAALLDTKPLIQSLGL PPDLQLEFVNGGHGIKNPLAVENAHGGHHRIRNIDCIDDLSKHGHHSQQQQQQQSSPQ QQQQQTLQQQQQQQQQHQQQQSLQQQHQQQQQHQHHSSASSNASSHGSADALCMGGSG SASQAGDDSGVNGKFVCRVCMKTFSLQRLLNRHMKCHSDIKRYLCTFCGKGFNDTFDL KRHTRTHTGVRPYKCNLCEKSFTQRCSLESHCQKVHSVQHQYAYKERRAKMYVCEECG HTTCEPEVHYLHLKDLHPFSPALLKFYDKRHFKFTNSQFANNLLGQLPMPVHN" misc_feature 4334..4396 /gene="LOC111066312" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(4349..4351,4355..4357,4361..4363,4367..4372, 4379..4384,4391..4393,4433..4435,4439..4441,4451..4456, 4463..4468,4475..4477,4517..4519,4523..4525,4529..4531, 4535..4540,4547..4552,4562..4564) /gene="LOC111066312" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 4373..4444 /gene="LOC111066312" /note="Zinc-finger double domain; Region: zf-H2C2_2; pfam13465" /db_xref="CDD:463886" misc_feature 4418..4480 /gene="LOC111066312" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 4454..4531 /gene="LOC111066312" /note="Zinc-finger double domain; Region: zf-H2C2_2; pfam13465" /db_xref="CDD:463886" misc_feature 4502..4567 /gene="LOC111066312" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" ORIGIN 1 aaaactaaaa cttacgaaat ttttttcaag ttaatttttt gcaagtgctt ctgacgaaaa 61 aaacaagaaa aacaaacaaa caaaaacacc aaaaaaaaaa aaaaaacacc ttcaccagag 121 aagcagagaa caacatggat tatttataat gaagaagccc aagcaaaggt tgacttgagc 181 ttcagctcag gatacaaaca acaacaaaaa atacaaaaat atctcaaaaa ttgtatcaca 241 tttttttttt tcgtttgttt ttttgttgcg ctatttgtgc acaacacagt gggcggggca 301 aggatcaaac atacacacac aattggatta gtgttttgtt tattcgggaa ccctttgaag 361 accacctccc cactcgaccc cactggcgcg tttcgtcgcg tcacgcgttc cgttgcgtcg 421 ttcgtgttta atcgctcgtt tatcggtcgc cgatcgttaa tcgtgtatcc gttaatcgcc 481 aatcgccgcc accaccacca tgccgaagat cttcctgatt aagaaccgcc tgcatcagca 541 gcaacagcgt ctgctcgaat cacagaacct gctgcagcac aagagccagg acgatgaccg 601 atgcctggtg ccaccgctca gcccacatgg ctctggcaca ccgcactcgc cctcgccatc 661 gccatcgccc gcccatcccc atccagagcc gcagggtcag tgtcaaacgt catcgccatt 721 ccagcagcag gatgaccaac tgccgctgag tctgacgcgt aaacgcttcc accatcgccg 781 tcactacttc ggacagtcgc gtcacagtct cctcatagac catggactca atctcaatcc 841 caatctcaat caaaatcaaa atcaaaatca aaactctacg gaattggatg tcgatcacaa 901 tgcagcagca gcaagcgagg ttcaaaatga aaaattaggt tgcttgaggc cggcagaatt 961 gttgcagcgc ctaagctgca ccaccaccaa ccaaaccacc accagcagca gcatagccac 1021 aaccacaccc acacctacgc ccacaccaac acccacgccc cccgcattag ccacaaaaga 1081 ctgcgacgag aattctccaa taaaaacagc aacaacaaca actaaaacaa cagcaagcag 1141 cagcagcata ccaaagcagc cgacgccgca gtcgacagcg gcagagagga gcagcagcag 1201 tagcagcagc gaagtagatg tagatgtaga agaagagcca gataggaaag cgcacaaaga 1261 agatgagcaa ttaaagtgcc catcagtagt gttggccgaa gaagaagagg aggaggagga 1321 ggaagacggc gacgttgacg tcggaattga ggctccccgc ccgcgcttct acaacacggg 1381 catcgtcctc acccaggccc aacgaaagga gtaccccaag gaacaccagc agcaggagca 1441 accgcagccg atcctcgtca gagccagaaa agaaaaggaa cacgactcgg atgtggactc 1501 cgacacagac tccgatgacg gttgcaagtt gattgtggat gagaagcctc tgctgcccgt 1561 tgacaagccg ctgtcgctgc gtatgcgcag caccccgccc ccggcagagg agcgtcccag 1621 tccaccgccc ccaagggaac cgacgcccgc tgtccgctgc agcgtaatcc agcgcgcacc 1681 acagaccact gcagcagcag tagctacagc aggacacgct gcctccccgc atcaccatta 1741 tcagaatcag catcagcatc cggagcatca gacgccccaa aggagcgttc tattgcccct 1801 cagtgcccac gatctcgacc aactgggacc ggagcagcag gagcccattg attatcacgt 1861 gccgaagcgg caaagcccca gctacgacag cgacgaggag ctgaacgccc gccgcctaga 1921 gagagcgcga caggtgcgcg aggcccgcag gcgaaacacg atattggcag cccgcgtact 1981 gctggcccag tcgcagcgcc ttaatccgcg cctggtgcgt agcctgcccg gcattttggc 2041 tgcagccgcc ggtcacggcc gtagcagcag cagctctggt gcagccggac agggctttca 2101 gtcgtcgggc tttggcagcg gcagcagctc gtccggctcg ggcagcggac agaacgccag 2161 cggtggtgcc ggttcgccgg gaggtggctt tgggggtgcc ctaggcggca gcggagctgg 2221 aggcggtggc atgggcggtg gccgagacgg acgaggcaac tacggtccca actctccccc 2281 caccggggcc ctgccaccat tctacgagag cctgaagagt ggccaacaga gcacggccag 2341 caataatacg ggcggcagtc agacatccgc tggacacgga gcaggctccc acgcagcctt 2401 caacggcaat cccaactttc tttccattca aaacgctgcc gcggcggcgt acatcatgtc 2461 agcgggagca ggagtcgggg gaggtggagg aggagtaggc ggaggtggtg gctacatcaa 2521 ttgcggatca aacggagcag gaggaggagg tggtaatggc aatgccaatg gaaattcaaa 2581 tggaggtgga ggtggaggta cggttggcgg tggtggagca gcatcatcgg ctggtatcga 2641 tggtaataac cttttgaact tcgcgagtgg cctggccagt aatcctaact ataacgaatc 2701 caattccaaa ttccataatc caaactcaac gatgggtcat cctttttacg gtggcaatcc 2761 ttcagcgtac ggcatcatac tcaaggacga gccggacatc gagtacgacg aggcaaagat 2821 cgatataggc acctttgcgc agaacatcat ccaggcgaca atgggcagct ccgggcagtt 2881 caatgccagc gcctacgagg acgccatcat gtcggatctc gccagttcgc agtgccccaa 2941 cggcactgtg gatccactgc agtttacggc cacgctgatg ctcagctccc agacggacca 3001 tctgctggag cagctctcgg atgccgtcga tctgagctcg ttcctgcagc gaagctgtgt 3061 ggacgacgag ggctccacca gtccgcggca ggactttgag ctcggttcga cgccctccct 3121 gacgcccgac tcggtgtcgg tgacgcccgt ggagcatcac catcatcatc accacagcaa 3181 ccatcagagt gcgagcacag catcccagtt ggatgccctg cacgagaatc tgctcacaca 3241 gttgacccac aatatgacac gcaatggcgt taactcccag cagcagcagc aacagcaaca 3301 gcagcagcat gtgcaacagc agcagcagca cctgcagcag cagcaacagc acgtgcagca 3361 acaacatgtc cagcagcacg tgcaacatgt gcagcagccg ccgccttcgt accagcatgc 3421 caccagaggc ctgcagatga tgcaacaaca gcagcagtcg cagcacagca gctaccagca 3481 gcagtcggct ttaatgtcac agcagcagca gcaacagttg ctcagccagc agcagcaaca 3541 gtcgcaccac tcgcaccacc agcagcagca gcagcatcat gccgccgcct accagcagca 3601 caatctgtat gctgcccaac agcagcagcc acaccaccag cagcaacagc agcatcactc 3661 gcaccaccaa ttccaacagc aacagcagca gtctcaccac tcgcaccatt tgcaccacca 3721 cgacaacagc aacatgtcgc tgccatcgcc cacggccgct gctgccgctg cggctgctgc 3781 tgctgcagca gccgtacatt tggcgcgtcc catgagcagc agcagcagct ccggtacgaa 3841 cagcagcagc agcaacagca gcatggatgc aaatgcagcg gcagcggctg ccgccgccct 3901 gctcgacacg aagccactca ttcaaagctt gggcctgccg ccggatctac agctggagtt 3961 tgtgaatggc gggcatggca tcaagaatcc actggctgtg gagaatgccc atggtggcca 4021 tcaccggata cgcaacatcg attgcattga tgatctcagc aagcacggcc accactccca 4081 gcagcaacag cagcagcaat catcccccca gcagcagcag cagcagacgc tccagcaaca 4141 acaacaacaa cagcagcaac atcagcagca gcaatccctc cagcagcaac atcagcagca 4201 gcagcagcac cagcatcata gcagtgccag cagcaatgcc agtagccatg gctccgctga 4261 tgccctctgc atgggtggat ccggatcggc cagccaggcc ggtgatgatt ctggggtcaa 4321 tggcaagttc gtttgccgcg tttgcatgaa aacgttctcg ctgcagaggc tgctcaatcg 4381 gcatatgaag tgccactcgg acatcaagcg gtacctgtgc acgttctgtg gcaagggatt 4441 caacgatacc ttcgatctga agcggcacac gcgcacccac acgggcgtcc ggccgtacaa 4501 gtgcaatctg tgcgagaaga gcttcacaca gcgctgctcg ctcgagtcac actgccagaa 4561 ggtgcacagt gtccagcatc agtatgcgta taaagagcgt cgcgccaaga tgtacgtatg 4621 cgaggagtgc ggccacacga cctgcgagcc agaggtgcac tatctgcatc tgaaggattt 4681 gcatccattc tcgccggcgc ttctcaagtt ctacgataag cggcatttca agtttaccaa 4741 ttcgcagttt gccaacaatc tgctcggaca gctgccaatg cctgtccaca attgagttgt 4801 ggattgtcag tagttagatc ctaagatcct cccccaccat gtgactttga agttttctga 4861 aaactgcccc catgccccac cagaacacca gccccatacc taccgcccat tgctatagct 4921 atcggagcgt agaagggatg gtagatcttt ggagattata aattgcacta cacaattttt 4981 gtatattctt ttgcgtagat ttagatttag atttagtcga tagtcgatga tgaatcccaa 5041 caacactttg ctgtgcaaaa aatcgctctc actttttaac actcttaaac atttgtttaa 5101 caattttcgt ttttagttaa tgatggaatt ccacctttcg