Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_022354800 6815 bp mRNA linear INV 14-MAY-2021 (LOC111066307), transcript variant X2, mRNA. ACCESSION XM_022354800 VERSION XM_022354800.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022354800.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6815 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..6815 /gene="LOC111066307" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns" /db_xref="GeneID:111066307" CDS 852..5957 /gene="LOC111066307" /codon_start=1 /product="neurogenic protein mastermind isoform X2" /protein_id="XP_022210492.2" /db_xref="GeneID:111066307" /translation="MALSKRPLAKDTPLAESNSNNHNHSHSHSHSHSGGNSINNSSDL ETTAIKRRKRCSRDEDATLNNNNNNSNSNNNNILPQKKRKQGPILDSPESPPPTSVHT VGTVAAGIAKMTAPGGAADADQDDETLIRETQAALKSLSGSWPDARANLYRLQEQDEN PPPFQNLFEEKQKQKENDQARLNAGATLEDRERGKKLAPVTATGTALGGGPDDMDLEE AASNVYAQAASAFKPPIDFIKRNYAAAAHAHAHAQAQAHAHAHYTTSAYNASAATESA AGLAYYGYAAAAAASQQQQQQHQQHQQLSLEPTPLPPRAAFDIASQLGEKPSKTSKEP LLGALPGTGTGHGGSQVDAKQYTILQPAGVGSRAASVMQDIAREGVVGVPLVATPPST SSPPTAGGTAASTASATATLTSTSTPAPSYSPGSQNRADLEKHEKELHPLDKLKIASS HYLNNNNTSCINNNNNNNKLSATTMPIIKSEYSPVASIKSEYNKSPMHSYLANDAAGP GPGPASSVTASASTTPGTARTASGGGATNGGGGGGGGGTTSSNGGDANLHAPHLNRFV GMQSPPHPQSHHSHAHHVQQQQQQQQQQQQHTLHQQRGPFINEGNDGPDPSASYHTEH QQQQQQQQQQQQQQQQAEERQYEQMRYAVGGELLSSNGGANASELSPGTARSAYEAHP HPHPHPHPHPHPHPPTSLSSLSSASVGVGAPAFATVDSVSAVTVSTGAGGFERYDPNC CPNGQRQVASVAGVAAASASAAAAAAAYHYLPQSADDLQVQQQKYLQEQQLMLAKAEH EEQLANGGGAGPIYPRPMYHYDPTMGPLPPGFSAINLSVKMAAAQAAAAAAAYQNQQQ QQQQQQQQHHQQQQQQQQQQQQQQQQQQQQQQQQQQQQHGKQSSSPTPNVGGVPAPAV DLSGSTSVTSSSPHGFNSPASHNQYNQRMGNGSPQPGASPNIASPQVPSPQGQTLDLS VTRLPHSIITSPQYGADGLVVGHAQGFGSGAPGGALGPNGPPRSPQMEPVDFSGPPRP LGFGLVGHISGPRPYSRESTPDSGGSHYIETYRDPSGYSPHPGYGMVVQSDYPPAGYH GYGPAAYQCSNPYATAVGPGGYPTPVSGGYSPSPATCYSMPPPQHIPQHDKTKDGLTG CSRSDRNHLQSHSQELKCPTPGCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDGQDS EPLRCPIPGCDGSGHSTGKFLSHRSASGCPIANRNKMRVLEAGGTVEQHKAAVAAATA MKFDACTTVGGQGIKKPKFDEVTMVYPKGYTGGSGLDIVMSGVGSTGVGVGGLGLNVN VGLGVTSSSNNSAHSSLSSSNNSNGNGNGGNNEKSGGAAAASGNGSDDLNTLEAEISE LQRENARVESQMMRLKSDINAMESQLSTSDREASPLSGHQQQQRSSNVAMASPSGQSP FASVSSTSGTGTGAATSSSNNNGSNDLGHSISSLTPGTGHSNPNTNVGGMMSHAPVDG SVAPPNANLNNYYESLRNNVITLLEHVRLPPPPAPPTSVSVSASIAGGQLVAGHGLDS VCAGGQLIAGSGGDHATAYSTLLPPPPPPPSASSGNIGGGMYGHQGGTGTGGGPPPCP PPVPPHHAYTVHHPVSYAHPHSHPHGHPHGHPHGHPHPHPHEHFDSYISKLQSLCVPP DVYALPDDADRTVYNSVKPSMHQDYGKLMPTPI" misc_feature <3549..4256 /gene="LOC111066307" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" misc_feature 4338..4424 /gene="LOC111066307" /note="Zinc finger, C2HC type; Region: zf-C2HC; pfam01530" /db_xref="CDD:460240" misc_feature 4473..4559 /gene="LOC111066307" /note="Zinc finger, C2HC type; Region: zf-C2HC; pfam01530" /db_xref="CDD:460240" ORIGIN 1 ctgctgctgc gccgcacgct gctaacaccg ctgcttctgt cagcgtcgac gccaactgag 61 ctggtcgtcg cgctgctgcc gatgtaaaat tttattaccc caaaacgcat ccagcagtcg 121 ggttttggac gtccggacta caccgccgcc tcgctgagac agacgacttt tattgcaatt 181 ctctcgccca agcggcgaaa aagcggcccc agacccagag gccaacctct ttttagagaa 241 actaacggac ggagacagcg atacggagat acgcagaaac gtagacacac gaagagcagc 301 aaagaaagca cggagaacac aaaagaaacc acggagaagc acggaggcca cagagacatt 361 tcaaactttt gcgcggcatc aaagttacga caaaacaaca aaaaaaaaaa acaaaaaact 421 tttccaaact acgcgcaaaa ctaaaatcaa ctcttccgga ggtcgtgctg cttatagact 481 agtagcccca gccccagccc cttcttccga tccacaacac cctcttcccc cacacccctt 541 agcacccgat tttgaaacag tgcagtgcaa acaataaata agaaacaaaa cgaacaaaaa 601 caaaccgaaa tatagtggca acaacaattg tcccaaaaag tggaaagttc gcggcctaat 661 tgatattgcg tatacgcctc cgatgccgca aaatttgtgc acgctccatc ggccgatcta 721 ccaagaagaa ctttaaactg ttaaatccct gaagacgtcg aagcggcgtg ccgcagccga 781 accgttgaaa aattcataca aatttgaacc aaccaaacga actggcttag agcagtagag 841 ccacccacaa gatggcgctg tccaagcggc cactcgccaa ggatacgcct ttggcagaga 901 gcaacagcaa caaccacaac cacagccaca gtcacagcca cagccacagc ggtggcaaca 961 gcatcaacaa cagcagtgat ctggagacga cagctatcaa gcgccggaaa cgttgcagtc 1021 gcgatgagga tgcgacactc aacaacaaca acaacaacag taatagcaac aataacaaca 1081 tattgccaca aaagaaacga aaacagggcc ccatactgga tagccccgag agtccacctc 1141 cgacaagcgt ccacactgtc ggaacagtag ccgccggaat agccaagatg acagctccgg 1201 gcggcgccgc cgatgctgat caggatgatg agacactcat acgggagacg caggcggcat 1261 tgaagagtct gtccggtagc tggcccgatg cccgggccaa tctgtacaga ttgcaggagc 1321 aggacgagaa tccaccgccc ttccagaatc tcttcgaaga gaaacaaaaa cagaaggaga 1381 atgaccaggc ccgcctcaat gccggcgcca cgctcgagga tcgcgagcgg ggcaagaagc 1441 tggccccggt cacagcaact ggcacagctc tgggtggtgg accagacgac atggatctgg 1501 aggaggccgc cagcaatgtg tacgcccagg ccgcctcggc cttcaagccg cccatcgact 1561 tcatcaaacg caactatgcg gccgctgccc acgcccacgc ccatgcccag gcccaggccc 1621 atgcccatgc tcactacacg acaagcgcct acaatgcgtc cgcagcaaca gagtccgccg 1681 ccggattggc ctactatggc tatgcggcag ccgccgccgc cagtcaacag cagcagcagc 1741 agcatcaaca gcatcagcaa ttgagcctgg agccgactcc attgccacca cgggccgcct 1801 ttgacatagc cagccagctg ggcgaaaagc cttcaaagac cagcaaggag ccgctgttgg 1861 gagcattgcc aggaacgggc acaggtcatg gtgggtccca ggtggatgcc aaacagtata 1921 cgatcctgca gccggcaggc gtgggcagtc gggcagcctc agtgatgcag gacattgccc 1981 gggagggtgt tgtcggtgta cctctggttg ccactccacc atccacgagt agtccgccaa 2041 cagcaggagg aacagcagca tcgacagcat cagcgacagc gacattgaca tcgacatcga 2101 cgccggcgcc tagctactcg ccgggcagcc agaatcgcgc ggatttggag aagcacgaaa 2161 aggagctgca tccattggat aaactgaaga tcgcctccag tcactatctg aacaacaaca 2221 ataccagttg catcaacaac aataacaata acaacaagct gagtgcaaca acaatgccca 2281 ttatcaaatc ggagtacagt cctgtagcga gcatcaaatc ggagtacaac aaaagcccaa 2341 tgcactcata tctggccaac gatgcagccg gccccgggcc cggccccgcc tccagtgtga 2401 cggccagcgc atccacaaca ccgggcaccg ctcgcaccgc atccggcggt ggggcaacta 2461 acggtggtgg cggtggcggt ggcggtggca caacctcctc caatggtggc gatgccaatc 2521 tgcatgcccc gcacctgaat cgctttgtgg gcatgcagag tcctccccac ccacagagcc 2581 accactcaca cgcccaccac gtacagcagc agcagcagca gcagcaacag cagcagcaac 2641 acacactcca ccagcagcgc ggacccttta taaacgaggg caacgacggt cccgatcctt 2701 ctgccagcta ccacacggag caccagcaac agcagcaaca gcagcaacag caacagcaac 2761 agcagcagca ggccgaggag cggcagtacg agcagatgcg ctacgccgtg ggcggtgagc 2821 tgctgagtag caatggggga gccaatgcca gcgaactgtc gcctggaacg gcgaggagtg 2881 cctacgaggc gcatccccat ccgcatccac acccacatcc gcatccacat ccgcacccgc 2941 ccacctcgct cagctccctc agcagcgcat cggtgggggt gggggcgccc gcctttgcca 3001 cagttgactc cgtgtcggcg gtgaccgttt cgactggggc cggcggcttc gagcggtacg 3061 accccaactg ctgtcccaat ggacagcgcc aggtggcgtc tgtggcgggc gtggcagctg 3121 cctcagcatc ggcagcggcg gcggcggcag cctatcacta tctgccgcaa agcgccgacg 3181 atctgcaggt gcagcagcaa aagtatctgc aggagcagca gcttatgttg gccaaggccg 3241 agcacgagga acagttggcc aatggcggcg gtgcggggcc gatatatcca cggcccatgt 3301 accactacga tcccaccatg ggccccctgc cgccgggctt ctccgccatc aatctgtccg 3361 tgaaaatggc cgctgcccaa gcggccgccg ccgcagccgc ctatcagaac cagcagcagc 3421 agcaacaaca gcagcaacag caacaccacc agcagcagca gcagcagcaa cagcagcaac 3481 agcagcagca gcaacagcag cagcagcagc aacagcagca acagcaacag cagcacggca 3541 aacagagctc ctcgcccacc ccgaatgtgg gaggcgtgcc agcgccagcg gttgacctat 3601 ccggatccac atcggtgacc tcctccagtc cgcacggttt caattcacca gcctcccaca 3661 accaatacaa ccagcgcatg ggcaacggca gcccacagcc gggcgccagc cccaatatag 3721 ccagccccca ggtgcccagt ccgcagggac agaccctgga cctcagcgtc accagactcc 3781 cacacagcat catcaccagt ccccagtatg gggccgatgg ccttgtcgtg ggccatgccc 3841 agggatttgg cagcggagcg cccggcggag ctctgggccc caacggaccg ccgcgctccc 3901 cacaaatgga gcccgtcgat ttcagcggcc cgccgcgacc actaggcttc ggactggtcg 3961 gacacatcag tggaccgcgg ccctacagcc gtgaatccac gccggacagc ggcggttcac 4021 actacatcga gacgtacagg gatcccagcg gatactcgcc acatcccgga tacggcatgg 4081 tggtgcaatc ggactatcca ccggctggct atcatggcta tggcccagcc gcgtatcagt 4141 gcagcaatcc gtatgcgacg gcggtaggac ccggcggcta tccgacgccc gtctccggcg 4201 gctattcacc aagcccggcc acctgctact cgatgccacc gccgcagcac ataccgcagc 4261 acgacaagac caaggacgga ttgacgggct gctcgcgttc cgaccggaat catctgcaat 4321 cgcactcgca ggagctcaag tgccccacgc ccggctgcga tggctctggc catgtgaccg 4381 gcaactactc atcgcaccgc agcctctccg gatgtccacg ggccaataaa cccaaaagca 4441 agccgcgcga tggccaggac tcggagccgc tcagatgtcc cataccagga tgcgatggct 4501 ccggtcactc caccggcaag tttctctccc acagaagtgc ttcgggctgt cccatagcaa 4561 atcggaacaa gatgagagtc ctggaggctg ggggcactgt ggagcagcac aaggccgctg 4621 tggctgctgc cacagctatg aagttcgatg cctgcaccac tgtgggtggc cagggaatca 4681 agaagcccaa attcgatgag gtcaccatgg tctatcccaa gggttataca ggaggaagcg 4741 gcctggacat tgtcatgagc ggcgtgggca gcactggggt cggcgttgga ggccttggac 4801 tcaacgttaa tgttggcctt ggagtcacca gcagcagcaa caacagtgcc cacagcagtc 4861 tcagcagcag caacaacagc aacggcaacg gcaacggtgg caacaacgag aagagcggag 4921 gagcggcggc agcatccggc aatggtagcg acgatctaaa caccctggag gcggagatct 4981 ccgagctgca gcgggagaac gcccgtgtcg aatcgcagat gatgcgactc aagtccgaca 5041 tcaatgcgat ggagtcgcag ctgagcacca gcgatcggga ggcttctcca ttgagcggcc 5101 atcagcaaca gcagcgctcc tccaatgtgg ccatggcttc gcccagcggt caatcgccct 5161 tcgccagcgt tagctccacc agcggtaccg gcacaggtgc cgcaaccagc tccagcaaca 5221 acaacggaag caacgatctg ggccactcga tcagcagtct gacgccaggc accggccaca 5281 gcaacccaaa cacgaatgtc ggtggcatga tgtcgcatgc accggtggac gggagcgtgg 5341 ccccgcccaa tgccaatcta aacaactact acgagagttt gcgcaacaac gtgatcacgc 5401 tgctggagca tgtgcgcctg ccaccgccac cggcaccgcc cacttcggtc tctgtctcgg 5461 cctcgatcgc cggcggtcag ttggtggcgg gccatggcct ggacagtgtg tgcgccgggg 5521 gtcaactgat agccggcagc ggcggagatc acgccacggc ctactccaca ttgctgccgc 5581 cgccgccacc gccgccatcg gccagcagcg gtaatattgg tggcggaatg tacggtcatc 5641 agggtgggac gggtactggt ggtggcccgc caccgtgtcc accgccggtg ccgccgcatc 5701 atgcctatac cgtgcatcat cccgtcagct atgcccaccc acactcgcat ccgcacggac 5761 atccgcacgg ccatccgcac ggtcacccgc acccgcatcc gcacgagcac ttcgactctt 5821 acatctccaa gctgcagtcg ctctgcgttc cgcccgatgt ctatgccctg cccgatgacg 5881 ccgatcggac cgtctacaat tcggtgaagc caagcatgca ccaggactac ggcaaactga 5941 tgccgacacc catctaaacg aggaggatat caaactaaca gccggtatcc agccgatgtt 6001 ccatcccgtc cagggttcgt gagtgtgtat atatactacc caaagagtgg agaaaacaga 6061 ctatatgtaa gaattgtggt gtggggtatt gggtacagat gctttaacct gacgaacgag 6121 gcatctcccg agcccaagga tctttataca tatagcgcat ggatatctgt agagatctac 6181 gtatatagcg cgtgctcctg gaaaacggac agatcctttt cctagtgtta gattgagctg 6241 ttgcacatcc tatatcctag acgctttcgt cgtgttgata gaaactgtat aaagtattga 6301 aacctaatga aaaaaaaaaa caaaaataat aagtgtgtaa taatattaat tcataatacg 6361 atttacgatt aacaaatttt ttttttgtct gtatcaaata ctaaaagaaa actagaagtt 6421 atagaagcat acataaatat agaagtagga gtttaacaac gtacatatat gttaattgta 6481 gggcatttgt ttggtgttga tgtcttggtc aattttttgc atacaaaatg gataatgttc 6541 ttaaatgttt aatcaacccc tccacccaca cacacacacg caaaaacccc accccacccc 6601 agccctaaac cccaaagacc gagttctagt ccctcaaagt aagtttagtt tagagaaaaa 6661 gtcaaacacc aaaatgtgga gataaaatga tataataaaa aacataaacg agaaaatata 6721 ttcaatacta aagtatagag gatgtaatcg tgttacaatt tttttttttt tttgtaatat 6781 tgaatatgaa agggcaaatg tgtgtgtaat atcaa