Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_022354798 4922 bp mRNA linear INV 14-MAY-2021 (LOC111066307), transcript variant X4, mRNA. ACCESSION XM_022354798 VERSION XM_022354798.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022354798.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4922 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..4922 /gene="LOC111066307" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns" /db_xref="GeneID:111066307" CDS 855..4844 /gene="LOC111066307" /codon_start=1 /product="AF4/FMR2 family member lilli isoform X4" /protein_id="XP_022210490.2" /db_xref="GeneID:111066307" /translation="MALSKRPLAKDTPLAESNSNNHNHSHSHSHSHSGGNSINNSSDL ETTAIKRRKRCSRDEDATLNNNNNNSNSNNNNILPQKKRKQGPILDSPESPPPTSVHT VGTVAAGIAKMTAPGGAADADQDDETLIRETQAALKSLSGSWPDARANLYRLQEQDEN PPPFQNLFEEKQKYEAIAPRTPTTTATVSMFPRFHRQKENDQARLNAGATLEDRERGK KLAPVTATGTALGGGPDDMDLEEAASNVYAQAASAFKPPIDFIKRNYAAAAHAHAHAQ AQAHAHAHYTTSAYNASAATESAAGLAYYGYAAAAAASQQQQQQHQQHQQLSLEPTPL PPRAAFDIASQLGEKPSKTSKEPLLGALPGTGTGHGGSQVDAKQYTILQPAGVGSRAA SVMQDIAREGVVGVPLVATPPSTSSPPTAGGTAASTASATATLTSTSTPAPSYSPGSQ NRADLEKHEKELHPLDKLKIASSHYLNNNNTSCINNNNNNNKLSATTMPIIKSEYSPV ASIKSEYNKSPMHSYLANDAAGPGPGPASSVTASASTTPGTARTASGGGATNGGGGGG GGGTTSSNGGDANLHAPHLNRFVGMQSPPHPQSHHSHAHHVQQQQQQQQQQQQHTLHQ QRGPFINEGNDGPDPSASYHTEHQQQQQQQQQQQQQQQQAEERQYEQMRYAVGGELLS SNGGANASELSPGTARSAYEAHPHPHPHPHPHPHPHPPTSLSSLSSASVGVGAPAFAT VDSVSAVTVSTGAGGFERYDPNCCPNGQRQVASVAGVAAASASAAAAAAAYHYLPQSA DDLQVQQQKYLQEQQLMLAKAEHEEQLANGGGAGPIYPRPMYHYDPTMGPLPPGFSAI NLSVKMAAAQAAAAAAAYQNQQQQQQQQQQQHHQQQQQQQQQQQQQQQQQQQQQQQQQ QQQHGKQSSSPTPNVGGVPAPAVDLSGSTSVTSSSPHGFNSPASHNQYNQRMGNGSPQ PGASPNIASPQVPSPQGQTLDLSVTRLPHSIITSPQYGADGLVVGHAQGFGSGAPGGA LGPNGPPRSPQMEPVDFSGPPRPLGFGLVGHISGPRPYSRESTPDSGGSHYIETYRDP SGYSPHPGYGMVVQSDYPPAGYHGYGPAAYQCSNPYATAVGPGGYPTPVSGGYSPSPA TCYSMPPPQHIPQHDKTKDGLTGCSRSDRNHLQSHSQELKCPTPGCDGSGHVTGNYSS HRSLSGCPRANKPKSKPRDGQDSEPLRCPIPGCDGSGHSTGKFLSHRSASGCPIANRN KMRVLEAGGTVEQHKAAVAAATAMKFDACTTVGGQGIKKPKFDEVTMVYPKGYTDYAT FCIGAEYLL" misc_feature <3621..4328 /gene="LOC111066307" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" misc_feature 4410..4496 /gene="LOC111066307" /note="Zinc finger, C2HC type; Region: zf-C2HC; pfam01530" /db_xref="CDD:460240" misc_feature 4545..4631 /gene="LOC111066307" /note="Zinc finger, C2HC type; Region: zf-C2HC; pfam01530" /db_xref="CDD:460240" ORIGIN 1 ttgctgctgc tgcgccgcac gctgctaaca ccgctgcttc tgtcagcgtc gacgccaact 61 gagctggtcg tcgcgctgct gccgatgtaa aattttatta ccccaaaacg catccagcag 121 tcgggttttg gacgtccgga ctacaccgcc gcctcgctga gacagacgac ttttattgca 181 attctctcgc ccaagcggcg aaaaagcggc cccagaccca gaggccaacc tctttttaga 241 gaaactaacg gacggagaca gcgatacgga gatacgcaga aacgtagaca cacgaagagc 301 agcaaagaaa gcacggagaa cacaaaagaa accacggaga agcacggagg ccacagagac 361 atttcaaact tttgcgcggc atcaaagtta cgacaaaaca acaaaaaaaa aaaacaaaaa 421 acttttccaa actacgcgca aaactaaaat caactcttcc ggaggtcgtg ctgcttatag 481 actagtagcc ccagccccag ccccttcttc cgatccacaa caccctcttc ccccacaccc 541 cttagcaccc gattttgaaa cagtgcagtg caaacaataa ataagaaaca aaacgaacaa 601 aaacaaaccg aaatatagtg gcaacaacaa ttgtcccaaa aagtggaaag ttcgcggcct 661 aattgatatt gcgtatacgc ctccgatgcc gcaaaatttg tgcacgctcc atcggccgat 721 ctaccaagaa gaactttaaa ctgttaaatc cctgaagacg tcgaagcggc gtgccgcagc 781 cgaaccgttg aaaaattcat acaaatttga accaaccaaa cgaactggct tagagcagta 841 gagccaccca caagatggcg ctgtccaagc ggccactcgc caaggatacg cctttggcag 901 agagcaacag caacaaccac aaccacagcc acagtcacag ccacagccac agcggtggca 961 acagcatcaa caacagcagt gatctggaga cgacagctat caagcgccgg aaacgttgca 1021 gtcgcgatga ggatgcgaca ctcaacaaca acaacaacaa cagtaatagc aacaataaca 1081 acatattgcc acaaaagaaa cgaaaacagg gccccatact ggatagcccc gagagtccac 1141 ctccgacaag cgtccacact gtcggaacag tagccgccgg aatagccaag atgacagctc 1201 cgggcggcgc cgccgatgct gatcaggatg atgagacact catacgggag acgcaggcgg 1261 cattgaagag tctgtccggt agctggcccg atgcccgggc caatctgtac agattgcagg 1321 agcaggacga gaatccaccg cccttccaga atctcttcga agagaaacaa aagtatgagg 1381 ccattgcacc cagaactccc acaacaactg caactgtatc catgtttcca cgtttccaca 1441 gacagaagga gaatgaccag gcccgcctca atgccggcgc cacgctcgag gatcgcgagc 1501 ggggcaagaa gctggccccg gtcacagcaa ctggcacagc tctgggtggt ggaccagacg 1561 acatggatct ggaggaggcc gccagcaatg tgtacgccca ggccgcctcg gccttcaagc 1621 cgcccatcga cttcatcaaa cgcaactatg cggccgctgc ccacgcccac gcccatgccc 1681 aggcccaggc ccatgcccat gctcactaca cgacaagcgc ctacaatgcg tccgcagcaa 1741 cagagtccgc cgccggattg gcctactatg gctatgcggc agccgccgcc gccagtcaac 1801 agcagcagca gcagcatcaa cagcatcagc aattgagcct ggagccgact ccattgccac 1861 cacgggccgc ctttgacata gccagccagc tgggcgaaaa gccttcaaag accagcaagg 1921 agccgctgtt gggagcattg ccaggaacgg gcacaggtca tggtgggtcc caggtggatg 1981 ccaaacagta tacgatcctg cagccggcag gcgtgggcag tcgggcagcc tcagtgatgc 2041 aggacattgc ccgggagggt gttgtcggtg tacctctggt tgccactcca ccatccacga 2101 gtagtccgcc aacagcagga ggaacagcag catcgacagc atcagcgaca gcgacattga 2161 catcgacatc gacgccggcg cctagctact cgccgggcag ccagaatcgc gcggatttgg 2221 agaagcacga aaaggagctg catccattgg ataaactgaa gatcgcctcc agtcactatc 2281 tgaacaacaa caataccagt tgcatcaaca acaataacaa taacaacaag ctgagtgcaa 2341 caacaatgcc cattatcaaa tcggagtaca gtcctgtagc gagcatcaaa tcggagtaca 2401 acaaaagccc aatgcactca tatctggcca acgatgcagc cggccccggg cccggccccg 2461 cctccagtgt gacggccagc gcatccacaa caccgggcac cgctcgcacc gcatccggcg 2521 gtggggcaac taacggtggt ggcggtggcg gtggcggtgg cacaacctcc tccaatggtg 2581 gcgatgccaa tctgcatgcc ccgcacctga atcgctttgt gggcatgcag agtcctcccc 2641 acccacagag ccaccactca cacgcccacc acgtacagca gcagcagcag cagcagcaac 2701 agcagcagca acacacactc caccagcagc gcggaccctt tataaacgag ggcaacgacg 2761 gtcccgatcc ttctgccagc taccacacgg agcaccagca acagcagcaa cagcagcaac 2821 agcaacagca acagcagcag caggccgagg agcggcagta cgagcagatg cgctacgccg 2881 tgggcggtga gctgctgagt agcaatgggg gagccaatgc cagcgaactg tcgcctggaa 2941 cggcgaggag tgcctacgag gcgcatcccc atccgcatcc acacccacat ccgcatccac 3001 atccgcaccc gcccacctcg ctcagctccc tcagcagcgc atcggtgggg gtgggggcgc 3061 ccgcctttgc cacagttgac tccgtgtcgg cggtgaccgt ttcgactggg gccggcggct 3121 tcgagcggta cgaccccaac tgctgtccca atggacagcg ccaggtggcg tctgtggcgg 3181 gcgtggcagc tgcctcagca tcggcagcgg cggcggcggc agcctatcac tatctgccgc 3241 aaagcgccga cgatctgcag gtgcagcagc aaaagtatct gcaggagcag cagcttatgt 3301 tggccaaggc cgagcacgag gaacagttgg ccaatggcgg cggtgcgggg ccgatatatc 3361 cacggcccat gtaccactac gatcccacca tgggccccct gccgccgggc ttctccgcca 3421 tcaatctgtc cgtgaaaatg gccgctgccc aagcggccgc cgccgcagcc gcctatcaga 3481 accagcagca gcagcaacaa cagcagcaac agcaacacca ccagcagcag cagcagcagc 3541 aacagcagca acagcagcag cagcaacagc agcagcagca gcaacagcag caacagcaac 3601 agcagcacgg caaacagagc tcctcgccca ccccgaatgt gggaggcgtg ccagcgccag 3661 cggttgacct atccggatcc acatcggtga cctcctccag tccgcacggt ttcaattcac 3721 cagcctccca caaccaatac aaccagcgca tgggcaacgg cagcccacag ccgggcgcca 3781 gccccaatat agccagcccc caggtgccca gtccgcaggg acagaccctg gacctcagcg 3841 tcaccagact cccacacagc atcatcacca gtccccagta tggggccgat ggccttgtcg 3901 tgggccatgc ccagggattt ggcagcggag cgcccggcgg agctctgggc cccaacggac 3961 cgccgcgctc cccacaaatg gagcccgtcg atttcagcgg cccgccgcga ccactaggct 4021 tcggactggt cggacacatc agtggaccgc ggccctacag ccgtgaatcc acgccggaca 4081 gcggcggttc acactacatc gagacgtaca gggatcccag cggatactcg ccacatcccg 4141 gatacggcat ggtggtgcaa tcggactatc caccggctgg ctatcatggc tatggcccag 4201 ccgcgtatca gtgcagcaat ccgtatgcga cggcggtagg acccggcggc tatccgacgc 4261 ccgtctccgg cggctattca ccaagcccgg ccacctgcta ctcgatgcca ccgccgcagc 4321 acataccgca gcacgacaag accaaggacg gattgacggg ctgctcgcgt tccgaccgga 4381 atcatctgca atcgcactcg caggagctca agtgccccac gcccggctgc gatggctctg 4441 gccatgtgac cggcaactac tcatcgcacc gcagcctctc cggatgtcca cgggccaata 4501 aacccaaaag caagccgcgc gatggccagg actcggagcc gctcagatgt cccataccag 4561 gatgcgatgg ctccggtcac tccaccggca agtttctctc ccacagaagt gcttcgggct 4621 gtcccatagc aaatcggaac aagatgagag tcctggaggc tgggggcact gtggagcagc 4681 acaaggccgc tgtggctgct gccacagcta tgaagttcga tgcctgcacc actgtgggtg 4741 gccagggaat caagaagccc aaattcgatg aggtcaccat ggtctatccc aagggttata 4801 cagattacgc aacattttgt atcggtgccg agtatctact gtagatagaa aatgaaactg 4861 atcaaaaaca gtccgaaata tcgaaaacct gaaaccacaa ccaccaacca aaaataaatg 4921 aa