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LOCUS XM_022354797 5037 bp mRNA linear INV 14-MAY-2021 (LOC111066307), transcript variant X3, mRNA. ACCESSION XM_022354797 VERSION XM_022354797.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022354797.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5037 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..5037 /gene="LOC111066307" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns" /db_xref="GeneID:111066307" CDS 856..4959 /gene="LOC111066307" /codon_start=1 /product="neurogenic protein mastermind isoform X3" /protein_id="XP_022210489.2" /db_xref="GeneID:111066307" /translation="MALSKRPLAKDTPLAESNSNNHNHSHSHSHSHSGGNSINNSSDL ETTAIKRRKRCSRDEDATLNNNNNNSNSNNNNILPQKKRKQGPILDSPESPPPTSVHT VGTVAAGIAKMTAPGGAADADQDDETLIRETQAALKSLSGSWPDARANLYRLQEQDEN PPPFQNLFEEKQKYEAIAPRTPTTTATVSMFPRFHRQKENDQARLNAGATLEDRERGK KLAPVTATGTALGGGPDDMDLEEAASNVYAQAASAFKPPIDFIKRNYAAAAHAHAHAQ AQAHAHAHYTTSAYNASAATESAAGLAYYGYAAAAAASQQQQQQHQQHQQLSLEPTPL PPRAAFDIASQLGEKPSKTSKEPLLGALPGTGTGHGGSQVDAKQYTILQPAGVGSRAA SVMQDIAREGVVGVPLVATPPSTSSPPTAGGTAASTASATATLTSTSTPAPSYSPGSQ NRDGAKCPTPHCTGQGHVTGLYSHHRSLSGCPKRDKVTTESDLEKHEKELHPLDKLKI ASSHYLNNNNTSCINNNNNNNKLSATTMPIIKSEYSPVASIKSEYNKSPMHSYLANDA AGPGPGPASSVTASASTTPGTARTASGGGATNGGGGGGGGGTTSSNGGDANLHAPHLN RFVGMQSPPHPQSHHSHAHHVQQQQQQQQQQQQHTLHQQRGPFINEGNDGPDPSASYH TEHQQQQQQQQQQQQQQQQAEERQYEQMRYAVGGELLSSNGGANASELSPGTARSAYE AHPHPHPHPHPHPHPHPPTSLSSLSSASVGVGAPAFATVDSVSAVTVSTGAGGFERYD PNCCPNGQRQVASVAGVAAASASAAAAAAAYHYLPQSADDLQVQQQKYLQEQQLMLAK AEHEEQLANGGGAGPIYPRPMYHYDPTMGPLPPGFSAINLSVKMAAAQAAAAAAAYQN QQQQQQQQQQQHHQQQQQQQQQQQQQQQQQQQQQQQQQQQQHGKQSSSPTPNVGGVPA PAVDLSGSTSVTSSSPHGFNSPASHNQYNQRMGNGSPQPGASPNIASPQVPSPQGQTL DLSVTRLPHSIITSPQYGADGLVVGHAQGFGSGAPGGALGPNGPPRSPQMEPVDFSGP PRPLGFGLVGHISGPRPYSRESTPDSGGSHYIETYRDPSGYSPHPGYGMVVQSDYPPA GYHGYGPAAYQCSNPYATAVGPGGYPTPVSGGYSPSPATCYSMPPPQHIPQHDKTKDG LTGCSRSDRNHLQSHSQELKCPTPGCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDG QDSEPLRCPIPGCDGSGHSTGKFLSHRSASGCPIANRNKMRVLEAGGTVEQHKAAVAA ATAMKFDACTTVGGQGIKKPKFDEVTMVYPKGYTDYATFCIGAEYLL" misc_feature 2221..2304 /gene="LOC111066307" /note="Zinc finger, C2HC type; Region: zf-C2HC; pfam01530" /db_xref="CDD:460240" misc_feature <3736..4443 /gene="LOC111066307" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" misc_feature 4525..4611 /gene="LOC111066307" /note="Zinc finger, C2HC type; Region: zf-C2HC; pfam01530" /db_xref="CDD:460240" misc_feature 4660..4746 /gene="LOC111066307" /note="Zinc finger, C2HC type; Region: zf-C2HC; pfam01530" /db_xref="CDD:460240" ORIGIN 1 attgctgctg ctgcgccgca cgctgctaac accgctgctt ctgtcagcgt cgacgccaac 61 tgagctggtc gtcgcgctgc tgccgatgta aaattttatt accccaaaac gcatccagca 121 gtcgggtttt ggacgtccgg actacaccgc cgcctcgctg agacagacga cttttattgc 181 aattctctcg cccaagcggc gaaaaagcgg ccccagaccc agaggccaac ctctttttag 241 agaaactaac ggacggagac agcgatacgg agatacgcag aaacgtagac acacgaagag 301 cagcaaagaa agcacggaga acacaaaaga aaccacggag aagcacggag gccacagaga 361 catttcaaac ttttgcgcgg catcaaagtt acgacaaaac aacaaaaaaa aaaaacaaaa 421 aacttttcca aactacgcgc aaaactaaaa tcaactcttc cggaggtcgt gctgcttata 481 gactagtagc cccagcccca gccccttctt ccgatccaca acaccctctt cccccacacc 541 ccttagcacc cgattttgaa acagtgcagt gcaaacaata aataagaaac aaaacgaaca 601 aaaacaaacc gaaatatagt ggcaacaaca attgtcccaa aaagtggaaa gttcgcggcc 661 taattgatat tgcgtatacg cctccgatgc cgcaaaattt gtgcacgctc catcggccga 721 tctaccaaga agaactttaa actgttaaat ccctgaagac gtcgaagcgg cgtgccgcag 781 ccgaaccgtt gaaaaattca tacaaatttg aaccaaccaa acgaactggc ttagagcagt 841 agagccaccc acaagatggc gctgtccaag cggccactcg ccaaggatac gcctttggca 901 gagagcaaca gcaacaacca caaccacagc cacagtcaca gccacagcca cagcggtggc 961 aacagcatca acaacagcag tgatctggag acgacagcta tcaagcgccg gaaacgttgc 1021 agtcgcgatg aggatgcgac actcaacaac aacaacaaca acagtaatag caacaataac 1081 aacatattgc cacaaaagaa acgaaaacag ggccccatac tggatagccc cgagagtcca 1141 cctccgacaa gcgtccacac tgtcggaaca gtagccgccg gaatagccaa gatgacagct 1201 ccgggcggcg ccgccgatgc tgatcaggat gatgagacac tcatacggga gacgcaggcg 1261 gcattgaaga gtctgtccgg tagctggccc gatgcccggg ccaatctgta cagattgcag 1321 gagcaggacg agaatccacc gcccttccag aatctcttcg aagagaaaca aaagtatgag 1381 gccattgcac ccagaactcc cacaacaact gcaactgtat ccatgtttcc acgtttccac 1441 agacagaagg agaatgacca ggcccgcctc aatgccggcg ccacgctcga ggatcgcgag 1501 cggggcaaga agctggcccc ggtcacagca actggcacag ctctgggtgg tggaccagac 1561 gacatggatc tggaggaggc cgccagcaat gtgtacgccc aggccgcctc ggccttcaag 1621 ccgcccatcg acttcatcaa acgcaactat gcggccgctg cccacgccca cgcccatgcc 1681 caggcccagg cccatgccca tgctcactac acgacaagcg cctacaatgc gtccgcagca 1741 acagagtccg ccgccggatt ggcctactat ggctatgcgg cagccgccgc cgccagtcaa 1801 cagcagcagc agcagcatca acagcatcag caattgagcc tggagccgac tccattgcca 1861 ccacgggccg cctttgacat agccagccag ctgggcgaaa agccttcaaa gaccagcaag 1921 gagccgctgt tgggagcatt gccaggaacg ggcacaggtc atggtgggtc ccaggtggat 1981 gccaaacagt atacgatcct gcagccggca ggcgtgggca gtcgggcagc ctcagtgatg 2041 caggacattg cccgggaggg tgttgtcggt gtacctctgg ttgccactcc accatccacg 2101 agtagtccgc caacagcagg aggaacagca gcatcgacag catcagcgac agcgacattg 2161 acatcgacat cgacgccggc gcctagctac tcgccgggca gccagaatcg cgatggcgcc 2221 aaatgcccca cgccgcattg cactggccaa ggacatgtca ccggattgta ttcgcatcat 2281 cgcagtttat cgggttgtcc gaagcgcgat aaggttacca cagaatcgga tttggagaag 2341 cacgaaaagg agctgcatcc attggataaa ctgaagatcg cctccagtca ctatctgaac 2401 aacaacaata ccagttgcat caacaacaat aacaataaca acaagctgag tgcaacaaca 2461 atgcccatta tcaaatcgga gtacagtcct gtagcgagca tcaaatcgga gtacaacaaa 2521 agcccaatgc actcatatct ggccaacgat gcagccggcc ccgggcccgg ccccgcctcc 2581 agtgtgacgg ccagcgcatc cacaacaccg ggcaccgctc gcaccgcatc cggcggtggg 2641 gcaactaacg gtggtggcgg tggcggtggc ggtggcacaa cctcctccaa tggtggcgat 2701 gccaatctgc atgccccgca cctgaatcgc tttgtgggca tgcagagtcc tccccaccca 2761 cagagccacc actcacacgc ccaccacgta cagcagcagc agcagcagca gcaacagcag 2821 cagcaacaca cactccacca gcagcgcgga ccctttataa acgagggcaa cgacggtccc 2881 gatccttctg ccagctacca cacggagcac cagcaacagc agcaacagca gcaacagcaa 2941 cagcaacagc agcagcaggc cgaggagcgg cagtacgagc agatgcgcta cgccgtgggc 3001 ggtgagctgc tgagtagcaa tgggggagcc aatgccagcg aactgtcgcc tggaacggcg 3061 aggagtgcct acgaggcgca tccccatccg catccacacc cacatccgca tccacatccg 3121 cacccgccca cctcgctcag ctccctcagc agcgcatcgg tgggggtggg ggcgcccgcc 3181 tttgccacag ttgactccgt gtcggcggtg accgtttcga ctggggccgg cggcttcgag 3241 cggtacgacc ccaactgctg tcccaatgga cagcgccagg tggcgtctgt ggcgggcgtg 3301 gcagctgcct cagcatcggc agcggcggcg gcggcagcct atcactatct gccgcaaagc 3361 gccgacgatc tgcaggtgca gcagcaaaag tatctgcagg agcagcagct tatgttggcc 3421 aaggccgagc acgaggaaca gttggccaat ggcggcggtg cggggccgat atatccacgg 3481 cccatgtacc actacgatcc caccatgggc cccctgccgc cgggcttctc cgccatcaat 3541 ctgtccgtga aaatggccgc tgcccaagcg gccgccgccg cagccgccta tcagaaccag 3601 cagcagcagc aacaacagca gcaacagcaa caccaccagc agcagcagca gcagcaacag 3661 cagcaacagc agcagcagca acagcagcag cagcagcaac agcagcaaca gcaacagcag 3721 cacggcaaac agagctcctc gcccaccccg aatgtgggag gcgtgccagc gccagcggtt 3781 gacctatccg gatccacatc ggtgacctcc tccagtccgc acggtttcaa ttcaccagcc 3841 tcccacaacc aatacaacca gcgcatgggc aacggcagcc cacagccggg cgccagcccc 3901 aatatagcca gcccccaggt gcccagtccg cagggacaga ccctggacct cagcgtcacc 3961 agactcccac acagcatcat caccagtccc cagtatgggg ccgatggcct tgtcgtgggc 4021 catgcccagg gatttggcag cggagcgccc ggcggagctc tgggccccaa cggaccgccg 4081 cgctccccac aaatggagcc cgtcgatttc agcggcccgc cgcgaccact aggcttcgga 4141 ctggtcggac acatcagtgg accgcggccc tacagccgtg aatccacgcc ggacagcggc 4201 ggttcacact acatcgagac gtacagggat cccagcggat actcgccaca tcccggatac 4261 ggcatggtgg tgcaatcgga ctatccaccg gctggctatc atggctatgg cccagccgcg 4321 tatcagtgca gcaatccgta tgcgacggcg gtaggacccg gcggctatcc gacgcccgtc 4381 tccggcggct attcaccaag cccggccacc tgctactcga tgccaccgcc gcagcacata 4441 ccgcagcacg acaagaccaa ggacggattg acgggctgct cgcgttccga ccggaatcat 4501 ctgcaatcgc actcgcagga gctcaagtgc cccacgcccg gctgcgatgg ctctggccat 4561 gtgaccggca actactcatc gcaccgcagc ctctccggat gtccacgggc caataaaccc 4621 aaaagcaagc cgcgcgatgg ccaggactcg gagccgctca gatgtcccat accaggatgc 4681 gatggctccg gtcactccac cggcaagttt ctctcccaca gaagtgcttc gggctgtccc 4741 atagcaaatc ggaacaagat gagagtcctg gaggctgggg gcactgtgga gcagcacaag 4801 gccgctgtgg ctgctgccac agctatgaag ttcgatgcct gcaccactgt gggtggccag 4861 ggaatcaaga agcccaaatt cgatgaggtc accatggtct atcccaaggg ttatacagat 4921 tacgcaacat tttgtatcgg tgccgagtat ctactgtaga tagaaaatga aactgatcaa 4981 aaacagtccg aaatatcgaa aacctgaaac cacaaccacc aaccaaaaat aaatgaa