PREDICTED: Drosophila obscura zinc finger protein 708
LOCUS XM_022354769 2215 bp mRNA linear INV 14-MAY-2021
(LOC111066290), mRNA.
ACCESSION XM_022354769
VERSION XM_022354769.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022354769.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..2215
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..2215
/gene="LOC111066290"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 1 Protein, and 100% coverage of
the annotated genomic feature by RNAseq alignments"
/db_xref="GeneID:111066290"
CDS 67..1389
/gene="LOC111066290"
/codon_start=1
/product="zinc finger protein 708"
/protein_id="XP_022210461.2"
/db_xref="GeneID:111066290"
/translation="MNRKLTRETAQQHCLTCLLKLDSEQDPVEVANSQELQHLLHQHL
DWPLEEELQLEKWLPQQLCPPCRQELQRFEQFRRRAIECRLQLLDLLKEDQCTEPSFE
IVYEEPATEGQDEESLHSLEPPDPDPDPDPIDEPAAATRPESGQGQTENEAKAEKRTS
RGARNSLKCSLCQHSFAHKLTLSAHIRKVHEGSKRPFQCDQCDKCYSFMGGLYTHIKE
IHATRERRYPCDQPGCDRVYTSSIAMQKHKRLKHSTKEPVRKFICEQCGATFNQSANL
NYHRRTKHPTEDEVAARDSGSEQHFCELCQKHFHSRYTLRYHTMQQHGDQEGLLPHVC
QVCGRRMAKKFMLLQHMLMHSTDKMPCEHCGKLFARKFELEAHIRAVHLKLKPFACKY
CSECFASRKTLRHHEYIHTGEKPYVCDVCGQGFRQQTCLKNHRKVHDK"
misc_feature 103..327
/gene="LOC111066290"
/note="Zinc-finger associated domain (zf-AD); Region:
zf-AD; pfam07776"
/db_xref="CDD:462262"
misc_feature 571..636
/gene="LOC111066290"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
misc_feature 661..726
/gene="LOC111066290"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
misc_feature order(676..678,682..684,688..690,694..699,706..711,
721..723,772..774,778..780,790..795,802..807,814..816,
868..870,874..876,880..882,886..891,898..903,910..912)
/gene="LOC111066290"
/note="putative nucleic acid binding site [nucleotide
binding]; other site"
/db_xref="CDD:275368"
misc_feature <736..918
/gene="LOC111066290"
/note="Putative transcriptional repressor regulating G2/M
transition [Transcription / Cell division and chromosome
partitioning]; Region: SFP1; COG5189"
/db_xref="CDD:227516"
misc_feature 751..822
/gene="LOC111066290"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
misc_feature 853..912
/gene="LOC111066290"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
misc_feature 970..1035
/gene="LOC111066290"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
misc_feature 1066..1128
/gene="LOC111066290"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
misc_feature 1147..1212
/gene="LOC111066290"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
misc_feature order(1162..1164,1168..1170,1174..1176,1180..1185,
1192..1197,1207..1209,1249..1251,1255..1257,1267..1272,
1279..1284,1291..1293,1333..1335,1339..1341,1345..1347,
1351..1356,1363..1368,1375..1377)
/gene="LOC111066290"
/note="putative nucleic acid binding site [nucleotide
binding]; other site"
/db_xref="CDD:275368"
misc_feature 1234..1296
/gene="LOC111066290"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
misc_feature 1318..1380
/gene="LOC111066290"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
ORIGIN
1 taaagcttca acctcggtat agaacaagag aacttttttt gtttatatcg cggaaaaggc
61 cgcaggatga accggaaact gaccagggag acggcccagc agcactgtct cacctgcctg
121 ttgaagctgg acagcgaaca ggatccggtt gaggtggcca acagccagga gctgcagcat
181 ctgctgcacc aacacctgga ctggccgctg gaagaagagc tccagctgga gaagtggctg
241 ccgcagcagc tgtgcccgcc ctgtcgtcaa gaactgcagc gtttcgagca gttccgacgg
301 cgggcgatcg agtgccgtct ccagctgctg gacctgctga aggaggacca gtgcacggag
361 ccctcgttcg agattgtgta cgaggagcca gcaactgagg gtcaggacga agagtcgctg
421 cacagcctgg aaccaccgga ccccgaccca gatcccgatc ccatcgacga gcctgctgca
481 gcaacacggc cagaaagtgg acagggccag acggagaacg aggccaaggc ggagaagcga
541 acctcacggg gcgcgagaaa cagcctgaaa tgcagcctgt gccagcacag cttcgcccac
601 aagctcaccc tgtccgccca catccgcaag gtgcacgagg gcagcaagcg gccgttccag
661 tgcgaccagt gcgacaaatg ttacagcttc atgggcggcc tctacacaca catcaaggag
721 atccatgcga cgcgcgagcg ccgctatccg tgcgaccagc ccggctgcga tcgcgtctac
781 accagctcca ttgccatgca gaagcacaaa agactgaagc acagcaccaa ggagccggtg
841 cgtaagttca tctgcgagca gtgtggggcc accttcaacc agtcggccaa cctgaactac
901 caccgacgca ccaagcaccc caccgaggat gaggtggccg ccagggacag cggcagcgag
961 caacactttt gcgagctctg ccagaagcac tttcactccc gctacaccct gcgctaccac
1021 accatgcagc agcatggcga ccaggagggc ctcctgccgc acgtgtgcca ggtgtgcggc
1081 cgccgcatgg ccaagaagtt catgctgctg cagcacatgc tgatgcactc caccgacaag
1141 atgccctgcg agcattgcgg caagctgttc gcccgcaagt tcgagctgga ggcccacatc
1201 cgagcggtgc acctcaagct gaagcccttc gcctgcaagt actgctcgga gtgttttgcc
1261 tcgcgcaaaa ccctgcgcca ccacgaatac atccacactg gcgagaagcc gtatgtgtgc
1321 gatgtgtgtg gccagggatt ccggcagcag acgtgcctca agaaccaccg caaggttcac
1381 gacaaatagg agacacacac gctggaattg tctgtcaaac aagtgaaatt taattagcat
1441 tagtcaatac aatagttctt acagaatata gttgtagttt atgggtgggg gtggttagtc
1501 cgcagccttt gcctgattgg ccggcggctt ctgctcgcgc tctatgtaga cgggcagatc
1561 ttcgagcggc ttgtagtaca gatgcaccgc ctgggatccg gccatcatgg ccagcattgc
1621 gctggccagg aacttgctgt attgagccca cgacacgcca gcgggcatga ttccctcagt
1681 tatgcgacta ctgctgctgc tgctgctgct gttgctgctg atgatgctgc tgctcctcca
1741 cgtaattctt ggcctggcga cgcttaaaag tactatctgc aagcggaaaa tacccagatt
1801 agacagggac agaagacgca gatgcacaga aaacggcggg gaagggcaca tacagaaatt
1861 cgtttcgccc accgtccagt tgatcatgga gaactcaagg gcggcgccca gcacaaagaa
1921 gagcggcagg aagcggtaga tgccaaagcg tcgcttgccg ggccaactgt cgagcagacg
1981 tcgcacggag ccgctatata gattcatgtg tctggccgca gcgaggggga attatataat
2041 ttcgtgctga ctgctggcgg ttaatgtgcg cgggcgtttg tctgctttgg ccgctgcgga
2101 ttcaagcatc catcaaactc tgtctgccct cgaagcagct aacggaaact cagcaagtta
2161 gctgggaatt tttaaatttt ttaaaaaagt tctgtgcttt ttgtaccgtc gctat