Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_022354710 3563 bp mRNA linear INV 14-MAY-2021 (LOC111066255), mRNA. ACCESSION XM_022354710 VERSION XM_022354710.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq; includes ab initio. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022354710.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..3563 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..3563 /gene="LOC111066255" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:111066255" CDS 492..3563 /gene="LOC111066255" /codon_start=1 /product="uncharacterized protein LOC111066255" /protein_id="XP_022210402.2" /db_xref="GeneID:111066255" /translation="MDTQLDARVQFPASFPDTFKNFFDMMNEDEDHEGLFAHMLEDKV IPIPRPKPRKMHPQRGRCGGSLRSREDSFERSYRLRLQRQQQQHQQQLLQDQQYQHRQ HLQQVHNMQRGRRASISGDEFYRETSDITESLGHYHYLASGRVHTLRSSNDRNAQHIN NPGRSQLGIGPSVLNPNVSSSSSGSMRQLPVATTSGSHVPVPVPVPLGEQRMTPLTGT DHLRFMLQAQPDVRLQLEASSVVTSSYTPSPAEASSEYCPRHIEPSPDPLRFNHRLLP VNGARDVAEAVNALERMELQEDGENVNCLGRSFDCENSPMFEMERVGVVPQRLLPIPP VHSRRGSGGYRGLPVGQPWVQQDNDLNRIPAVPVAHGHNQIRFVEPRNIESVEDIQAW QPPPQYEEYILAAQHPGGSRQEMAPRSFATESSMQHSGRHYVQPEVHPRILHSVEHRE LPEGSRVLTMHQAMSGAVSPQYGIVGDHQPTAYGELRAHTGMAVVSAMSSGAEAIGSE AAGCNIPKRVRQVHIEREPPIGGEASTTQGQRHSSSGILMMPTLSSRLAPRQRRRTSS MPAECRRPQHAEMRQAVKHAEEDQGIEYYRLRSFSITSNGVCNLGDSLRSRRSRSNNS VTSGGTSSYSGIRNNNRDAWGNIIDAQQTPSGEPPTFKIAMLGSPSVGKSALSFQFTT SDYICAYDLSLEMEYGQKTVSVLVDDVESDIEVVDHPACEMSTEAFCATYNIDLFVVV YSVLDVRSFRNAERVLHYLRDNDMLLSRGAILVGNKADLERHRTVPQEIGHKVATEIP CKFIETSAGLCHNVNELLVGVVAQVKLNPQRLSMLSPADLERVNMQSSIQNHRRMHLE RQLSLYRSDHGLGPEADVDSHRPPISLKDILNVGESDREDGDESEAQRRRRFLTQFEL LAANLRNHSGRPLPISPFSKRRSIAGNATATSDNMFPRLQRRATDDSHLGGGISTRSE CRKPLFHFSCNGRVKKMTARTKGFVSSLLRFKASHWLSRRTSSSCTDLFGI" misc_feature 2472..>2981 /gene="LOC111066255" /note="Members of the P-loop NTPase domain superfamily are characterized by a conserved nucleotide phosphate-binding motif, also referred to as the Walker A motif (GxxxxGK[S/T], where x is any residue), and the Walker B motif (hhhh[D/E], where h is a...; Region: P-loop containing Nucleoside Triphosphate Hydrolases; cl38936" /db_xref="CDD:476819" misc_feature 2490..2513 /gene="LOC111066255" /note="G1 box; other site" /db_xref="CDD:206715" misc_feature order(2496..2516,2649..2651,2814..2819,2823..2825, 2904..2912) /gene="LOC111066255" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206715" misc_feature 2562..2564 /gene="LOC111066255" /note="G2 box; other site" /db_xref="CDD:206715" misc_feature 2577..2585 /gene="LOC111066255" /note="Switch I region; other site" /db_xref="CDD:206715" misc_feature 2640..2651 /gene="LOC111066255" /note="G3 box; other site" /db_xref="CDD:206715" misc_feature order(2646..2651,2694..2699) /gene="LOC111066255" /note="Switch II region; other site" /db_xref="CDD:206715" misc_feature 2814..2825 /gene="LOC111066255" /note="G4 box; other site" /db_xref="CDD:206715" misc_feature 2904..2912 /gene="LOC111066255" /note="G5 box; other site" /db_xref="CDD:206715" ORIGIN 1 gaaacaactg taaaacactt caagctagtg aaattagcca cagcacagtc tatgggctgt 61 tggtcaaaca attacgacaa cactccgatt gactgcataa gagtcaaaat caaagttact 121 aaaaagaaga acacagccaa aagagctaac tcaaatcatc gaaactaaca atttggagga 181 agctctgcaa caaaactgtt ttggcaattg atccagattt ttgaacttgt acttgacttt 241 caaaattaac cttatcgaat ttaaagaacc gaagaagacg tcgatttcca ttggaaattt 301 caaccactga cagtcgtcgt cgtggggcca cgtacccgta tccgtgcctc tcctaaaaca 361 tatttctcgc caagaaaaag accaaatata ggagcagaaa gaagcccaga agagagcaga 421 aagagaagag aagtgaatag gaaacaatta gagagagaac gaaaacgaaa gcgtaagaaa 481 gggggatcgc catggatacc cagctggatg cgcgggttca gtttccggcc tcgtttccgg 541 atacattcaa gaacttcttc gacatgatga acgaagatga ggaccatgaa gggctctttg 601 cccacatgct agaggataag gtcataccca taccgcgacc taagcccaga aagatgcacc 661 cgcagcgagg acgctgcgga ggcagcctgc ggagccgtga ggacagcttc gagcgcagct 721 accggctgcg gctgcagagg cagcagcaac agcaccagca gcagctgctg caggatcagc 781 aataccaaca caggcagcat ctgcagcagg tgcacaatat gcagcgcggt cgacgcgcca 841 gcattagcgg tgatgaattc tatcgcgaga cgagcgatat tactgaatcg ttgggccact 901 accactactt ggcctccgga cgcgtccaca cgctgcgctc gagcaatgac aggaacgctc 961 agcatatcaa caatccagga cgcagccaac tcggcattgg acccagtgtt ctgaacccga 1021 atgtaagttc cagctcaagt ggttcgatga ggcaactgcc ggtggctaca accagcggca 1081 gtcacgtacc agtaccagta ccagtaccac tcggtgagca gcgaatgaca ccgctgacgg 1141 gcaccgacca tctcaggttc atgcttcagg cacagccaga tgtccggctc cagttagagg 1201 ccagcagtgt tgtgacgagt agttacaccc cgtcccccgc tgaagcttcc agcgaatatt 1261 gccccaggca cattgaacca tcaccggacc cgttgagatt caaccatcgc ctgctgcctg 1321 tcaatggagc cagagatgtg gccgaagcgg tcaatgcttt ggagcgaatg gagctgcagg 1381 aagacggtga aaatgtaaac tgtttggggc gttcttttga ctgcgagaat tccccaatgt 1441 ttgagatgga gcgtgtcggg gtggtgcccc aacggctgct gcccatacca ccggtccaca 1501 gcagacgggg cagcggcggc tatcgcggcc tacccgtcgg acagccgtgg gtccagcagg 1561 acaatgattt gaatcgaatc cctgctgtcc ccgtggcgca cggccacaac caaatccgtt 1621 ttgtggagcc acggaacatc gaatctgtgg aggacatcca ggcttggcag ccgccgccgc 1681 aatacgaaga gtatatttta gctgcccagc atccaggcgg cagtcggcaa gaaatggctc 1741 ctcgtagctt cgccaccgaa tcaagcatgc agcactcggg caggcactat gttcaaccgg 1801 aggttcatcc acgcatcttg cacagcgtcg agcacaggga gctccccgaa ggatccaggg 1861 ttttgaccat gcaccaagcc atgagcggag cggtttcccc gcagtatggc atcgtgggcg 1921 accaccagcc caccgcatac ggcgagttga gagcccacac tggcatggcc gtggtaagtg 1981 caatgtccag cggagcggag gccatcggct ctgaagcagc tggctgcaac ataccaaaac 2041 gcgtgcgcca ggtgcatatc gagcgggagc cacccattgg cggcgaggca tccacaacac 2101 aaggacagag gcatagtagc tcgggcatct taatgatgcc tacactcagc agccgcttgg 2161 cccccaggca gcgtaggaga acatccagca tgccggccga gtgccgcagg ccacaacatg 2221 cggagatgcg tcaggcggtg aaacatgccg aagaagatca gggcatcgag tattaccggc 2281 tgcgcagttt tagcattacc tcgaatgggg tatgcaattt gggggactcc ctgcgaagcc 2341 gcaggtcacg ctcaaacaac tcagtgacat cggggggtac ctcttcttac agcggcattc 2401 gaaacaacaa tagagacgca tggggtaata tcatcgatgc acaacaaaca ccatccggag 2461 agccgcccac cttcaagatt gcaatgctcg gcagtccttc ggtgggaaag tcagcactat 2521 cgttccagtt cacgacatcg gactatatct gcgcctacga cctaagtctt gagatggaat 2581 atggacagaa gacggtgtct gtgctggtgg atgacgttga atcggacatt gaagttgtgg 2641 atcatcccgc atgcgagatg tcgacggagg ctttttgcgc tacatacaat atcgatctgt 2701 tcgtggtcgt ctactcggtg ttggacgttc gctcgttccg gaacgcggag cgcgtcttgc 2761 attatttgag ggacaacgac atgctgctca gccgcggtgc catattggtg gggaataagg 2821 cggacctgga acgccatcgc actgtgcccc aagagatcgg ccacaaagtg gccacggaga 2881 ttccctgcaa gttcatcgag acgtcggccg ggctgtgcca caatgttaat gagcttttgg 2941 tgggcgtggt ggcccaggtg aaactcaatc cccagcgcct gagcatgctc tctccggccg 3001 acctggagcg cgtgaatatg cagagcagca tccaaaacca cagacgcatg cacctggagc 3061 gccaactgag cttgtaccgc agcgaccacg ggctgggtcc cgaggccgat gttgactccc 3121 atcggccgcc aatcagtctg aaagacattc tgaatgtggg ggagagtgat cgggaggacg 3181 gcgacgaaag cgaggcccag cggcgacgtc gcttcctcac ccagtttgag ctcctggccg 3241 ccaatctccg caaccattcg gggcgacctt tacccatcag cccgtttagc aagcgacggt 3301 ccatcgcggg caatgccacc gcaacctcgg acaatatgtt cccgagacta cagcgccggg 3361 ccacggacga ttcgcatctg ggtggcggca tctcgactcg gtcggagtgc agaaaaccgc 3421 tgttccactt cagttgcaat ggcagggtga agaagatgac ggcacgcacc aaggggtttg 3481 tttcgtcgct gctgcgcttc aaggcctccc actggctaag tcggcgcacc tcctccagct 3541 gcaccgatct ctttgggatc taa