PREDICTED: Drosophila obscura leucine-rich repeat-containing
LOCUS XM_022354691 1837 bp mRNA linear INV 14-MAY-2021
protein 58 (LOC111066243), mRNA.
ACCESSION XM_022354691
VERSION XM_022354691.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022354691.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1837
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1837
/gene="LOC111066243"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 4 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111066243"
CDS 369..1484
/gene="LOC111066243"
/codon_start=1
/product="leucine-rich repeat-containing protein 58"
/protein_id="XP_022210383.1"
/db_xref="GeneID:111066243"
/translation="MEVYTSDSSDTDSRDQKTIDFGRMSLDSVTLEDHLTSPHKALLK
SSGDIETMLLNHNRLVSLPRVLQQFANLKVLDLSSNAITQLPDAICQLPLVTLIAKNN
LLTNCSLPKSLLAKQAAGGGYGHGHSTLKELNLSGNQLTHFPEQVTELRHLKYLYVGG
NKITGISKDIWKLQSLHVLSLGGNLISEVPDAVGSLSQLQALVLCDNLIENLPMSIAR
LKNLKSLLLHKNRLRHLPKDIVALKNLTELSLRDNPLVVRFVQDMALKPPTLLELAGR
IVKASGQRPGPYDIPRTLAEYLNSANCCVNPNCKGVFFDNRVEHIKFVDFCGKYRVPL
LQYLCSSKCIEHEEPARGSSASSSANSGFMMRKVLLG"
misc_feature 513..581
/gene="LOC111066243"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature <546..>1133
/gene="LOC111066243"
/note="Leucine-rich repeat (LRR) protein [Transcription];
Region: LRR; COG4886"
/db_xref="CDD:443914"
misc_feature 582..644
/gene="LOC111066243"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 648..755
/gene="LOC111066243"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 756..824
/gene="LOC111066243"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 825..893
/gene="LOC111066243"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 894..962
/gene="LOC111066243"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 963..1031
/gene="LOC111066243"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
misc_feature 1032..1100
/gene="LOC111066243"
/note="leucine-rich repeat [structural motif]; Region:
leucine-rich repeat"
/db_xref="CDD:275380"
ORIGIN
1 tcatttgggt tggggcgagc gagcgagcgt cacgttagct ctgggcacag ttacagacac
61 cgttccacac gttcacgttc acttgtcgcg acgagtttca gttggtttcg ctgtttcgtt
121 attcttgatt gtttttctta ttattttgtt gttttttgtt ttctgtgtgt gcttctgctc
181 tgtcccgtct ctgttggatc agatcagaac agatcaacat cgtcatcatc cgttgatctg
241 cgccgtagaa cagcatcgtc gatcagttcc aattgagatc cgtaaacaaa aagcaacgcg
301 atcgcgccga ctctttccaa gtgatccaaa cagaacgaac agaaggaggc ccaagcccaa
361 gcccagccat ggaggtgtac acgtcggaca gctcggacac ggactcgcgc gaccaaaaga
421 ccatcgattt tgggcgcatg agtctcgatt cggttacgct cgaggatcac ctgacatcgc
481 cgcacaaggc cctgctcaag tccagcggcg acattgagac gatgctgctc aaccacaacc
541 gactggtgag cctgccccgg gtcctgcagc agtttgccaa cctcaaggtg ctggatctca
601 gctccaatgc gatcacccag ctgccggatg ccatctgcca gctgccgctg gtcacattga
661 ttgccaagaa caatttgctg accaactgct cgctgcccaa gtcgctgctg gccaagcagg
721 cggccggcgg tggctacgga cacggacaca gcaccctcaa ggagctcaat ctgagcggca
781 accagttgac ccacttcccc gagcaggtca ccgagctgcg ccacctcaag tatctgtatg
841 tgggcggcaa caagataacg ggcatctcga aggacatttg gaagctgcaa agtctgcatg
901 tgctgtcgct gggcggcaac ctgatcagcg aggtgcccga tgctgtgggg tcactcagcc
961 agctgcaggc gctggtcctg tgcgacaatc tcatcgagaa tctgccgatg agcattgccc
1021 ggctgaagaa cctcaagtcg ctgctgctgc acaagaatcg tctgcgccac ttgcccaagg
1081 acattgtggc cctgaagaac ctaacggagt tgagcctgcg cgacaatccg ctggtggtgc
1141 gcttcgtgca ggacatggca ttgaagcccc caacattgct ggagctggct ggccgcattg
1201 tgaaggctag tggccagcgg cccggaccct acgacatacc gcgtaccctg gccgagtatc
1261 tgaacagtgc caactgctgc gtgaacccca actgcaaggg cgtcttcttt gacaatcgcg
1321 tggagcacat caagttcgtg gacttttgcg gcaagtaccg cgtcccgctg ctgcagtatc
1381 tatgcagctc gaagtgcatc gagcatgagg aaccggcgcg cggctccagt gcgagcagca
1441 gcgccaatag cgggttcatg atgcgcaagg tgctcctggg ctaggccgtg cggccccggc
1501 ctggccctgg ccctggctgg cagcaggagt gccatcggag cgtcgtcggt ggctggcatc
1561 gaccggatat cgatatcgga gacggagatc cattcgttgt aaggccgcgg ggccccatgg
1621 caccagcgcc gcgccatcgg ctctggagtt tggcggccgc cgggcccggc ccgtcccacc
1681 ggctcgccgg cacatcccat tggctttatc acgttatcaa gtcaaatttg atctaatttg
1741 ctatatgatt atcgagtcgt tcgctttgtt gttgtttgtt gtttgttgtt tgcttgttgt
1801 tataaagccc gccttcccac acccccccaa agatacc