PREDICTED: Drosophila obscura histone acetyltransferase Tip60
LOCUS XM_022354682 1969 bp mRNA linear INV 14-MAY-2021
(LOC111066234), mRNA.
ACCESSION XM_022354682
VERSION XM_022354682.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022354682.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1969
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1969
/gene="LOC111066234"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 1 Protein, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111066234"
CDS 88..1761
/gene="LOC111066234"
/codon_start=1
/product="histone acetyltransferase Tip60"
/protein_id="XP_022210374.2"
/db_xref="GeneID:111066234"
/translation="MKINNKYEFDDDVASICESTAALTEGCRLPVRMHKTDDWPLAEI
VSIKELDGRRQFYVHYVDFNKRLDEWVNEEDLYTRKVQFPRRDGSQTGTSTGVTTPQR
HHSLAGSVSRPTSPQHPGIGISSAGAAGSGSVSAGAGAGGVGVTVGGSVTGSGVAPVG
GVVSGAVLPTGGTVGGGELVNGNNVLAAALQKRLNRRRRVHGNTHGHHMPSQQPPPHT
QTPNAQVATPVHVTGDGLIPTAPIEDGDGSQDGKIPTPRQSGSMVTHQDDVVTRMKNV
EMIELGRHRIKPWYFSPYPQELCQMPCIYICEFCLKYCKSRKCLERHLSKCNLRHPPG
NEIYRKQTISFFEIDGRKNKMYAQNLCLLAKLFLDHKTLYYDTDPFLFYIMTEFDSRG
FHIVGYFSKEKESTEDYNVACILTMPPYQRKGYGKLLIEFSYELSKFEGKTGSPEKPL
SDLGLLSYRSYWAQTILEIFISQNPSTEGEKPTITINDICECTSIKKEDVISTLQNLN
LINYYKGQYIVCINRDTIEQHHRAMEKRKIRIDSKCLHWTPKDWSKRSK"
misc_feature 166..357
/gene="LOC111066234"
/note="chromo barrel domain of human tat-interactive
protein 60, and similar proteins; Region: CBD_TIP60_like;
cd18985"
/db_xref="CDD:350848"
misc_feature order(202..207,211..216,259..261,265..276,286..288,
292..303,307..312,331..333,340..345)
/gene="LOC111066234"
/note="putative peptide binding site [polypeptide
binding]; other site"
/db_xref="CDD:350848"
misc_feature order(205..207,265..267,274..276,286..288)
/gene="LOC111066234"
/note="putative methylated histone tail binding site
[chemical binding]; other site"
/db_xref="CDD:350848"
misc_feature order(256..258,262..279,283..297)
/gene="LOC111066234"
/note="putative DNA binding site [nucleotide binding];
other site"
/db_xref="CDD:350848"
misc_feature order(256..258,265..267,277..279,283..285,295..297)
/gene="LOC111066234"
/note="putative RNA binding site [nucleotide binding];
other site"
/db_xref="CDD:350848"
misc_feature <898..1734
/gene="LOC111066234"
/note="MYST -like histone acetyltransferase; Provisional;
Region: PLN00104"
/db_xref="CDD:215056"
ORIGIN
1 attcattggc aaccctactt ttagcatatt tgcatatttc ttgaattaaa accaaataca
61 acgagtgtat agtaataaca gaggcaaatg aaaattaaca acaaatacga gttcgacgac
121 gacgtcgcat cgatatgcga atcgacggct gctttgaccg agggctgccg cctgccggtg
181 cgtatgcaca agacggacga ctggcccctg gcagagatcg ttagcatcaa ggagctggac
241 gggcgacgtc agttttatgt ccactatgtt gacttcaaca agcgcctgga cgaatgggtc
301 aacgaggagg acctgtacac cagaaaggtg cagtttccgc gtcgcgatgg ctcccagaca
361 ggcaccagca cgggcgtaac aactccgcag cgccatcact ctcttgccgg gagtgtgtcg
421 cgtcccacat cgccccagca cccgggcatt ggaatcagct ccgcaggggc tgctggcagt
481 ggcagtgtca gtgccggtgc cggtgccggt ggcgtcggcg ttaccgttgg cggcagtgtc
541 acgggcagtg gagtagcacc cgttggaggc gtggtcagcg gtgccgtttt gcccacaggt
601 ggcaccgtag gcggtggaga gctggtcaac ggcaacaatg ttctggctgc tgctctgcag
661 aagcgcttga atcgcaggcg cagggtgcac ggcaacaccc atggacacca catgccgtcc
721 caacagccgc cgccgcatac acagacgcca aacgctcagg tggccacacc ggtgcatgtg
781 acaggtgatg gtctgattcc cacagcaccc attgaagatg gcgatgggtc gcaggatggc
841 aagattccca cgcccagaca gtcgggcagc atggtcacac accaggacga tgtggtcacg
901 cgcatgaaga acgtggaaat gattgagctg gggcgtcacc gcatcaaacc gtggtacttc
961 tcgccctatc cccaggagct ctgccagatg ccctgcatct acatctgtga gttctgcctc
1021 aagtattgca agagtcgcaa gtgcctggag cgtcatctct ccaaatgcaa tctgcggcat
1081 ccgccgggca acgagatcta ccgcaagcag accatctcct tcttcgaaat cgatggacgc
1141 aaaaacaaga tgtacgcaca gaatctctgc ttgctggcca agctgttctt ggaccacaag
1201 acgctctact acgacacaga tccatttctg ttctacatca tgactgaatt cgattcgcgc
1261 ggcttccata ttgtcggcta tttctccaag gaaaaggaga gcaccgagga ctacaacgtg
1321 gcctgcatat tgacaatgcc gccgtatcag cgcaaaggct atggcaagct gctcatcgag
1381 ttcagctacg agctgtccaa gttcgaaggc aaaacaggct cgcccgagaa gccactgtcc
1441 gatctgggac tgctctcata tcgctcatat tgggcgcaga caatactgga gatattcatt
1501 agtcagaatc ccagcactga aggcgaaaag ccaaccataa caatcaacga catttgcgag
1561 tgcacttcga tcaagaagga ggacgtgatc tcaacattgc aaaaccttaa tctcatcaac
1621 tactataagg ggcagtatat tgtctgcata aatcgtgaca ccatcgagca gcatcatcgc
1681 gccatggaga agcgtaaaat tcgcatcgat tccaagtgcc tgcactggac ccccaaggat
1741 tggtccaaac gctccaaatg atggccgcct gctattgcta ttaacccagc cacagcgtgg
1801 tcgcttgagc cggctagccg ccgcaggact gacctggcca gtgccggctt gccccgagcc
1861 ccgcaagaga ctaactggaa gccttgtagt tcgtagatta tagcttaaat ctgttgcgct
1921 tttattaatg tacaaagaat ccatgtattc caaatatatt tacgacgaa