PREDICTED: Drosophila obscura vacuolar protein sorting-associated
LOCUS XM_022354679 1429 bp mRNA linear INV 14-MAY-2021
protein 37C (LOC111066232), mRNA.
ACCESSION XM_022354679
VERSION XM_022354679.2
DBLINK BioProject: PRJNA728747
KEYWORDS RefSeq.
SOURCE Drosophila obscura
ORGANISM Drosophila obscura
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_024542752.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 14, 2021 this sequence version replaced XM_022354679.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Drosophila obscura Annotation
Release 101
Annotation Version :: 101
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1429
/organism="Drosophila obscura"
/mol_type="mRNA"
/isolate="BZ-5 IFL"
/db_xref="taxon:7282"
/chromosome="Unknown"
/sex="male"
/tissue_type="whole fly"
/dev_stage="Adult fly"
/geo_loc_name="Serbia: Babin Zub"
/collection_date="2017"
gene 1..1429
/gene="LOC111066232"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 8 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 17 samples with support for all annotated
introns"
/db_xref="GeneID:111066232"
CDS 276..887
/gene="LOC111066232"
/codon_start=1
/product="vacuolar protein sorting-associated protein 37C"
/protein_id="XP_022210371.2"
/db_xref="GeneID:111066232"
/translation="MPTTRNSSKQAVSPQAQLQDNRRIAAGGGLVPEEEEGNMPNLST
LSLDELKQLDRDPEFFDDFIEEMSVVQHLNEELDSMMNQVENISRENESKGSHLVDLK
RRLSDDYTALKTLGEKCDELNKKYLKKSEEYAPQHIRELLQIAASNSDADCDRHVEHF
LNGKIDVQTFLNTYQSSKKISSERKAKEERLGTQLSALERAGI"
misc_feature 408..839
/gene="LOC111066232"
/note="Modifier of rudimentary (Mod(r)) protein; Region:
Mod_r; pfam07200"
/db_xref="CDD:462117"
ORIGIN
1 acggtgcgaa tgttgttttt gttataaaag ataatgttat tcagacctga acaaacaaag
61 caaacactcg atttatgcgc tttgggttct agaaagtcaa acactctgct gaaaaccgaa
121 cgcatcgccg caacccaaac acaaggactc aaacgccatt tggccctcga cgccaccaac
181 taactcaaag gagacttagc gcgtgggtat caaatgctag aaaccgattg gaatattgtc
241 cacttcaaga gctaggagca acgggtcact tcggtatgcc caccacacgc aattcgtcga
301 agcaggcggt gtcgccgcag gcacagctgc aggataacag gcgcattgct gctggtggcg
361 gactggtgcc agaggaggag gagggcaata tgccgaacct atccacactg tcgctggacg
421 agctgaagca gctggacagg gatccggagt tcttcgacga tttcatcgag gagatgtctg
481 tggtgcagca tctaaacgag gagctggact cgatgatgaa tcaagtggag aatatctcac
541 gtgaaaatga gagcaagggc agccatctgg tggatctgaa acgccgcctc agcgatgact
601 acactgccct gaaaacgctg ggcgagaagt gcgacgaact aaacaagaag tacttgaaga
661 agtcggagga atatgccccc cagcacatac gggaattact gcaaattgct gcctcgaatt
721 ccgacgccga ttgcgatcgt catgtggagc actttctcaa tggcaagatc gatgtgcaga
781 ccttcctcaa cacctatcag agctccaaga agatcagttc ggagcgcaag gccaaggaag
841 agcgattggg gacacagctg agcgccctgg agcgtgccgg aatttagcag ccctaaatga
901 ttgatgatga taatgattga tgcctacaat aacgatgatg acacgccaat cacccgtctc
961 caaaatgtac tgtactaaat gttatctcgc acccaactcc aaccaatgga ggggttccac
1021 aagtcgcaat ttataggatc taagcaaggc aacccctcac agaatactgg agatcaaaat
1081 cagagccgaa gattattcgc tcgctagtga aacgtataat aatctagttg tagattttat
1141 acacacatat atatgtactt gtaaatcgtt agggcccaat caaaatgtat ggctttatat
1201 ttataattgt aattgtaatt ttagaaacag aacgcccatg tgttatgagt gtccgcagtt
1261 aaactcaagc tcaagccaac cccaaaccaa aaagccccaa tcgaaatgaa atcgcatgta
1321 ttcccctagg ttacgtctgg tcgcctatcc tgccaacagt tctagttctg tttatctgta
1381 ctaccccaat gtatgtatat ttaataaaag tttatgattt atctgaaaa