Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_022354676 3296 bp mRNA linear INV 14-MAY-2021 (LOC111066230), transcript variant X7, mRNA. ACCESSION XM_022354676 VERSION XM_022354676.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022354676.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3296 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..3296 /gene="LOC111066230" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns" /db_xref="GeneID:111066230" CDS 305..3160 /gene="LOC111066230" /codon_start=1 /product="amyloid-beta-like protein isoform X7" /protein_id="XP_022210368.2" /db_xref="GeneID:111066230" /translation="MCAALRQRNLWLRSLWAIAVAILATGTVQGASPRWEPQIAVLCE AGQIYQPQYLSEEGRWVTDLSKKTTGATCLRDKMDLLDYCKKAYPNRDITNIVESSHY QKIGGWCRQGALNAAKCKGSHRWIKPFRCLGPFQSDALLVPEGCLFDHIHNASRCWPF VRWNQTGAAACQERGMQMRSFAMLLPCGISLFSGVEFVCCPKHFKTDEIHVKKTDLPV MPPAQISSANDELNDNEEDDSNESNYSKDANDDELDDEDDLMADDEEDEMVADEAAAA GGTGSSSGSAGDASSGSLDDINAEYDSGEDGDNYEEDGAGSEGDNDSDTWDQNGSSSG AKPVGLKVPILSMASSSPSSLPVGPDGSSGKAPLKPDQVTRIPIYSPAQAAAREAAIS NANRINRLAAAAAAAAAAAAAAAATGSGAAAGAGAGTGAGAPPPSTAQPTSDPYFTHF DPHYEHQSYKVSQKRLEESHREKVTRVMKDWSDLEEKYQDMRLADPKAAQSFKQRMTA RFQTSVQALEEEGNAEKHQLAAMHQQRVLAHINQRKREAMTCYTQALTEQPPNAHHVE KCLQKLLRALHKDRAHALAHYRHLLNSGGPGGLEAAASERPRTLERLIDIDRAVNQSM TMLKRYPELSAKIAQLMNDYILALRSKDDIPGSSLGMSEEAEAGILDKYRIEIERKVA EKERLRLAEKQRKEQRAAEREKLREEKLRMEAKKVDDMLKSQAAEQQSQSPSQSSSQS QPPAQSQAQQQQQQQQQQQQQSQQQDKSINSKELGIDGGLVTAANLNLDTTKSEKDLA DAEYAEATVSTKVQTVLPTVDDDAVQRAVEDVAAAVAHQEAEPQVQHFMTHDLGHRES SFSLRREFAHAHAAKEGRNVYFTLSFAGIALMAAVFVGVAVAKWRTSRSPHAQGFIEV DQNVTTHHPIVQEDKIVPNMQINGYENPTYKYFEVKE" misc_feature 389..907 /gene="LOC111066230" /note="amyloid A4; Region: A4_EXTRA; smart00006" /db_xref="CDD:128326" misc_feature 1604..2185 /gene="LOC111066230" /note="E2 domain of amyloid precursor protein; Region: APP_E2; pfam12925" /db_xref="CDD:463752" misc_feature 2339..>2485 /gene="LOC111066230" /note="DDRGK domain; Region: DDRGK; pfam09756" /db_xref="CDD:370664" misc_feature 2999..3148 /gene="LOC111066230" /note="Beta-amyloid precursor protein C-terminus; Region: APP_amyloid; pfam10515" /db_xref="CDD:463129" ORIGIN 1 gagccactgg gcgcccactg aaggcaacga gttgctcatg tggtcggtgc cactcgcagt 61 cgtttgtgag cgttcgcagc gcaagttgca gcaatactta gtgttaaaca aataagccac 121 caaagcaaat actcgtacaa ttaagcccga gcagcccgag acacccgtcc agagacagag 181 acagccggat tcccttggag aaggagctgt tcgtggagag cagagacaga gacaaagaca 241 aagacaaaag acaagcggag aagcggagaa cagttcagcc aaaggccgaa aaagagtgcg 301 aacaatgtgc gccgcgctgc gtcaacgcaa tttgtggctg cggagcctct gggccatcgc 361 cgtagccatc ctggccactg gcactgtaca gggcgcctcg ccacgctggg agccgcaaat 421 agccgtactc tgcgaagccg gacaaatcta tcagccgcaa tatctgtccg aggagggacg 481 ctgggtgacg gacctcagca agaagacaac tggcgccaca tgtttgcgtg ataaaatgga 541 tttgcttgat tactgcaaga aggcctatcc caatcgagac attaccaaca ttgtggagtc 601 gtcgcactac cagaagatcg gcggctggtg ccgccagggt gctctgaacg cggccaagtg 661 caagggatcc caccgctgga ttaagccgtt ccgttgtctg ggaccattcc aatcggacgc 721 cttgctggtg ccagagggct gcctcttcga tcacatccac aatgcgtccc gctgctggcc 781 attcgtcaga tggaaccaga cgggcgccgc cgcctgccag gaacggggca tgcagatgcg 841 cagcttcgcc atgctgctgc cctgcggcat atcgctcttc tccggcgtgg aattcgtgtg 901 ctgccccaag cacttcaaga ccgatgagat tcatgtgaag aagaccgatc tgccggtgat 961 gcccccggca cagatcagca gtgccaacga tgagctgaac gacaacgagg aggatgacag 1021 caacgagtcc aactactcga aggacgccaa cgatgatgag ctggacgacg aggatgatct 1081 gatggccgac gacgaggagg acgaaatggt ggccgacgag gcggctgcgg ctggcggcac 1141 tgggtccagc tctggctcgg ctggcgatgc cagcagcggc tccctggatg acattaatgc 1201 ggaatatgat agcggcgagg atggcgacaa ctacgaggag gatggcgctg gctccgaggg 1261 cgacaatgac tccgatacct gggaccagaa cggcagctcc agtggcgcca agcccgtggg 1321 cctcaaggta cccattttgt cgatggcctc ctcgtccccg tccagcctgc ccgtgggtcc 1381 cgatggcagc tccggcaagg cacccctgaa gcccgaccag gttacacgca ttcccattta 1441 ctcgccggcc caggctgccg ccagagaggc tgccatcagt aatgccaatc gtatcaatcg 1501 acttgctgcc gcagctgccg ctgctgctgc cgccgctgct gctgctgccg ctactgggtc 1561 tggagctgca gctggagctg gggctgggac tggagctggg gcaccaccac cgtcgacggc 1621 acagcccacc tctgatccgt acttcaccca ctttgatccg cactacgagc accagagcta 1681 caaagtaagt cagaaacgcc ttgaggaatc gcatcgcgag aaggtcaccc gtgtgatgaa 1741 ggactggtcc gatctggagg agaagtacca ggacatgcgg ctggccgatc ccaaggctgc 1801 ccaatcattt aagcagcgca tgaccgcccg cttccagact tctgttcagg cactcgagga 1861 agaaggcaac gccgagaagc accagctggc cgccatgcac cagcaacgcg tgctcgccca 1921 catcaaccag aggaagcgcg aggccatgac ctgctacacc caggccctta ccgagcagcc 1981 acccaatgcc catcatgtgg agaagtgtct gcagaagctg ctgcgggccc tgcacaagga 2041 ccgagcccat gccctggcac actaccgaca cctgttgaac tccggcggac cgggcggcct 2101 ggaggcggct gcctcagagc gaccccgcac cctggagcgt ctgatcgaca tcgatcgggc 2161 tgtcaaccag tcgatgacca tgctaaagcg ctacccagag ctgtccgcca aaattgccca 2221 gctgatgaac gactacattc tggcactgcg cagcaaggac gacattcccg gctcgtcgct 2281 cggcatgagc gaggaggcag aggcgggcat cctggacaag taccgcatcg agatcgagcg 2341 caaggtggcc gagaaggagc gattgcgtct ggccgagaag cagcgtaagg agcagcgtgc 2401 cgccgagcgt gagaagctgc gcgaggaaaa gctacgcatg gaggccaaga aggttgacga 2461 catgctcaag tcgcaggcgg ccgagcagca gtcccaatcc ccatcccagt cctcctccca 2521 gtcccagccc ccagctcagt cgcaggcaca gcagcaacag caacagcaac agcagcagca 2581 acagcagtcg cagcaacaag acaagagtat taacagcaag gagctgggca tcgacggggg 2641 cctagtaacc gctgccaacc tgaatctcga caccaccaag agcgagaagg acctggccga 2701 tgccgagtac gctgaggcca ctgtcagcac caaggtgcag actgtgttgc caacggttga 2761 cgatgatgcc gttcaacggg cggtggagga tgtggctgct gccgtggccc accaagaggc 2821 cgagccgcag gtgcagcact tcatgaccca cgatctgggc caccgcgaat cgagcttctc 2881 gctgcgccgc gaatttgcgc acgcgcacgc ggccaaggag ggacgcaacg tctacttcac 2941 tctctccttt gccggcatcg ccctcatggc ggctgtcttt gtgggtgtgg ccgttgccaa 3001 gtggcgaaca tcgcgctcgc cgcacgccca gggcttcatt gaggtggatc agaacgtgac 3061 cacacaccat cccatcgtac aggaggacaa gatcgtgccc aatatgcaga tcaatgggta 3121 cgagaatccg acctacaagt actttgaggt gaaagagtaa gcgtcccagc ggcagcggta 3181 gagcaagcga gcaggcgaga gcacggcaca tcaacagcaa aaaacgcaaa aagcagcagc 3241 agcaaaaaaa acaacaacaa caatttcaaa atggaaaaaa acttaaacat aatatt