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LOCUS XM_022354675 3287 bp mRNA linear INV 14-MAY-2021 (LOC111066230), transcript variant X6, mRNA. ACCESSION XM_022354675 VERSION XM_022354675.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022354675.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3287 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..3287 /gene="LOC111066230" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns" /db_xref="GeneID:111066230" CDS 305..3151 /gene="LOC111066230" /codon_start=1 /product="amyloid-beta-like protein isoform X6" /protein_id="XP_022210367.2" /db_xref="GeneID:111066230" /translation="MCAALRQRNLWLRSLWAIAVAILATGTVQGASPRWEPQIAVLCE AGQIYQPQYLSEEGRWVTDLSKKTTGATCLRDKMDLLDYCKKAYPNRDITNIVESSHY QKIGGWCRQGALNAAKCKGSHRWIKPFRCLEGPFQSDALLVPEGCLFDHIHNASRCWP FVRWNQTGAAACQERGMQMRSFAMLLPCGISLFSGVEFVCCPKHFKTDEIHVKKTDLP VMPPAQISSANDELNDNEEDDSNESNYSKDANDDELDDEDDLMADDEEDEMVADEAAA AGGTGSSSGSAGDASSGSLDDINAEYDSGEDGDNYEEDGAGSEGDNDSDTWDQNGSSS GAKPVGLKVPILSMASSSPSSLPVGPDGSSGKAPLKPDQVTRIPIYSPAQAAAREAAI SNANRINRLAAAAAAAAAAAAAAAATGSGAAAGAGAGTGAGAPPPSTAQPTSDPYFTH FDPHYEHQSYKRLEESHREKVTRVMKDWSDLEEKYQDMRLADPKAAQSFKQRMTARFQ TSVQALEEEGNAEKHQLAAMHQQRVLAHINQRKREAMTCYTQALTEQPPNAHHVEKCL QKLLRALHKDRAHALAHYRHLLNSGGPGGLEAAASERPRTLERLIDIDRAVNQSMTML KRYPELSAKIAQLMNDYILALRSKDDIPGSSLGMSEEAEAGILDKYRIEIERKVAEKE RLRLAEKQRKEQRAAEREKLREEKLRMEAKKVDDMLKSQAAEQQSQSPSQSSSQSQPP AQSQAQQQQQQQQQQQQQSQQQDKSINSKELGIDGGLVTAANLNLDTTKSEKDLADAE YAEATVSTKVQTVLPTVDDDAVQRAVEDVAAAVAHQEAEPQVQHFMTHDLGHRESSFS LRREFAHAHAAKEGRNVYFTLSFAGIALMAAVFVGVAVAKWRTSRSPHAQGFIEVDQN VTTHHPIVQEDKIVPNMQINGYENPTYKYFEVKE" misc_feature 389..910 /gene="LOC111066230" /note="amyloid A4; Region: A4_EXTRA; smart00006" /db_xref="CDD:128326" misc_feature 1607..2176 /gene="LOC111066230" /note="E2 domain of amyloid precursor protein; Region: APP_E2; pfam12925" /db_xref="CDD:463752" misc_feature 2330..>2476 /gene="LOC111066230" /note="DDRGK domain; Region: DDRGK; pfam09756" /db_xref="CDD:370664" misc_feature 2990..3139 /gene="LOC111066230" /note="Beta-amyloid precursor protein C-terminus; Region: APP_amyloid; pfam10515" /db_xref="CDD:463129" ORIGIN 1 gagccactgg gcgcccactg aaggcaacga gttgctcatg tggtcggtgc cactcgcagt 61 cgtttgtgag cgttcgcagc gcaagttgca gcaatactta gtgttaaaca aataagccac 121 caaagcaaat actcgtacaa ttaagcccga gcagcccgag acacccgtcc agagacagag 181 acagccggat tcccttggag aaggagctgt tcgtggagag cagagacaga gacaaagaca 241 aagacaaaag acaagcggag aagcggagaa cagttcagcc aaaggccgaa aaagagtgcg 301 aacaatgtgc gccgcgctgc gtcaacgcaa tttgtggctg cggagcctct gggccatcgc 361 cgtagccatc ctggccactg gcactgtaca gggcgcctcg ccacgctggg agccgcaaat 421 agccgtactc tgcgaagccg gacaaatcta tcagccgcaa tatctgtccg aggagggacg 481 ctgggtgacg gacctcagca agaagacaac tggcgccaca tgtttgcgtg ataaaatgga 541 tttgcttgat tactgcaaga aggcctatcc caatcgagac attaccaaca ttgtggagtc 601 gtcgcactac cagaagatcg gcggctggtg ccgccagggt gctctgaacg cggccaagtg 661 caagggatcc caccgctgga ttaagccgtt ccgttgtctg gaaggaccat tccaatcgga 721 cgccttgctg gtgccagagg gctgcctctt cgatcacatc cacaatgcgt cccgctgctg 781 gccattcgtc agatggaacc agacgggcgc cgccgcctgc caggaacggg gcatgcagat 841 gcgcagcttc gccatgctgc tgccctgcgg catatcgctc ttctccggcg tggaattcgt 901 gtgctgcccc aagcacttca agaccgatga gattcatgtg aagaagaccg atctgccggt 961 gatgcccccg gcacagatca gcagtgccaa cgatgagctg aacgacaacg aggaggatga 1021 cagcaacgag tccaactact cgaaggacgc caacgatgat gagctggacg acgaggatga 1081 tctgatggcc gacgacgagg aggacgaaat ggtggccgac gaggcggctg cggctggcgg 1141 cactgggtcc agctctggct cggctggcga tgccagcagc ggctccctgg atgacattaa 1201 tgcggaatat gatagcggcg aggatggcga caactacgag gaggatggcg ctggctccga 1261 gggcgacaat gactccgata cctgggacca gaacggcagc tccagtggcg ccaagcccgt 1321 gggcctcaag gtacccattt tgtcgatggc ctcctcgtcc ccgtccagcc tgcccgtggg 1381 tcccgatggc agctccggca aggcacccct gaagcccgac caggttacac gcattcccat 1441 ttactcgccg gcccaggctg ccgccagaga ggctgccatc agtaatgcca atcgtatcaa 1501 tcgacttgct gccgcagctg ccgctgctgc tgccgccgct gctgctgctg ccgctactgg 1561 gtctggagct gcagctggag ctggggctgg gactggagct ggggcaccac caccgtcgac 1621 ggcacagccc acctctgatc cgtacttcac ccactttgat ccgcactacg agcaccagag 1681 ctacaaacgc cttgaggaat cgcatcgcga gaaggtcacc cgtgtgatga aggactggtc 1741 cgatctggag gagaagtacc aggacatgcg gctggccgat cccaaggctg cccaatcatt 1801 taagcagcgc atgaccgccc gcttccagac ttctgttcag gcactcgagg aagaaggcaa 1861 cgccgagaag caccagctgg ccgccatgca ccagcaacgc gtgctcgccc acatcaacca 1921 gaggaagcgc gaggccatga cctgctacac ccaggccctt accgagcagc cacccaatgc 1981 ccatcatgtg gagaagtgtc tgcagaagct gctgcgggcc ctgcacaagg accgagccca 2041 tgccctggca cactaccgac acctgttgaa ctccggcgga ccgggcggcc tggaggcggc 2101 tgcctcagag cgaccccgca ccctggagcg tctgatcgac atcgatcggg ctgtcaacca 2161 gtcgatgacc atgctaaagc gctacccaga gctgtccgcc aaaattgccc agctgatgaa 2221 cgactacatt ctggcactgc gcagcaagga cgacattccc ggctcgtcgc tcggcatgag 2281 cgaggaggca gaggcgggca tcctggacaa gtaccgcatc gagatcgagc gcaaggtggc 2341 cgagaaggag cgattgcgtc tggccgagaa gcagcgtaag gagcagcgtg ccgccgagcg 2401 tgagaagctg cgcgaggaaa agctacgcat ggaggccaag aaggttgacg acatgctcaa 2461 gtcgcaggcg gccgagcagc agtcccaatc cccatcccag tcctcctccc agtcccagcc 2521 cccagctcag tcgcaggcac agcagcaaca gcaacagcaa cagcagcagc aacagcagtc 2581 gcagcaacaa gacaagagta ttaacagcaa ggagctgggc atcgacgggg gcctagtaac 2641 cgctgccaac ctgaatctcg acaccaccaa gagcgagaag gacctggccg atgccgagta 2701 cgctgaggcc actgtcagca ccaaggtgca gactgtgttg ccaacggttg acgatgatgc 2761 cgttcaacgg gcggtggagg atgtggctgc tgccgtggcc caccaagagg ccgagccgca 2821 ggtgcagcac ttcatgaccc acgatctggg ccaccgcgaa tcgagcttct cgctgcgccg 2881 cgaatttgcg cacgcgcacg cggccaagga gggacgcaac gtctacttca ctctctcctt 2941 tgccggcatc gccctcatgg cggctgtctt tgtgggtgtg gccgttgcca agtggcgaac 3001 atcgcgctcg ccgcacgccc agggcttcat tgaggtggat cagaacgtga ccacacacca 3061 tcccatcgta caggaggaca agatcgtgcc caatatgcag atcaatgggt acgagaatcc 3121 gacctacaag tactttgagg tgaaagagta agcgtcccag cggcagcggt agagcaagcg 3181 agcaggcgag agcacggcac atcaacagca aaaaacgcaa aaagcagcag cagcaaaaaa 3241 aacaacaaca acaatttcaa aatggaaaaa aacttaaaca taatatt