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LOCUS XM_022354669 3311 bp mRNA linear INV 14-MAY-2021 (LOC111066230), transcript variant X1, mRNA. ACCESSION XM_022354669 VERSION XM_022354669.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022354669.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3311 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..3311 /gene="LOC111066230" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns" /db_xref="GeneID:111066230" CDS 305..3175 /gene="LOC111066230" /codon_start=1 /product="amyloid-beta-like protein isoform X1" /protein_id="XP_022210361.2" /db_xref="GeneID:111066230" /translation="MCAALRQRNLWLRSLWAIAVAILATGTVQGASPRWEPQIAVLCE AGQIYQPQYLSEEGRWVTDLSKKTTGATCLRDKMDLLDYCKKAYPNRDITNIVESSHY QKIGGWCRQGALNAAKCKGSHRWIKPFRCLEGPFQSDALLVPEGCLFDHIHNASRCWP FVRWNQTGAAACQERGMQMRSFAMLLPCGISLFSGVEFVCCPKHFKTDEIHVKKTDLP VMPPAQISSANDELNDNEEDDSNESNYSKDANDDELDDEDDLMADDEEDEMVADEAAA AGGTGSSSGSAGDASSGSLDDINAEYDSGEDGDNYEEDGAGSEGDNDSDTWDQNGSSS GAKPVGLKVPILSMASSSPSSLPVGPDGSSGKAPLKPDQVTRIPIYSPAQAAAREAAI SNANRINRLAAAAAAAAAAAAAAAATGSGAAAGAGAGTGAGAPPPSTAQPTSDPYFTH FDPHYEHQSYKVSQKEAQQRLEESHREKVTRVMKDWSDLEEKYQDMRLADPKAAQSFK QRMTARFQTSVQALEEEGNAEKHQLAAMHQQRVLAHINQRKREAMTCYTQALTEQPPN AHHVEKCLQKLLRALHKDRAHALAHYRHLLNSGGPGGLEAAASERPRTLERLIDIDRA VNQSMTMLKRYPELSAKIAQLMNDYILALRSKDDIPGSSLGMSEEAEAGILDKYRIEI ERKVAEKERLRLAEKQRKEQRAAEREKLREEKLRMEAKKVDDMLKSQAAEQQSQSPSQ SSSQSQPPAQSQAQQQQQQQQQQQQQSQQQDKSINSKELGIDGGLVTAANLNLDTTKS EKDLADAEYAEATVSTKVQTVLPTVDDDAVQRAVEDVAAAVAHQEAEPQVQHFMTHDL GHRESSFSLRREFAHAHAAKEGRNVYFTLSFAGIALMAAVFVGVAVAKWRTSRSPHAQ GFIEVDQNVTTHHPIVQEDKIVPNMQINGYENPTYKYFEVKE" misc_feature 389..910 /gene="LOC111066230" /note="amyloid A4; Region: A4_EXTRA; smart00006" /db_xref="CDD:128326" misc_feature 1607..2200 /gene="LOC111066230" /note="E2 domain of amyloid precursor protein; Region: APP_E2; pfam12925" /db_xref="CDD:463752" misc_feature 2354..>2500 /gene="LOC111066230" /note="DDRGK domain; Region: DDRGK; pfam09756" /db_xref="CDD:370664" misc_feature 3014..3163 /gene="LOC111066230" /note="Beta-amyloid precursor protein C-terminus; Region: APP_amyloid; pfam10515" /db_xref="CDD:463129" ORIGIN 1 gagccactgg gcgcccactg aaggcaacga gttgctcatg tggtcggtgc cactcgcagt 61 cgtttgtgag cgttcgcagc gcaagttgca gcaatactta gtgttaaaca aataagccac 121 caaagcaaat actcgtacaa ttaagcccga gcagcccgag acacccgtcc agagacagag 181 acagccggat tcccttggag aaggagctgt tcgtggagag cagagacaga gacaaagaca 241 aagacaaaag acaagcggag aagcggagaa cagttcagcc aaaggccgaa aaagagtgcg 301 aacaatgtgc gccgcgctgc gtcaacgcaa tttgtggctg cggagcctct gggccatcgc 361 cgtagccatc ctggccactg gcactgtaca gggcgcctcg ccacgctggg agccgcaaat 421 agccgtactc tgcgaagccg gacaaatcta tcagccgcaa tatctgtccg aggagggacg 481 ctgggtgacg gacctcagca agaagacaac tggcgccaca tgtttgcgtg ataaaatgga 541 tttgcttgat tactgcaaga aggcctatcc caatcgagac attaccaaca ttgtggagtc 601 gtcgcactac cagaagatcg gcggctggtg ccgccagggt gctctgaacg cggccaagtg 661 caagggatcc caccgctgga ttaagccgtt ccgttgtctg gaaggaccat tccaatcgga 721 cgccttgctg gtgccagagg gctgcctctt cgatcacatc cacaatgcgt cccgctgctg 781 gccattcgtc agatggaacc agacgggcgc cgccgcctgc caggaacggg gcatgcagat 841 gcgcagcttc gccatgctgc tgccctgcgg catatcgctc ttctccggcg tggaattcgt 901 gtgctgcccc aagcacttca agaccgatga gattcatgtg aagaagaccg atctgccggt 961 gatgcccccg gcacagatca gcagtgccaa cgatgagctg aacgacaacg aggaggatga 1021 cagcaacgag tccaactact cgaaggacgc caacgatgat gagctggacg acgaggatga 1081 tctgatggcc gacgacgagg aggacgaaat ggtggccgac gaggcggctg cggctggcgg 1141 cactgggtcc agctctggct cggctggcga tgccagcagc ggctccctgg atgacattaa 1201 tgcggaatat gatagcggcg aggatggcga caactacgag gaggatggcg ctggctccga 1261 gggcgacaat gactccgata cctgggacca gaacggcagc tccagtggcg ccaagcccgt 1321 gggcctcaag gtacccattt tgtcgatggc ctcctcgtcc ccgtccagcc tgcccgtggg 1381 tcccgatggc agctccggca aggcacccct gaagcccgac caggttacac gcattcccat 1441 ttactcgccg gcccaggctg ccgccagaga ggctgccatc agtaatgcca atcgtatcaa 1501 tcgacttgct gccgcagctg ccgctgctgc tgccgccgct gctgctgctg ccgctactgg 1561 gtctggagct gcagctggag ctggggctgg gactggagct ggggcaccac caccgtcgac 1621 ggcacagccc acctctgatc cgtacttcac ccactttgat ccgcactacg agcaccagag 1681 ctacaaagta agtcagaaag aagcccaaca gcgccttgag gaatcgcatc gcgagaaggt 1741 cacccgtgtg atgaaggact ggtccgatct ggaggagaag taccaggaca tgcggctggc 1801 cgatcccaag gctgcccaat catttaagca gcgcatgacc gcccgcttcc agacttctgt 1861 tcaggcactc gaggaagaag gcaacgccga gaagcaccag ctggccgcca tgcaccagca 1921 acgcgtgctc gcccacatca accagaggaa gcgcgaggcc atgacctgct acacccaggc 1981 ccttaccgag cagccaccca atgcccatca tgtggagaag tgtctgcaga agctgctgcg 2041 ggccctgcac aaggaccgag cccatgccct ggcacactac cgacacctgt tgaactccgg 2101 cggaccgggc ggcctggagg cggctgcctc agagcgaccc cgcaccctgg agcgtctgat 2161 cgacatcgat cgggctgtca accagtcgat gaccatgcta aagcgctacc cagagctgtc 2221 cgccaaaatt gcccagctga tgaacgacta cattctggca ctgcgcagca aggacgacat 2281 tcccggctcg tcgctcggca tgagcgagga ggcagaggcg ggcatcctgg acaagtaccg 2341 catcgagatc gagcgcaagg tggccgagaa ggagcgattg cgtctggccg agaagcagcg 2401 taaggagcag cgtgccgccg agcgtgagaa gctgcgcgag gaaaagctac gcatggaggc 2461 caagaaggtt gacgacatgc tcaagtcgca ggcggccgag cagcagtccc aatccccatc 2521 ccagtcctcc tcccagtccc agcccccagc tcagtcgcag gcacagcagc aacagcaaca 2581 gcaacagcag cagcaacagc agtcgcagca acaagacaag agtattaaca gcaaggagct 2641 gggcatcgac gggggcctag taaccgctgc caacctgaat ctcgacacca ccaagagcga 2701 gaaggacctg gccgatgccg agtacgctga ggccactgtc agcaccaagg tgcagactgt 2761 gttgccaacg gttgacgatg atgccgttca acgggcggtg gaggatgtgg ctgctgccgt 2821 ggcccaccaa gaggccgagc cgcaggtgca gcacttcatg acccacgatc tgggccaccg 2881 cgaatcgagc ttctcgctgc gccgcgaatt tgcgcacgcg cacgcggcca aggagggacg 2941 caacgtctac ttcactctct cctttgccgg catcgccctc atggcggctg tctttgtggg 3001 tgtggccgtt gccaagtggc gaacatcgcg ctcgccgcac gcccagggct tcattgaggt 3061 ggatcagaac gtgaccacac accatcccat cgtacaggag gacaagatcg tgcccaatat 3121 gcagatcaat gggtacgaga atccgaccta caagtacttt gaggtgaaag agtaagcgtc 3181 ccagcggcag cggtagagca agcgagcagg cgagagcacg gcacatcaac agcaaaaaac 3241 gcaaaaagca gcagcagcaa aaaaaacaac aacaacaatt tcaaaatgga aaaaaactta 3301 aacataatat t