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LOCUS XM_022354658 2096 bp mRNA linear INV 14-MAY-2021 protein-associated protein B/C (LOC111066223), transcript variant X2, mRNA. ACCESSION XM_022354658 VERSION XM_022354658.2 DBLINK BioProject: PRJNA728747 KEYWORDS RefSeq. SOURCE Drosophila obscura ORGANISM Drosophila obscura Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_024542752.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On May 14, 2021 this sequence version replaced XM_022354658.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Drosophila obscura Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.6 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2096 /organism="Drosophila obscura" /mol_type="mRNA" /isolate="BZ-5 IFL" /db_xref="taxon:7282" /chromosome="Unknown" /sex="male" /tissue_type="whole fly" /dev_stage="Adult fly" /geo_loc_name="Serbia: Babin Zub" /collection_date="2017" gene 1..2096 /gene="LOC111066223" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns" /db_xref="GeneID:111066223" CDS 543..1340 /gene="LOC111066223" /codon_start=1 /product="vesicle-associated membrane protein-associated protein B/C" /protein_id="XP_022210350.2" /db_xref="GeneID:111066223" /translation="MSKPNFELPLTIDPEHELRFVGPFNRSVVTIMTLRNNAAVPLVF KIKTTAPKRYCVRPNIGKILPFRSTQVEICLQPFMYDQQEKNKHKFMVQSVLAPMDAD LTDLNKLWKELEPQQLMDAKLKCVFEMPSAEANAENPSGGAVGGGTGSAGGGTAGTNV SSVIAEGIWADTKLSSDEKASNSPDATEHVDSSDELKALQESNSELRKENLHLKDQIT RYRSSAVLKQPNEPYAPVLAEKQIPVFYIAIAIAAAILGLLLGKFLL" misc_feature 567..887 /gene="LOC111066223" /note="MSP (Major sperm protein) domain; Region: Motile_Sperm; pfam00635" /db_xref="CDD:459882" ORIGIN 1 ttgacgggcg tttttctgct gactgaattt ttagcctctg catttgcata tgaaaatttt 61 actagattcg aagaaaagct aaactaacta agtgaaatag ccgagccaga atcaaagtga 121 catcaaatcg agtagaaaat tgcattgcac gaagcagggt tgatcatcgt tttttttttg 181 tacgcaacaa cacggaattt gtgtttggta tattctttat attctaaccg tgagcgagag 241 tgtgtgtgtg tgtggtcgca taaatttacc gatatttcgc ctggcctcgc tctctgacaa 301 atcggacgga gccagcagcg acaaacgagc aacgcgcagc ttatgaaaag tcgagaagag 361 aaaaaataaa acaatcggga aatctagtta aaaagccacc actacaacta caacgacaac 421 aaggtgaagg caaaaccagg acaagcagcg cgcaaaaacg cacaaaagaa ttaaggaaga 481 ataccgaaaa gcagacaaga agttgcaatt tttctacagt ggagtccata caaacagcag 541 ccatgagcaa accaaacttc gagcttccgc tgaccattga tccggagcat gagttgcgtt 601 ttgtgggtcc cttcaatcgg tccgtcgtca caataatgac ccttcggaat aatgcggcgg 661 tgccactggt cttcaagatc aagacaaccg caccaaagcg ctactgtgta cgtccaaaca 721 ttggcaagat tctgccattt cgctcgaccc aggtggaaat ctgcctgcag ccctttatgt 781 acgatcagca ggagaaaaac aagcacaagt tcatggtgca aagcgtcctc gcaccgatgg 841 atgctgatct gaccgatttg aataaattgt ggaaggagct ggagccgcag cagctaatgg 901 atgccaagct gaaatgcgta ttcgagatgc ccagtgccga ggcaaatgca gagaacccca 961 gcggcggagc cgtgggcggt ggaaccggca gcgccggcgg aggtactgcg ggtaccaatg 1021 tcagttccgt catcgccgag ggaatttggg cagacacgaa gctgtccagc gatgagaagg 1081 cctcaaattc gcccgatgcc actgagcatg tggactcgtc cgatgagtta aaggcgctgc 1141 aggagtccaa cagtgaacta cgaaaagaga atctacactt gaaggatcaa atcacacgct 1201 atcgcagctc agcggtcctc aagcagccga acgagcccta tgccccagtg ctggctgaga 1261 aacagattcc ggtcttttat attgcaattg caattgctgc ggccatactg ggtctcttac 1321 tgggcaaatt tttgctctga atgccataaa ttatccaaca tgcagcagaa tcactaacaa 1381 ctacagaact acagaaaaca aaaaacaaga aacaagaaag agaacagcat cagggagcag 1441 cagcaccatc aaaccgcaac aagacgcaat agcagcaata acaacgaacg aacgcagaag 1501 caacagaaaa aagcaaacga aagaggcggc gatactaaaa ccatcagaag gagcagtcga 1561 aaaggaaact agctctcgag gataaagaag aaggaggatg ataaaggagc tgcgctcgaa 1621 cagaaagtaa aggcttcgca gatgaagcag ttaaatctta aaatgattca aaaacaaaac 1681 cactgcaaaa agaaacaacc agtttaatcc aaaaagtgca ttgctcagat tttccattgc 1741 atttttttta tatttttttt gaactaatat tacaatattc tttacgataa ctattattat 1801 ttaacgtcta gagtcgtgga aactcgcatc tcttattttc tttctattat tcttcaatca 1861 gacatatttt taaaatctaa aacttatata ttaaaaaaaa caaacaaact ttcgacaaaa 1921 agcaaaaaca aacccaacat tcttaatgga tgcaaaccga tttcagtttt atttttaatt 1981 gagtttgtta tttgctttga caaaacttgg ataaatgtaa ttgttaaagc aaaaaactaa 2041 gaagaagcat aattaaggaa aaccacgagc aaaataaaat gcattacaaa aagtca