Candida albicans SC5314 ribosomal 60S subunit protein L23B

LOCUS       XM_019475462             414 bp    mRNA    linear   PLN 18-APR-2022
            (RPL23A), partial mRNA.
ACCESSION   XM_019475462
VERSION     XM_019475462.1
DBLINK      BioProject: PRJNA14005
            BioSample: SAMN02953594
KEYWORDS    RefSeq.
SOURCE      Candida albicans SC5314
  ORGANISM  Candida albicans SC5314
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade;
            Candida.
REFERENCE   1  (bases 1 to 414)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Assembly of a phased diploid Candida albicans genome facilitates
            allele-specific measurements and provides a simple model for repeat
            and indel structure
  JOURNAL   Genome Biol. 14 (9), R97 (2013)
   PUBMED   24025428
REFERENCE   2  (bases 1 to 414)
  AUTHORS   van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D.,
            Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B.,
            Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T.
  TITLE     Assembly of the Candida albicans genome into sixteen supercontigs
            aligned on the eight chromosomes
  JOURNAL   Genome Biol. 8 (4), R52 (2007)
   PUBMED   17419877
REFERENCE   3  (bases 1 to 414)
  AUTHORS   Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S.,
            Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T.,
            Davis,R.W. and Scherer,S.
  TITLE     The diploid genome sequence of Candida albicans
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004)
   PUBMED   15123810
REFERENCE   4  (bases 1 to 414)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (bases 1 to 414)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
REFERENCE   6  (bases 1 to 414)
  CONSRTM   Candida Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
  REMARK    Sequence and annotation update by submitter
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_032094).
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: CGD
            Annotation Status   :: Full annotation
            Annotation Version  :: A22-s07-m01-r01
            URL                 :: http://www.candidagenome.org/
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Candida albicans SC5314"
                     /mol_type="mRNA"
                     /strain="SC5314"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:MYA-2876"
                     /db_xref="taxon:237561"
                     /chromosome="6"
                     /haplotype="A"
                     /geo_loc_name="USA: New York"
                     /collected_by="Margarita Silva-Hutner"
     gene            <1..>414
                     /gene="RPL23A"
                     /locus_tag="CAALFM_C602070CA"
                     /db_xref="GeneID:3647558"
     CDS             1..414
                     /gene="RPL23A"
                     /locus_tag="CAALFM_C602070CA"
                     /note="Ribosomal protein; downregulated upon phagocytosis
                     by murine macrophage; Hap43-induced; sumoylation target;
                     Spider biofilm repressed"
                     /codon_start=1
                     /transl_table=12
                     /product="ribosomal 60S subunit protein L23B"
                     /protein_id="XP_019331007.1"
                     /db_xref="CGD:CAL0000187999"
                     /db_xref="GeneID:3647558"
                     /translation="MSGSGASGNKFRMSLALPVGAVMNCADNSGARNLYVLAVKGTGA
                     RLNRLPAAAAGDMVMATVKKGKPELRKKVMPAIVIRQSKPWRRRDGVYLYFEDNAGVI
                     VNPKGEMKGSAITGPVAKECADLWPRIASNSGVVV"
     misc_feature    10..411
                     /gene="RPL23A"
                     /locus_tag="CAALFM_C602070CA"
                     /note="60S ribosomal protein L23; Provisional; Region:
                     PTZ00054"
                     /db_xref="CDD:185418"
ORIGIN      
        1 atgtcaggat caggtgcttc cggtaacaaa ttccgtatgt ctttagcttt accagttggt
       61 gcagttatga attgtgctga taactctggt gccagaaact tgtacgtttt agccgtcaaa
      121 ggtactggtg ccagattaaa cagattacca gctgctgctg ccggtgatat ggttatggcc
      181 actgttaaaa aaggtaaacc agaattaaga aagaaagtta tgccagctat tgttattaga
      241 caaagtaaac catggagaag aagagatggt gtttatttgt atttcgaaga taatgctggt
      301 gttattgtta atccaaaagg tgaaatgaaa ggtagtgcta ttactggtcc agttgctaaa
      361 gaatgtgctg atttatggcc acgtattgct tctaactctg gtgttgttgt ttaa