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Candida albicans SC5314 Med19p (MED19), partial mRNA.


LOCUS       XM_019475455             507 bp    mRNA    linear   PLN 18-APR-2022
ACCESSION   XM_019475455
VERSION     XM_019475455.1
DBLINK      BioProject: PRJNA14005
            BioSample: SAMN02953594
KEYWORDS    RefSeq.
SOURCE      Candida albicans SC5314
  ORGANISM  Candida albicans SC5314
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade;
            Candida.
REFERENCE   1  (bases 1 to 507)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Assembly of a phased diploid Candida albicans genome facilitates
            allele-specific measurements and provides a simple model for repeat
            and indel structure
  JOURNAL   Genome Biol. 14 (9), R97 (2013)
   PUBMED   24025428
REFERENCE   2  (bases 1 to 507)
  AUTHORS   van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D.,
            Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B.,
            Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T.
  TITLE     Assembly of the Candida albicans genome into sixteen supercontigs
            aligned on the eight chromosomes
  JOURNAL   Genome Biol. 8 (4), R52 (2007)
   PUBMED   17419877
REFERENCE   3  (bases 1 to 507)
  AUTHORS   Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S.,
            Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T.,
            Davis,R.W. and Scherer,S.
  TITLE     The diploid genome sequence of Candida albicans
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004)
   PUBMED   15123810
REFERENCE   4  (bases 1 to 507)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (bases 1 to 507)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
REFERENCE   6  (bases 1 to 507)
  CONSRTM   Candida Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
  REMARK    Sequence and annotation update by submitter
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_032094).
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: CGD
            Annotation Status   :: Full annotation
            Annotation Version  :: A22-s07-m01-r01
            URL                 :: http://www.candidagenome.org/
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..507
                     /organism="Candida albicans SC5314"
                     /mol_type="mRNA"
                     /strain="SC5314"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:MYA-2876"
                     /db_xref="taxon:237561"
                     /chromosome="6"
                     /haplotype="A"
                     /geo_loc_name="USA: New York"
                     /collected_by="Margarita Silva-Hutner"
     gene            <1..>507
                     /gene="MED19"
                     /locus_tag="CAALFM_C601640WA"
                     /db_xref="GeneID:30515334"
     CDS             1..507
                     /gene="MED19"
                     /locus_tag="CAALFM_C601640WA"
                     /note="RNA polymerase II mediator complex subunit"
                     /codon_start=1
                     /transl_table=12
                     /product="Med19p"
                     /protein_id="XP_019331000.1"
                     /db_xref="CGD:CAL0000196428"
                     /db_xref="GeneID:30515334"
                     /translation="MTTLPNNTQSNDYYLINPENIYQSPKPTPKDNLIKLYGLIPVTK
                     SLARTNPDGSKGVKLRKSYKNHIQDLPGKHQISPAKPIPPGLLDPSIEQHPDIIKPLD
                     PELLNKALKFDRTPINGIPGFNSSDLAINDQQTLMRGDDMGEDEHGKKIKRKKKIQNG
                     ADPKRQHI"
     misc_feature    73..>387
                     /gene="MED19"
                     /locus_tag="CAALFM_C601640WA"
                     /note="Rox3 mediator complex subunit; Region: Rox3;
                     pfam08633"
                     /db_xref="CDD:430118"
ORIGIN      
        1 atgacaacat tacctaataa tacacaatca aatgattact atctaataaa tccagaaaat
       61 atttatcaat caccaaaacc tactccaaag gacaatctaa taaaactata tggattgatc
      121 cccgtgacga aatcactagc tcgtaccaat cctgatggat ccaaaggagt caaattaaga
      181 aagtcataca agaatcatat tcaagattta ccaggtaaac atcaaatatc accagctaaa
      241 ccaatccccc caggattatt agatcctctg attgaacaac atcctgatat tataaaacca
      301 ttggatccag aattattaaa taaggcatta aaatttgatc gcacaccaat taatggaata
      361 cctgggttta atagttcaga tttggcaata aatgatcaac aaactttaat gaggggagat
      421 gatatgggag aagatgaaca tggaaagaaa attaaacgta agaagaagat acagaatggt
      481 gctgatccaa aaagacaaca tatataa