Candida albicans SC5314 phosphatidylglycerophosphatase

LOCUS       XM_019475452             618 bp    mRNA    linear   PLN 18-APR-2022
            (CAALFM_C601340CA), partial mRNA.
ACCESSION   XM_019475452
VERSION     XM_019475452.1
DBLINK      BioProject: PRJNA14005
            BioSample: SAMN02953594
KEYWORDS    RefSeq.
SOURCE      Candida albicans SC5314
  ORGANISM  Candida albicans SC5314
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade;
            Candida.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Assembly of a phased diploid Candida albicans genome facilitates
            allele-specific measurements and provides a simple model for repeat
            and indel structure
  JOURNAL   Genome Biol. 14 (9), R97 (2013)
   PUBMED   24025428
REFERENCE   2  (bases 1 to 618)
  AUTHORS   van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D.,
            Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B.,
            Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T.
  TITLE     Assembly of the Candida albicans genome into sixteen supercontigs
            aligned on the eight chromosomes
  JOURNAL   Genome Biol. 8 (4), R52 (2007)
   PUBMED   17419877
REFERENCE   3  (bases 1 to 618)
  AUTHORS   Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S.,
            Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T.,
            Davis,R.W. and Scherer,S.
  TITLE     The diploid genome sequence of Candida albicans
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004)
   PUBMED   15123810
REFERENCE   4  (bases 1 to 618)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (bases 1 to 618)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
REFERENCE   6  (bases 1 to 618)
  CONSRTM   Candida Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
  REMARK    Sequence and annotation update by submitter
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_032094).
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: CGD
            Annotation Status   :: Full annotation
            Annotation Version  :: A22-s07-m01-r01
            URL                 :: http://www.candidagenome.org/
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Candida albicans SC5314"
                     /mol_type="mRNA"
                     /strain="SC5314"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:MYA-2876"
                     /db_xref="taxon:237561"
                     /chromosome="6"
                     /haplotype="A"
                     /geo_loc_name="USA: New York"
                     /collected_by="Margarita Silva-Hutner"
     gene            <1..>618
                     /locus_tag="CAALFM_C601340CA"
                     /db_xref="GeneID:30515331"
     CDS             1..618
                     /locus_tag="CAALFM_C601340CA"
                     /note="Putative mitochondrial
                     phosphatidylglycerophosphatase (PGP phosphatase);
                     essential for cardiolipin biosynthesis; rat catheter
                     biofilm induced"
                     /codon_start=1
                     /transl_table=12
                     /product="phosphatidylglycerophosphatase"
                     /protein_id="XP_019330997.1"
                     /db_xref="CGD:CAL0000176034"
                     /db_xref="GeneID:30515331"
                     /translation="MFNLNLSATLNVSRLLYNPSLCLPHITVKSFDQLVLPFTIPTAP
                     NVTIKGVVLDKDNCFAKDHDDKVWPEYEQTWKKLKEIYPKDHLLIVSNSAGTDDDINH
                     AQAKTLESNTGINVLCHSIKKPGCLNEITQYFAKLNVKPNEIIVIGDRLFTDMLMANM
                     MGSWGCWINQGVELSDKILPKLERDLYNRLVVNRPENPYFPPTPN"
     misc_feature    16..519
                     /locus_tag="CAALFM_C601340CA"
                     /note="Mitochondrial PGP phosphatase; Region:
                     PGP_phosphatase; pfam09419"
                     /db_xref="CDD:430598"
     misc_feature    order(184..198,271..276,367..369,442..447,457..462)
                     /locus_tag="CAALFM_C601340CA"
                     /note="active site"
                     /db_xref="CDD:319763"
ORIGIN      
        1 atgtttaacc taaatcttag tgcaacgtta aatgtttcaa gattgcttta taatccaagt
       61 ttatgtcttc ctcatatcac tgtgaaatca tttgatcaac ttgtgttacc attcacaata
      121 ccaacagcac caaatgtaac cattaaaggc gtagtgttag acaaagacaa ttgttttgca
      181 aaggatcatg acgacaaagt ctggcccgaa tatgaacaaa catggaaaaa attaaaggaa
      241 atatatccaa aagatcattt attaattgtt agtaattctg caggaaccga tgatgatata
      301 aatcatgccc aagcaaaaac attagaatca aacactggaa taaatgtact ttgtcattca
      361 attaaaaaac caggatgttt aaatgaaatc actcaatatt ttgctaaatt aaatgttaaa
      421 ccaaatgaaa tcattgttat tggtgataga ttatttactg atatgcttat ggctaatatg
      481 atgggatcat ggggatgttg gataaatcaa ggtgttgaat taagtgataa aattttgcct
      541 aaattagaaa gagatttata taatagattg gttgttaatc gtcctgaaaa tccctatttt
      601 ccaccaactc caaattaa