Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_019475451 660 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_019475451 VERSION XM_019475451.1 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 660) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 660) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 660) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 660) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 660) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 660) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..660 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>660 /locus_tag="CAALFM_C601330CA" /db_xref="GeneID:3641643" CDS 1..660 /locus_tag="CAALFM_C601330CA" /note="Ortholog of C. dubliniensis CD36 : Cd36_61450, C. parapsilosis CDC317 : CPAR2_602710, Candida tenuis NRRL Y-1498 : cten_CGOB_00240 and Pichia stipitis Pignal : psti_CGOB_00191" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_019330996.1" /db_xref="CGD:CAL0000201241" /db_xref="GeneID:3641643" /translation="MVHNVLFDPPLPDGQRINVGNNTIIENIYSIYNLAVFKNIFRIY LTFLLIQYILIYVCVPLDDIENRPPIGIISTAYTLIMFVINASVLPLCSGTIPTVLSL RCLFSSFVLEFIGLILNITAVIQSVRAGAMYEIERERGKVVTKTRVDKYIIFFQITSM IFSLLSTICVFILMIICEKALEYIGNKVDRRVLKRNRKIRIGSESIDDYRYRLDRYYS V" ORIGIN 1 atggttcata acgtattatt tgatcctcct ttaccagatg ggcagagaat caatgttggg 61 aataatacaa taattgaaaa catttatagt atttataatc ttgccgtgtt taaaaacatt 121 ttccgaattt atttgacatt cttattgatt caatatattc taatatatgt ttgtgttcca 181 ttagatgata ttgaaaatcg acctcccata ggtattatat caacagcata tacactaatt 241 atgtttgtta ttaatgccct ggttttacct ttatgttcag gcactatacc aacagtcctt 301 tcattacgat gtttatttag ttcatttgtg ttggagttta ttggattaat attgaatatc 361 actgcagtta ttcaaagtgt tagagctgga gccatgtatg aaattgaacg tgaacgtggg 421 aaagtagtaa cgaaaacaag agtcgataaa tatatcattt ttttccaaat tacatcaatg 481 atattttcat tactttcgac aatttgtgtt tttatattaa tgataatttg tgaaaaggct 541 ttagaatata ttggtaataa agttgataga agagtactta aacgaaatag aaagattcgt 601 atcggttctg aatcaataga tgattatcga tatagattag ataggtatta ctcagtttga