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LOCUS XM_019475450 348 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_019475450 VERSION XM_019475450.1 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 348) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 348) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 348) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 348) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 348) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 348) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..348 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>348 /locus_tag="CAALFM_C601210WA" /db_xref="GeneID:30515330" CDS 1..348 /locus_tag="CAALFM_C601210WA" /note="Ortholog(s) have endoplasmic reticulum localization" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_019330995.1" /db_xref="CGD:CAL0000185625" /db_xref="GeneID:30515330" /translation="MAPKVREDLVIPYKHVPAKPRKDSTGVIAQSLPMAAMFMRNKVL SWSALFLTVQSYLNEPINKPDADDGSQPPFVKIVFALVSVLTCYMDVFFPNTNPALRM AAKVATETPAAPK" misc_feature 16..>174 /locus_tag="CAALFM_C601210WA" /note="PAT complex subunit Asterix; Region: ASTER; pfam03669" /db_xref="CDD:461012" ORIGIN 1 atggcaccaa aagttagaga agatttggtt ataccttaca aacatgttcc agctaaacca 61 agaaaagatt ctactggtgt aatagctcaa tcattaccaa tggcagccat gtttatgaga 121 aacaaagttt tatcttggtc agcattattt ttaaccgttc aatcctattt aaatgaacca 181 attaataaac cagatgccga tgatgggtct caaccaccat ttgtcaagat tgttttcgct 241 cttgtttcag ttcttacttg ctatatggat gtcttcttcc ctaatactaa tcctgcttta 301 agaatggcag ctaaagtagc aacagaaaca ccagctgctc caaaataa