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LOCUS XM_019475447 1764 bp mRNA linear PLN 18-APR-2022 partial mRNA. ACCESSION XM_019475447 VERSION XM_019475447.1 DBLINK BioProject: PRJNA14005 BioSample: SAMN02953594 KEYWORDS RefSeq. SOURCE Candida albicans SC5314 ORGANISM Candida albicans SC5314 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade; Candida. REFERENCE 1 (bases 1 to 1764) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Assembly of a phased diploid Candida albicans genome facilitates allele-specific measurements and provides a simple model for repeat and indel structure JOURNAL Genome Biol. 14 (9), R97 (2013) PUBMED 24025428 REFERENCE 2 (bases 1 to 1764) AUTHORS van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D., Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B., Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T. TITLE Assembly of the Candida albicans genome into sixteen supercontigs aligned on the eight chromosomes JOURNAL Genome Biol. 8 (4), R52 (2007) PUBMED 17419877 REFERENCE 3 (bases 1 to 1764) AUTHORS Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S., Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T., Davis,R.W. and Scherer,S. TITLE The diploid genome sequence of Candida albicans JOURNAL Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004) PUBMED 15123810 REFERENCE 4 (bases 1 to 1764) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 5 (bases 1 to 1764) AUTHORS Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G. TITLE Direct Submission JOURNAL Submitted (04-OCT-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REFERENCE 6 (bases 1 to 1764) CONSRTM Candida Genome Database TITLE Direct Submission JOURNAL Submitted (30-SEP-2016) Department of Genetics, Candida Genome Database, Stanford University, Mail Stop-5120, Stanford, CA 94305, USA REMARK Sequence and annotation update by submitter COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NC_032094). ##Genome-Annotation-Data-START## Annotation Provider :: CGD Annotation Status :: Full annotation Annotation Version :: A22-s07-m01-r01 URL :: http://www.candidagenome.org/ ##Genome-Annotation-Data-END## COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..1764 /organism="Candida albicans SC5314" /mol_type="mRNA" /strain="SC5314" /host="Homo sapiens" /culture_collection="ATCC:MYA-2876" /db_xref="taxon:237561" /chromosome="6" /haplotype="A" /geo_loc_name="USA: New York" /collected_by="Margarita Silva-Hutner" gene <1..>1764 /locus_tag="CAALFM_C600770CA" /db_xref="GeneID:3647079" CDS 1..1764 /locus_tag="CAALFM_C600770CA" /note="Ortholog(s) have crossover junction endodeoxyribonuclease activity and role in DNA repair, DNA topological change, regulation of reciprocal meiotic recombination, resolution of meiotic recombination intermediates" /codon_start=1 /transl_table=12 /product="uncharacterized protein" /protein_id="XP_019330992.1" /db_xref="CGD:CAL0000198284" /db_xref="GeneID:3647079" /translation="MEPTPLIELSDDEDEIDFKVNITRKPISLTTNEPEVIELLSDSC TEDPPILTSIQSSQTKDFRSSPNPKPNQTFISTNNQTSISKPTYTSTEQITDVIVIES DEEETSIVQKISGTSKIVASTRLPSSPVSIANQEPEKTMNDSIVDSSFSFSMDNLVTT IRNGGPKLSSSKPVSQPVSAGSGLSSGPNPVSSSFKMPPFVKWLSSDDDDDDEKEEDP IVPTSQPVPHETNFDAQPAKRSRTVQEPPQSAPKPVKRSKTVDQVIDLPRIDNFQYTS KDLKEANRATRKKEELLAEMELHMAESVYSRLEDLVKDFQSRVIKASYTLPVIFWKRN INAAYDKERDIFIPCHPRRVLEKTFVLYYHASVFFEKLRNHTLKVDVSAAKQQALAIT PNEYNVILVVEGYDILLNKIKAYEQRLFKNQVLQGLNVEEQRRRRKDDTEMSKYPSSS EIEHLVNKAQIDLKANIFMVRAKQESIMWLNSFTHMIGQSLYDKFERNQGLANLGNVK SGADTKSTFLQSMKQFNLMTQAKADILYVSHQSLHSMYTKLRSHGTLGKDNLKRNIVP PSVDSSMKKFFTADDPDMVIN" misc_feature 835..1479 /locus_tag="CAALFM_C600770CA" /note="XPF-like nuclease domain of Saccharomyces cerevisiae crossover junction endonuclease Mms4 and similar proteins; Region: XPF_nuclease_Mms4; cd20085" /db_xref="CDD:410860" misc_feature order(1186..1188,1345..1347,1357..1362,1369..1374, 1378..1383,1393..1398,1402..1404,1432..1437,1444..1449, 1453..1458,1477..1479) /locus_tag="CAALFM_C600770CA" /note="putative heterodimer interface [polypeptide binding]; other site" /db_xref="CDD:410860" misc_feature order(1453..1455,1477..1479) /locus_tag="CAALFM_C600770CA" /note="putative nucleic acid substrate binding site [nucleotide binding]; other site" /db_xref="CDD:410860" ORIGIN 1 atggaaccaa cacctcttat tgaattgagt gacgatgaag atgagattga ttttaaagtg 61 aatattacaa gaaaaccaat aagtttgaca accaatgaac cagaagtgat tgaactactt 121 agtgattcat gtaccgaaga tcctcctatt ttgacatcaa tacagtctag tcaaacgaaa 181 gacttccgat caagtcccaa cccgaaacca aaccaaacat tcatttccac aaacaaccag 241 acatcaattt ccaaacccac atacacttca actgagcaaa ttacagatgt gattgttata 301 gaaagtgacg aagaggaaac tagcatagtg cagaaaatta gtggaacttc aaaaatagtg 361 gcgtcaacgc ggttaccatc gtctccagtt agcattgcaa accaagaacc agagaaaaca 421 atgaatgatt caatagtgga ttctagtttt tcgtttctga tggataatct tgtaacgaca 481 atccgtaatg gtggacctaa actatcatca tcaaagcctg tttctcagcc tgtatcagct 541 ggatcgggat tatcatctgg cccaaaccct gtttctagta gttttaaaat gccaccgttt 601 gtgaaatggc tttctagtga cgacgacgac gatgatgaaa aagaagaaga tccaattgta 661 cctacatcac aaccggttcc acatgaaaca aattttgatg ctcaaccagc aaaaagatcc 721 agaactgtgc aagaaccacc tcaactggca ccaaaaccag taaagcgttc taaaactgtt 781 gatcaagtaa tagatttgcc gcgtattgat aatttccagt atacatcaaa ggatttaaaa 841 gaagctaaca gagctacaag aaagaaagaa gaacttttag cagaaatgga attacatatg 901 gcggagtctg tctattctag attggaagat ttggtcaaag atttccaact gcgtgttata 961 aaggcttcat atacgttacc agtgattttt tggaaacgaa atataaatgc agcttatgat 1021 aaagaaagag atatatttat accgtgccat cctagaaggg ttcttgaaaa gacatttgtt 1081 ttgtattacc atgcatcagt attttttgaa aaactacgaa accacacttt gaaagttgat 1141 gtatctgcag caaagcaaca agcattggca ataacaccaa atgaatataa tgtaatactt 1201 gtggttgaag ggtatgatat actcttgaac aaaatcaaag catatgaaca gagattattt 1261 aaaaatcaag ttcttcaagg tttaaatgtt gaagagcaaa gaagacgaag aaaagatgat 1321 acggaaatgt ctaaataccc gtcctcgtca gagattgaac atttagtcaa caaggcccaa 1381 atagacttga aggcaaacat ttttatggta agagcaaaac aagaatcgat tatgtggctc 1441 aactcattta cacacatgat tggtcaatcg ctatatgaca aatttgaaag aaatcaggga 1501 ttggcaaatc tcggaaatgt taaatcggga gcagatacca aatcaacttt tttgcaatca 1561 atgaaacaat tcaatttgat gactcaagca aaagcagata ttttgtatgt actgcatcag 1621 tctctacatc tgatgtacac caagcttcga tctcatggaa cgttgggcaa agataatttg 1681 aagagaaaca ttgtgccacc ttcagtcgat agtagtatga agaagttttt cactgctgat 1741 gatccagata tggtcattaa ttaa