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Candida albicans SC5314 Dpm2p (DPM2), partial mRNA.


LOCUS       XM_019475440             258 bp    mRNA    linear   PLN 18-APR-2022
ACCESSION   XM_019475440
VERSION     XM_019475440.1
DBLINK      BioProject: PRJNA14005
            BioSample: SAMN02953594
KEYWORDS    RefSeq.
SOURCE      Candida albicans SC5314
  ORGANISM  Candida albicans SC5314
            Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina;
            Pichiomycetes; Debaryomycetaceae; Candida/Lodderomyces clade;
            Candida.
REFERENCE   1  (bases 1 to 258)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Assembly of a phased diploid Candida albicans genome facilitates
            allele-specific measurements and provides a simple model for repeat
            and indel structure
  JOURNAL   Genome Biol. 14 (9), R97 (2013)
   PUBMED   24025428
REFERENCE   2  (bases 1 to 258)
  AUTHORS   van het Hoog,M., Rast,T.J., Martchenko,M., Grindle,S., Dignard,D.,
            Hogues,H., Cuomo,C., Berriman,M., Scherer,S., Magee,B.B.,
            Whiteway,M., Chibana,H., Nantel,A. and Magee,P.T.
  TITLE     Assembly of the Candida albicans genome into sixteen supercontigs
            aligned on the eight chromosomes
  JOURNAL   Genome Biol. 8 (4), R52 (2007)
   PUBMED   17419877
REFERENCE   3  (bases 1 to 258)
  AUTHORS   Jones,T., Federspiel,N.A., Chibana,H., Dungan,J., Kalman,S.,
            Magee,B.B., Newport,G., Thorstenson,Y.R., Agabian,N., Magee,P.T.,
            Davis,R.W. and Scherer,S.
  TITLE     The diploid genome sequence of Candida albicans
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 101 (19), 7329-7334 (2004)
   PUBMED   15123810
REFERENCE   4  (bases 1 to 258)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (15-APR-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   5  (bases 1 to 258)
  AUTHORS   Muzzey,D., Schwartz,K., Weissman,J.S. and Sherlock,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
REFERENCE   6  (bases 1 to 258)
  CONSRTM   Candida Genome Database
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2016) Department of Genetics, Candida Genome
            Database, Stanford University, Mail Stop-5120, Stanford, CA 94305,
            USA
  REMARK    Sequence and annotation update by submitter
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_032094).
            
            ##Genome-Annotation-Data-START##
            Annotation Provider :: CGD
            Annotation Status   :: Full annotation
            Annotation Version  :: A22-s07-m01-r01
            URL                 :: http://www.candidagenome.org/
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..258
                     /organism="Candida albicans SC5314"
                     /mol_type="mRNA"
                     /strain="SC5314"
                     /host="Homo sapiens"
                     /culture_collection="ATCC:MYA-2876"
                     /db_xref="taxon:237561"
                     /chromosome="6"
                     /haplotype="A"
                     /geo_loc_name="USA: New York"
                     /collected_by="Margarita Silva-Hutner"
     gene            <1..>258
                     /gene="DPM2"
                     /locus_tag="CAALFM_C600420WA"
                     /db_xref="GeneID:30515325"
     CDS             1..258
                     /gene="DPM2"
                     /locus_tag="CAALFM_C600420WA"
                     /note="Dolichol-phosphate mannose synthase subunit, not
                     essential for enzyme activity; flow model and Spider
                     biofilm repressed"
                     /codon_start=1
                     /transl_table=12
                     /product="Dpm2p"
                     /protein_id="XP_019330985.1"
                     /db_xref="CGD:CAL0000175581"
                     /db_xref="GeneID:30515325"
                     /translation="MGADKLIGFGMLGVAAFVFTYYTAWVFVLPFINEDNILNQFFLP
                     RDYAIKLPILLLFIAALGVGTFVGKVLIKNQQKQKSKKKAQ"
     misc_feature    7..216
                     /gene="DPM2"
                     /locus_tag="CAALFM_C600420WA"
                     /note="Dolichol phosphate-mannose biosynthesis regulatory
                     protein (DPM2); Region: DPM2; pfam07297"
                     /db_xref="CDD:462138"
ORIGIN      
        1 atgggtgccg ataaactaat tggatttgga atgcttggtg ttgctgcttt tgtattcaca
       61 tactacactg cttgggtatt tgtattacca tttatcaacg aagacaatat attgaaccaa
      121 ttctttttgc caagagatta tgccatcaaa ttaccaatat tattattatt cattgctgcc
      181 ttgggtgtgg gtacatttgt cggaaaagtt ttgattaaaa atcaacagaa acagaaaagt
      241 aagaagaaag cacaataa