PREDICTED: Drosophila takahashii ileal sodium/bile acid

LOCUS       XM_017160822            1802 bp    mRNA    linear   INV 09-DEC-2024
            cotransporter (LOC108070372), mRNA.
ACCESSION   XM_017160822
VERSION     XM_017160822.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017160822.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1802
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1802
                     /gene="LOC108070372"
                     /note="ileal sodium/bile acid cotransporter; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:108070372"
     CDS             81..1415
                     /gene="LOC108070372"
                     /codon_start=1
                     /product="ileal sodium/bile acid cotransporter"
                     /protein_id="XP_017016311.2"
                     /db_xref="GeneID:108070372"
                     /translation="MMSPHLLLVILALGYAPTTRGWSAHFRPAALKLHMAGEDRVQLT
                     LELPKANFSTLQQPDRFQFRLESTDALLASVPGENSTIPLDAFNPQTRDWTGDIVVHG
                     HFLGQTKIQVRLHDIQLNQSELPTEWSNDSSLEVKIMRPNRVVDHVFLGSIILLMSLL
                     YINFGAALNLEVLRGLITRPTAPCLGFITQVVGMPLISYALGVFIFPEAPAMQLGLFF
                     TGISPSGGASNTWTAVLGGNIHLSVLMTTVCNVAAFATMPLWVTTLGQLIFERAGIQV
                     PYRKIATYCGSLIFPLLVGLLVQRRLPRIAAFLVRLLKPISACLILFIVVFAIITNYY
                     LFYLFSWQIIIAGMALPGLGYIIAFLAAKLLHQNAADALTIAIETGIQNTGIAIFLLT
                     TTLESPEADLTTVVPVSVAIMTPLPLLGIYLYKRCTASKRNEVSVAEAERIV"
     misc_feature    522..1280
                     /gene="LOC108070372"
                     /note="Predicted Na+-dependent transporter YfeH [General
                     function prediction only]; Region: YfeH; COG0385"
                     /db_xref="CDD:440154"
     polyA_site      1802
                     /gene="LOC108070372"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gctagttgga ttttcttatt tcagttgtaa acacttgttg cgtgcgaaaa gcaaaacatt
       61 ccggctggcg aatttccatt atgatgtcac cacatctcct gctggtcatc ctggcgctgg
      121 gctacgcacc caccacccgc ggctggtcgg cccacttccg acccgccgcc ctgaagctcc
      181 acatggctgg cgaggatcgg gtgcagttga ctttggagct accaaaggct aacttctcca
      241 cgctgcagca gccggatcgc tttcagtttc ggttagaatc tacggacgcc ttgctggcca
      301 gtgtgcccgg cgagaattcc accattccac tggacgcctt caatccccag acgcgcgatt
      361 ggacgggtga catagtggtc catggtcact tcctcggcca gaccaaaatc caagtgagac
      421 tccatgacat ccagctgaac cagagtgaac tgcccaccga gtggagcaac gacagctcgc
      481 tggaggtgaa gatcatgcgg ccaaatcggg tggtggacca tgtcttcctg ggctccatca
      541 tcctgctgat gtcgctgctg tacattaact ttggagccgc cctgaatctg gaggttctcc
      601 ggggtctgat cacccggccg acggctcctt gtttgggttt catcacccag gtggtgggca
      661 tgcccctaat tagctacgcc ctgggggtct tcatcttccc ggaggctcca gccatgcagt
      721 tgggcttgtt cttcactgga atctcgccca gcggtggggc ttcgaacacc tggaccgccg
      781 tgctgggcgg aaatatccat ctatccgtgc taatgaccac cgtctgcaat gtggccgcct
      841 ttgccaccat gccgctttgg gtgaccacgc tgggccagct gatcttcgag agggcgggca
      901 tacaggtgcc ctatcgcaag atagccacct attgcggcag cttgatcttt ccgctgctgg
      961 tcggactgct cgtccagcgg cgactgccaa ggatcgccgc cttcctggtc cgcctgctca
     1021 agcccatctc cgcctgcttg atcctcttca tcgtcgtctt tgccatcatc accaactatt
     1081 acctgttcta cttgttctcc tggcagatta tcatagctgg catggctctg ccgggtctgg
     1141 gctacatcat cgcctttctg gcggccaagt tgctccatca gaacgccgcc gacgccctga
     1201 ccatcgccat tgagaccggc atccagaaca cgggcatcgc catcttcctg ctcacaacga
     1261 cgctggaatc gccggaggcg gacctcacca cagtggtgcc ggtttcggtg gctataatga
     1321 cgccgttacc actgctgggc atctatctct acaagcgatg cactgcatcc aaaaggaacg
     1381 aagtctccgt ggccgaagcg gagcgaattg tttgagatga tcggagaggc agagcttgaa
     1441 aaataacgac cctttgctat tcgtcgatat tttatacatc ggttttatcg aaacaatatt
     1501 atgaaaatat cgaaaatatc gataattttc aagccctact gagaggctga cttttacata
     1561 tccagatggc tgttgcattg ttttcatcgt tatttgtagt atttttgtac atattggttg
     1621 tttttttttt gataacttat acatcgttaa gtatgtagac gataaagcaa caaaattggg
     1681 aacaatgcaa tacatataaa gcgtattata ttccagaatt tcatacattt aagtcgaacc
     1741 caaatgtttt ggattaatca tttgacaata aagtgatatt tataacatta ccataaaaca
     1801 aa