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PREDICTED: Drosophila takahashii mitoguardin (Miga), mRNA.


LOCUS       XM_017160799            2520 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017160799
VERSION     XM_017160799.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017160799.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2520
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2520
                     /gene="Miga"
                     /note="mitoguardin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:108070358"
     CDS             534..2120
                     /gene="Miga"
                     /codon_start=1
                     /product="mitoguardin"
                     /protein_id="XP_017016288.2"
                     /db_xref="GeneID:108070358"
                     /translation="MQRLMPASWTSGGSLLPFRVSTTTKVVLFSLTAGVALMSVLSRF
                     LRRRKPPRPPRRARKYTGRRNRNSMRSPNDLISIAGSKASARSGSPVGSTLAYSDRLS
                     MASGSIGVGALMGVQSAGPAGSVVTQLTAQQLGMMGMEALDTVINFWEDALAAHYSPG
                     GLPALLTTAEDSEFCREIQNLLEMAYTLQEQSELLFLDQRSVLFREEHSIDEAAEEEA
                     AGETDDDRRSRKSGSVLSRAGSDPNFDSAESFASALDQVADLREFDGFIETSYEEYPL
                     FQTALKHHDEYTVPCRTIRAELMHCSTDTEYLAKLHCVRLAFQFLFKDPAVGQWICDA
                     GRQILTDLLCLGDKDTKEFLVGYEDMVNYLHDSSNWPCIQMELEQRNVKAMTFYDICL
                     DFIILDSFKDLDAPPASVTAVVQNRWLSNGFKETALTTAVWSVLKAKKRMLKFPNGFM
                     SHFYVISEQISPLMAWGFFGPNENLRDICHYFREQLLAFLGDIFSFQKSRFTTIEEFS
                     QDVLQHMQTRVNNIGVKFSQ"
     misc_feature    570..2111
                     /gene="Miga"
                     /note="Mitoguardin; Region: Miga; pfam10265"
                     /db_xref="CDD:463034"
     polyA_site      2520
                     /gene="Miga"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tttattaaat gaagtcactg tgacttttcc tgtcacacca tcagctgtcc gtgggtctgg
       61 caacgcccct ggggggaaac taggcctacc ccaggtggca acgctccaat cagctggatt
      121 ttttgccgcc gcgctctccc tgaaacgttg tgatgcaatt ttgttgtttt caggcctaaa
      181 agtgaaagtt tccactgata agcagccgtc gccagagacc ccgccccgta gccgaccaga
      241 ggagacccgg atccgtgtca gccagtcgcc agaagttatc gtttgggcca ccgaaagcag
      301 cgaactcgct tcgcattcca aagggcgaag ggcgcacatg gagcgcaggg tcaaagccgc
      361 gccagaaaca ccaaaagata gcgccagccg atgagcgggc atcgtggagt gggcgccgag
      421 gtctaacctc aaagcaggca gacgcacagc caccgactcg cagagatttc cgttccagct
      481 ccattcgcat tcccgcagga ttccgaggat ccacctccga ggagctcctc aggatgcagc
      541 gcctcatgcc ggcttcgtgg accagcggcg gcagtctgct gcccttccgc gtctccacca
      601 ccacaaaggt tgtcctcttc tcgctgaccg ccggcgtggc cttgatgagc gtcctctcgc
      661 gcttcctgcg acgccgcaag ccgccgcgtc cgccccgccg ggcgaggaag tacacgggcc
      721 ggcggaaccg caacagcatg cgcagtccca atgacctcat ctcgatagcg ggctccaagg
      781 cctctgcccg ttcgggcagt cccgttggtt ccactttggc ctattcggac cgcctttcca
      841 tggcctcggg ttcaattggc gtgggtgcct tgatgggcgt acagagtgcc gggccagctg
      901 gttcggtggt cacccaattg acggcccaac agctgggcat gatgggcatg gaggcgctgg
      961 acacggtgat taacttttgg gaggacgcct tggcggcaca ctactcgccc ggcggactgc
     1021 ccgctctgct gacgacggcc gaggactcgg agttctgccg cgagattcag aacctgctgg
     1081 agatggccta cacgctgcag gagcagagcg agctgctctt cctcgaccag cgctcggtgc
     1141 tgttccgcga ggagcattcc attgacgagg cggccgagga ggaggcggcg ggcgagacgg
     1201 acgacgatcg gcggtcgcgc aaatcgggca gcgtcctgag tcgcgcgggt tcggatccca
     1261 atttcgattc cgccgagagc tttgccagcg ccttagacca agtggcggat ctgcgggagt
     1321 tcgacggctt catcgagacc tcgtacgagg agtatccgct gttccagacg gcgttgaagc
     1381 accacgatga gtacacggtg ccttgtcgca ccattcgggc ggagctgatg cactgcagca
     1441 cggacaccga gtacctggcc aagctgcact gcgtccgact ggcctttcag tttctgttca
     1501 aggatcccgc cgtgggtcag tggatatgcg atgccgggcg gcagatcctc accgatctgc
     1561 tttgcctggg cgacaaggat acgaaggagt ttctagtggg ctatgaggac atggtcaact
     1621 atctgcacga cagcagcaac tggccgtgca tccaaatgga gctggagcag cgcaacgtga
     1681 aggccatgac cttctacgac atctgcctgg attttatcat cctggattca tttaaggacc
     1741 tagatgctcc gcccgccagc gtgacggcgg tggtgcagaa tcgctggcta tccaacggat
     1801 tcaaagagac ggccctaacg acggccgttt ggtcggtgct gaaggccaag aagcggatgc
     1861 tgaagttccc caacgggttc atgtcgcact tctacgtgat atccgagcag atatcgccgc
     1921 taatggcctg gggcttcttc gggcccaacg agaacctgcg cgacatctgc cactacttcc
     1981 gggagcagct gctcgccttc ctgggcgaca tcttcagctt ccagaagagc cgcttcacga
     2041 ccatcgagga gttctcgcag gatgtcctgc agcacatgca gacgcgcgtg aacaacattg
     2101 gcgtgaagtt cagccagtga ttgggccttc ttctgacaca cataatactt tttggactcc
     2161 ctaatcctac gtttttcttt tacacacaac cccttttggt ttggtagttt ccctaagaaa
     2221 tgctcctcca caagttgact aattttagag ccacatgcat tcagcatata cacatcgtca
     2281 tttatgatta agctgcattt aagtcgccaa aacatttgta aaataaaact gtttacccag
     2341 ctgccaagcc tccaattgga tgggagaggt ggttactata taaatcagtg atatatggta
     2401 catccactga catttctacg cacaaaacaa gttacttaag tcaagaatca aaacatgaat
     2461 tagttattct ctaatttgta agtcccttaa aagctattca cttgttttgt taacactttg