Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017160772 2994 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017160772 VERSION XM_017160772.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Oct 18, 2021 this sequence version replaced XM_017160772.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2994 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2994 /gene="Top3beta" /note="topoisomerase 3-beta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108070341" CDS 278..2917 /gene="Top3beta" /codon_start=1 /product="DNA topoisomerase 3-beta" /protein_id="XP_017016261.2" /db_xref="GeneID:108070341" /translation="MKSVLMVAEKPSLAASLAGILSNGRCTAKRGTGNGCSTHEWTGN FRNEGSVHFRMTSVCGHVMSLDFISKYNSWDKVDPVELFGCPTEKKETNPKQHMRTFL AHEARGCDYLVLWLDCDKEGENICFEVMDAVQHVIHNVYSRQVTYRAHFSAITDKDIK GAMETLGHPNENEAKSVDARQELDLRIGCAFTRFQTKFFQDRYGDLDSSLISYGPCQT PTLGFCVKRHDDIQTFKPESFWHLQLLAGQPEFTLDWARGRVFKKDIAIMLLNRVKEH KEATVESVGSKEAFKSKPQALNTVELMRICSSGLGIGPFQAMQIAERLYTQGYISYPR TETNQYPTNFDLPAVLHVLKPSGDFGEEARSILGDMQAPRKGKDAGDHPPITPMKLGN RSDFDRDTWRVYEFICRHFMGTVSRDLKYRVTTAKLRVGLESFSCTANVLIDAGFTRV MTWQAFGRDEPMPPFVQGTQVAINDVRLTESQTGPPDYLTESELITLMEQHGIGTDAS IPVHINNICQRNYVHIENGRKLIPTTLGIVLVHGYQKIDPELVLPTMRTEVERMLTLI AQGSADFQDVLRHAIQIFKLKFMYFVKNIANMDALFEVSFSPLAESGKAHSRCGKCRR YMKYIQTKPARLHCSHCDETYALPMGNVKVYREFKCPLDDFDLLAFSTGVKGRSYPFC PYCYNHPPFSDMPHLGGCNTCTHATCPHSLNTLGISGCVECPTGVLVLDCTLAPTWKL GCNRCDVIINCFKGATKITVEEAKCQECGAQQVNVVYKSDKSKFKDGSEEKSGCIFCS TDFSHLVEKHRAVASRPVRSGGGSRGGKVGRGGGGVGGPAGAAGGAATAGGGGSGPGG GGRGGRGGRQPKDKMAQLAAYFV" misc_feature 287..2620 /gene="Top3beta" /note="DNA topoisomerase I; Validated; Region: PRK07219" /db_xref="CDD:235971" polyA_site 2994 /gene="Top3beta" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gttacgtttg gagtgggatt ttttagtgct gccaaaaaga aatgcccatg aaattggtta 61 aatagtttat tgggatttca ggcacaaata cggagaacat cgctgcccaa gtgtactcac 121 tgtgcagggc ggaacggaag ccacgaaccc gaaacgaaac cggcgcggtg cggcaatcgg 181 aaaagtcatc aattgtattg gccagcccat tggaggatct gcatcttcat tgggattcgg 241 gatcggaatc ggaatcggga tcgggatctc agggaccatg aagagcgtgc tgatggtggc 301 cgagaagccc tcgctggctg cctcgctggc ggggattctc tcgaacggac gctgcacggc 361 caagaggggc accgggaatg gctgctccac gcacgagtgg accggcaact tccgcaacga 421 gggcagcgtc cacttccgca tgacctccgt ttgcggccat gtcatgtcgc tcgatttcat 481 cagcaagtac aactcgtggg acaaagtgga tcccgtggag ctcttcggct gtcccaccga 541 gaagaaggag acgaatccca agcagcacat gcgcaccttc ctcgcccacg aggcgcgcgg 601 ctgtgattac ctcgtccttt ggctcgattg cgacaaggag ggcgagaaca tttgcttcga 661 ggtgatggac gccgtccagc atgtcatcca caatgtgtac agccggcagg tcacctaccg 721 cgcccacttc tcggccatca cggacaagga catcaaggga gcgatggaga cgctcgggca 781 tcccaacgag aacgaggcca agtcggtgga tgcgcgccag gagttggatc tgcgcattgg 841 ctgtgcgttt acgcgcttcc agacgaagtt cttccaggat cgctacggcg acctggactc 901 ctcgctcatc tcctacggcc cctgccagac gcccacgctg ggattctgcg tgaagcggca 961 cgacgacatc cagaccttca agcccgagag cttctggcac ctgcagctgc tcgccggcca 1021 gccggaattc acgctggact gggcgcgcgg tcgggtgttc aagaaggaca tcgccatcat 1081 gctgctgaat cgggtcaagg agcacaagga ggcgaccgtg gagagcgtgg gcagcaagga 1141 ggctttcaag agcaaaccgc aagccctgaa caccgtcgag ctgatgcgga tctgcagctc 1201 cggcctgggc attggcccgt ttcaggccat gcagatcgcg gagcgactgt atacgcaggg 1261 ctatattagt tatccgcgca cggagaccaa tcagtatccg accaacttcg atctgcctgc 1321 ggtgctgcat gtgctgaagc catcggggga tttcggcgag gaggcgcgct ctattctcgg 1381 tgatatgcag gcgccgcgaa agggcaagga tgccggcgac catccaccga ttacgcccat 1441 gaagctgggc aatcgcagcg actttgatcg cgacacctgg cgcgtctacg agttcatctg 1501 ccggcacttt atgggcaccg tgtcgcggga tctcaagtat cgcgtgacga cggccaagct 1561 gcgcgtgggc ctggagagct ttagctgcac ggccaatgtg ctgatcgatg ccggcttcac 1621 cagggtgatg acctggcagg cttttggcag ggatgaaccg atgcctccct tcgttcaggg 1681 cacccaggtg gccatcaacg atgtgcggct gaccgaaagc caaacgggtc cgcccgatta 1741 cctcaccgaa tcggagctaa tcacgctgat ggagcagcac ggcatcggca cagatgcctc 1801 cataccggtg cacatcaaca acatttgcca gcgcaactat gtgcatatcg agaacgggcg 1861 caagttgatt ccaacaacgc tgggaattgt tttggtgcac ggctatcaga agatcgatcc 1921 cgagttggtg ctgcccacca tgcgaacgga ggtggagcga atgctaacgc tgattgccca 1981 gggatcggcc gatttccagg atgtcctgcg ccacgccatc cagatcttca agctgaagtt 2041 catgtacttt gtgaagaata tcgccaatat ggacgccctg ttcgaggtct ccttctcgcc 2101 gctggccgag tcagggaagg cgcattcgcg gtgcggcaag tgcaggcgct acatgaagta 2161 catacagacc aaacccgcgc ggctgcactg ctcgcattgc gacgaaactt atgccctgcc 2221 tatgggcaat gtgaaggtgt atcgcgagtt caagtgcccg ctggatgact tcgatctgct 2281 ggccttctcc accggcgtca agggtcgttc gtatcccttc tgcccgtact gctacaacca 2341 tccgccgttc agcgatatgc cgcatttggg tggctgcaac acctgcacgc atgccacatg 2401 cccgcactcg ctgaacacgc tgggcatctc cggctgcgtg gagtgcccca ccggcgtcct 2461 cgtgctcgac tgcaccctgg cgcccacctg gaagctgggc tgcaaccgct gcgacgtgat 2521 catcaactgt ttcaaggggg ccaccaagat cacagtggaa gaggccaagt gccaggagtg 2581 cggcgcccag caggtgaacg tcgtctacaa gtcggacaag agcaagttca aggacggcag 2641 cgaggagaag agcggctgca tcttctgctc cacggacttc tcccacctgg tcgagaagca 2701 tcgggcggtg gcctcgcgac ccgttcgctc tggcggcggc tcccggggag gaaaggtggg 2761 acgtggtggc ggcggagtag gtggacccgc tggtgccgcc ggtggagcgg cgaccgctgg 2821 cggcggcggt tctggtcctg ggggcggtgg gcgtggcgga cgcggcggga gacagcccaa 2881 ggataagatg gcccagctgg cggcgtattt cgtttgaaga agacccctag attgcattta 2941 acacaaccac aggaacacaa agccgaataa aagaaacgaa atttgtataa agaa