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LOCUS XM_017160762 4847 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_017160762 VERSION XM_017160762.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017160762.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4847 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4847 /gene="Tis11" /note="Tis11 zinc finger protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108070333" CDS 389..1711 /gene="Tis11" /codon_start=1 /product="protein TIS11 isoform X1" /protein_id="XP_017016251.2" /db_xref="GeneID:108070333" /translation="MSATVVQKSTTVANSHFFECSDIFQAVASDRDRDHLQQQQQQQQ QLQDLVLDNNNSSSSSNMEQHHQQQQPHRHHGALTRTISQPAQQRHQLIQQQQQQQQQ QQQQPPVASLVTIIENLGNMNLHRKLERTQSEPLPQQPMNTSRYKTELCRPFEEAGEC KYGEKCQFAHGYHELRNLQRHPKYKTEYCRTFHSVGFCPYGPRCHFVHNADEARAQQA AQAAKSSSSQSQSQSQQQQSSSSSSSQQQQSFSSKSNQSSQSNSSNNSSQQFYLPLSP PLSMSTGSDRESPTGSLSLSPTNSLTSFPFHDALPILASNGGGGASNSSASSTSSSSG LGLGMSMGMVMGMGMGMGMGMGHHGPATPPESPNVPISPVHTPPPYDVVVSGPNSASG AAGSKQLLQKSVSTPMQQEDSTPRLPVFNRLSSAVEAYQQQQQSNLVL" misc_feature <788..>1012 /gene="Tis11" /note="CCCH-type Zn-finger protein [General function prediction only]; Region: CTH1; COG5063" /db_xref="CDD:227395" polyA_site 4847 /gene="Tis11" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctggcaacac tgagtgcaag ttttgatttc gatctggttg gttgtgtctc acggacgtgc 61 tgcgtctctt ttgttgtgtt ttttgcgaac gagcgaggag cgacaggacc tctgcgcccg 121 tacccaaact gatttttttt attgttgcaa tgcaatattc gcggaaccaa taacaacaac 181 aacacacata actcaacatt caagtgcaaa gcaaatacaa atcaaacaaa aaaagcaaag 241 aaaataaaaa gaaatatagc aaaaacaaac cgaaaaaatc gcatattttt tcagtcttgt 301 ccagtggaaa atagaaaagc aacaccaaca acaataacaa caacaacggc ggaatcaaat 361 tcaatatctg ttaaacgaga accacaaaat gtctgctact gtagtgcaga aatccacgac 421 ggtggctaat tcgcattttt tcgagtgcag cgacatattc caagcggtgg ccagcgaccg 481 tgatcgcgat catctccagc agcagcagca gcagcagcag caacttcagg atctcgtcct 541 ggacaacaac aacagcagca gcagcagcaa catggagcag caccaccagc agcagcagcc 601 acatcgccac catggcgccc tcacacgcac catttcacag ccggcccagc agaggcacca 661 gctcatccag cagcagcaac agcaacagca acagcagcag caacagccac cggtggccag 721 tctggtgacc atcatcgaga acctgggcaa catgaacctg caccgaaagc tggagcggac 781 gcagtcggag ccactgccac agcagccgat gaacacctcc aggtacaaga cggagctgtg 841 ccgccccttc gaggaggccg gcgagtgcaa gtacggcgag aagtgccagt tcgcccatgg 901 ataccacgag ctgcgcaacc tgcagcggca tcccaagtac aagaccgagt actgccgcac 961 cttccacagc gtgggcttct gtccctacgg gccgcgctgt cactttgtcc acaatgcgga 1021 cgaggcccgt gcccagcagg cggcccaggc agccaagtcc tcctcctccc agtcgcagtc 1081 gcagtctcag cagcagcagt cgtcttcctc gtcgtcttcc cagcagcagc agagcttctc 1141 gtcgaagagc aaccagagca gccagagcaa cagcagcaac aacagcagcc agcagttcta 1201 cctgccgctg agcccaccgc tgagcatgag cacgggatcc gaccgggagt cgcccaccgg 1261 atcgctgtcc ctgagtccca ccaactcgct gaccagcttc cccttccacg acgccctgcc 1321 gatcctggcc tccaatggcg gcggcggcgc cagcaacagc tccgcctcgt ccacatcctc 1381 gagctcgggc ctcggcctcg gcatgagcat gggcatggtg atgggcatgg gcatgggaat 1441 gggcatggga atgggccacc atggaccggc cacgccgccc gagagtccca atgtgcccat 1501 ttcgccggtg cacacgccgc cgccctacga tgtggtggtc agcggaccca attccgcatc 1561 tggagcagcg ggcagcaagc agctgctgca gaagagcgtc agcacaccga tgcagcagga 1621 ggactcgacg cccaggctgc cggtgttcaa tcgcctgagc tccgcggtgg aggcctacca 1681 gcagcagcag cagtccaatt tggtgctcta aggaggagga ggaggaatta caaagaagag 1741 aaacactatc caacatccaa tcacacgcca tccatccaag catccctcca tcagcaagca 1801 aaccacaaac agcatccttg acaaaatctc agtagcgagc aatccaaaca attccttccg 1861 gaatccaaat tcaaattcaa atccaagtac aaccatcccc tagatgtgaa acgatctttg 1921 atatgatttc tctcatgctg tgacagtcaa tcgttttcgt taaatatgag aaggaccgaa 1981 ggacctaaga cgattaggta gatagatacg taaatgacaa acaaacaatc caagcaaacg 2041 atgatcttaa actaaaagct aaacgctgaa tcgctaaact aaaactaaaa ctaaacagaa 2101 aggaagaagg aaagcctaac gaaacattct ttaaaactgg acaagacgag aaacgaaatg 2161 ggaatcttca gcgaatgttg ctcaaatcga agtgaaagcg agaatcaaca aacggccaac 2221 gacgaacgtg aatatcgttc ctgcatttat atagaaccta ctgcagtgca cccattagaa 2281 ccccagcaca acaacgcacc tgtcgctttt gttcaatatt tataggccac gcactttgga 2341 ttagtcttat gtaaaaattg attatcggtt tatatatatg gccagctcct gtatatatat 2401 cccttgatgt ggatgaagag agagtataga gttgatctga tctgatctga tatgatctga 2461 tgtcttccaa tccaagccaa gccaagccaa tcaatcaatc gatcgatcga tgagaaacgg 2521 agctaaggaa attctttaat ttattatttt ttgctaaatt tatgtaatag aaaacgttgt 2581 gtacatacga gagttaatat tttgataaag tttataaatt atgatttacc aattacatta 2641 cgattacgat tatacgatga tgatcttgga tgatatgaat attattgatg atatacctct 2701 gcaattcgtg caaccaatca caacaacaac aaataaccaa caaccaacga gcaacaaaca 2761 atttattcgt ttttcgagaa gaagttaata atggaattct gtcattgatt tgatcttact 2821 tttttttttt gtttgaaatg actacgattc tttgtactat ttaaatcgat ctatgaaatg 2881 gaaatgctga tttttaaaca ccataattta ttttcacatc tatttacata aaacatacca 2941 gatatatttt atatgcaatt aatgttaata atttatgaaa acaacacacg cgacacactc 3001 agacatacac acacacacgc acacatatat atattttgac cattgataat tttatgtttt 3061 ttatatggta tatgcgacag atcattttgt ttattatata ttatttttat ttaatttatt 3121 ttacaaacat ttttcttgat ttcttctatt tttgggggca gttatataat ttttagtgtt 3181 atgagagaaa cccttaattt atatacaact tatataaaac catattataa ttatgcctat 3241 gtcaatgata atgaagtaca tgcatatgta ataaaaacgg aaaaaacaaa ggaaaagcct 3301 taacaaaaac aacaaaaaaa gcctatttaa aatatattta tgtagggaaa agcaaccgat 3361 tgtcgatctt tgtatgtgcc ggaaaagaga gaaaaacgaa tcagaaaagt ccgaaaagcg 3421 gaaaaacaaa ctgagtacag tgttagaaat gtaaaattaa gcgagaaaaa ctgagcaaac 3481 aaaatacaaa acgcaatgca aatgcgcaaa acttaaggaa atatttaaat tatttttgta 3541 cacacttttt gccccataca aatataaata tatatatata tacatctaaa tatataatct 3601 gtaacctgta tacagcgact ttagtctaca tctattgaga cctttttttg tgcaaataat 3661 ttatatcgaa acaattgcgc cgagccgagc cgcaattcaa gtcgaactaa atcaaatatt 3721 taattactcc tatttattac cttcttcact cggcttatta aattatgtaa tgacagcaac 3781 agcagcagca gcatcaacaa atttaagcat gacttaaacg aaagagcaaa ttccacgcgt 3841 gtttatcaat ttgtgtgcac cgcgcacgag gggggtaaat aattctcaaa gtgccttatc 3901 attaatatta tatataaatt atatatacgc aaaaacacaa attatgtata gtcttgtgaa 3961 aatggaaatg gatgaggaag aggaagcgca gtgcaaaagg catattaatt atttattatt 4021 ttattttaaa gtctatttta ttttttactt taccttcgat ttgatttgat tttactctca 4081 ctcccccatg cacttgtttt gatcgaaatg gagagttacg gcagcgtgca aaggtttact 4141 aaaatgccta tatttaacat acttatatat tatactgttt tttgctctat ttaattttta 4201 aacacccaaa cacctaactt aaacctgagc tttggatgtt tattataatg attttttttt 4261 aacgcgttct tccctttgta caacaaacaa agaaaacaaa acaacaaaaa caaaaaactg 4321 tgcccagcat gaagcaagtg tggccttatc ggaataaaag aaaaccttac acttaacact 4381 tacccaagtc caagtcgtct tcctcctaag aaaaactaag tgaattaaac taaactatat 4441 gtggtactct tgaatgatcg ataaacaaag aagaacaaga aatgtaatgc cagttgaatt 4501 atacactatt tatatatact ttgttcgtta tttatataac catataccat aatatttcat 4561 agatatccgc cttggcaaca acaaatacag aaaaacaaaa caaaaatcta agaaaaatac 4621 aaaaaaaaaa aaacaacgaa aaagacaaaa caataactta gaaatgaaca caattgtaca 4681 tgaattttgt taatgctgaa acatgcctat ttatgcttcc attgcaacac tattgtgcgt 4741 atttttatat agtaaattaa agtgaaaaca atttagttta tggcaaattt taagttaaat 4801 agcaactaaa gaaaaacgtt acaaaataaa tgaaaaaata aatacaa