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PREDICTED: Drosophila takahashii vanin-like (vanin-like), mRNA.


LOCUS       XM_017160744            1791 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017160744
VERSION     XM_017160744.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017160744.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1791
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1791
                     /gene="vanin-like"
                     /note="vanin-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 5 Proteins"
                     /db_xref="GeneID:108070321"
     CDS             18..1685
                     /gene="vanin-like"
                     /codon_start=1
                     /product="vanin-like protein 1"
                     /protein_id="XP_017016233.2"
                     /db_xref="GeneID:108070321"
                     /translation="MAKNWWRLLLLAFLILGLMPGMSHQAALSDSDYYTAGVVEFRQS
                     ILSLSAWSDALEGYVEIINSENASATDIIVFPESTLNSVGSTTFVPNPEDQINPCLSD
                     PEFKVYEEFLVTLSCAARNASKYIVINLTEKQKCEDVPEDTRPCASNGLNVFNTNVVF
                     DRQGVVVSRYRKVHLYGEAKNNTYLPELSTFETDFGVTFGHFICFDILFYTPAHQLIL
                     EQGITDFVYPAMWFSQLPFLTAVQTQQGWAYANDVNLLASGASRPSIGNSGSGIYHGR
                     SGTLTSVMNQDSGERAIYVAQVPKYSRSRTLQKRVRRSTPEVKSRQVASSTSFYMKRD
                     YVQNYETELLQFDEGNSGAINRTICQGSFCCNFDIAWRSLGTAVENGSYYSYRLGTYD
                     GWRNEQQVDANYIRNCGVFTCSGESIDDCGKLLATEGEAQQSRVTFTRLEIGVTYPES
                     REFLLFPDTLLDNLLPLEPNQFDWSQQKPSDDSYVHEVRFALKESQEVSNLLTFAIYG
                     NYYDNECTFGVGTEEEQLACGYRSGSTRLSIYGGWLVILAIALTGAQ"
     misc_feature    117..935
                     /gene="vanin-like"
                     /note="biotinidase and vanins (class 4 nitrilases);
                     Region: biotinidase_like; cd07567"
                     /db_xref="CDD:143591"
     misc_feature    order(246..248,531..533,543..545,549..551,627..632,
                     636..641,705..707)
                     /gene="vanin-like"
                     /note="putative active site [active]"
                     /db_xref="CDD:143591"
     misc_feature    order(246..248,531..533,627..629)
                     /gene="vanin-like"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:143591"
     misc_feature    order(534..548,564..572,630..632,636..650,657..662,
                     723..728,732..740,744..749,819..824)
                     /gene="vanin-like"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:143591"
     misc_feature    1002..1556
                     /gene="vanin-like"
                     /note="Vanin C-terminal domain; Region: Vanin_C;
                     pfam19018"
                     /db_xref="CDD:465946"
ORIGIN      
        1 ctcagactct cttggcaatg gcgaagaatt ggtggcgact tctcctcctg gcgttcctaa
       61 tcctagggct aatgcctggc atgagtcacc aggctgccct ttccgattcg gattactata
      121 cggccggagt ggtggagttc cgccagtcga tcctcagtct gtcggcctgg tcggacgccc
      181 tcgagggcta tgtggagata ataaactcgg agaatgccag tgccacggac attattgtgt
      241 tcccggagag caccctcaat tcggtgggtt ctactacctt tgtgcccaat cccgaggacc
      301 agataaatcc ctgcctgagt gaccccgagt tcaaagttta cgaggagttc ctggtgaccc
      361 tgtcgtgtgc ggcccgcaat gccagcaaat acattgtgat caatctcacc gagaagcaga
      421 agtgcgagga tgtgccggag gatacgaggc cctgtgcctc caatggactg aatgtcttca
      481 ataccaacgt ggtcttcgat cgccagggag tggtggtgtc cagataccgg aaggtgcacc
      541 tgtacggcga ggccaagaac aacacctacc tgccggaact gagcaccttc gagacggact
      601 tcggggtcac cttcgggcac ttcatctgct tcgacattct cttctatacc ccagcccacc
      661 aactcatctt ggagcagggc atcacggact tcgtctaccc ggccatgtgg ttctcccagc
      721 tgcccttcct tacagctgtt cagacccaac aaggttgggc ctatgccaac gatgtcaatc
      781 tcctggcttc tggggccagt cgtccctcga ttggcaacag tggctcgggc atttatcatg
      841 gacgctcggg cactttgacc agtgtcatga atcaggattc cggtgagcgg gccatctatg
      901 tggcccaggt gcccaagtat tcgcgcagta ggactcttca gaaacgtgtg aggaggagca
      961 cgccggaggt gaaatcccgc caggtggcgt cttcaacgag tttctacatg aagcgcgatt
     1021 atgtgcagaa ctacgagacg gagttgcttc agttcgacga gggaaatagc ggcgccatta
     1081 ataggaccat ctgccaggga agcttttgct gcaacttcga tatagcctgg agatccctgg
     1141 gaactgcggt ggagaacggc agctactata gctatcggct ggggacctac gatggttggc
     1201 gcaacgagca gcaggtggat gccaattaca ttcgcaactg cggagtgttc acctgttccg
     1261 gtgagtccat cgatgattgc ggcaaactgc tggccaccga gggcgaggct cagcagtcgc
     1321 gggtaacctt cacgcgtctg gagatcgggg tcacctatcc agagtcgcga gagtttctgc
     1381 tgtttcccga caccctgctg gataatctgc tgcccctgga accgaatcag ttcgattggt
     1441 cgcagcagaa gccctctgac gatagctacg tgcacgaagt tcgctttgct ctcaaggaat
     1501 cccaggaggt gagcaacctg ttgacctttg ccatctatgg caattactat gacaacgagt
     1561 gcacttttgg cgttggcacc gaggaggagc aactggcctg tggctacaga agcggatcca
     1621 cgaggcttag catctatggg gggtggctgg ttatcctggc tattgccttg accggcgctc
     1681 aataagatca aagtggaaat tatctaagga tcacaatttt ttttatacac ctattgctcg
     1741 atactaacag tatttatata ataaaaatta ataaaaatta ctttcgactg g