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LOCUS XM_017160739 2757 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_017160739 VERSION XM_017160739.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Oct 18, 2021 this sequence version replaced XM_017160739.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2757 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2757 /gene="pdgy" /note="pudgy; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins" /db_xref="GeneID:108070318" CDS 376..2169 /gene="pdgy" /codon_start=1 /product="uncharacterized protein pdgy" /protein_id="XP_017016228.2" /db_xref="GeneID:108070318" /translation="MNPAAQLLRLRSATALSSAATRSISTNRRERTTSTASAQRERTQ GVSETDKFLHYSAEDGYYKTSPFDPVTIPNVPLHEYVWRDFKKWERRTAAVCVITDRQ YTFAQMRDASAAFAVRLQTKFQLHKPDVMAICLPNIPEYPIATLGAIEAGLTVTTVNP VYTPDEIARQLTFSGAKFLVGTVSGFATLSQASKLVGRQIPIAVVRTSAEEALPEGAI DFSELTSTQNVRYEDLVAPKEATADDMVFLPFSSGTTGLPKGVMLSHNNITSNCEQVQ ASLPLDLLGSQETLPGVLPFFHIYGLTVVMLSKLGQGCRLATMPAFKPDDFMRSLDKY KGSILNLVPPIALFMINHPKMTQETAPHLKVVMSGAAPIGQHDVERFLHKFPNTSFKQ GYGMTEASPVALLTPDGNKVYASTGVLPASTEAKIVPLDGVDAKGVGPRTTGELCVRG PQVMAGYLNNEEANKVTFYPGNWLRSGDVAFYDEDGLFYITDRMKELIKVKGFQVPPA ELEAVLRDHPKILEAAVFGIPHELNGEAPRAIVVLRQGEKASAEEISAYVAERVAHYK KLEGGVIFVDEVPKNPTGKILRRELKEKFSD" misc_feature 652..2136 /gene="pdgy" /note="Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL); Region: Firefly_Luc_like; cd05911" /db_xref="CDD:341237" misc_feature order(1117..1119,1126..1143,1147..1152) /gene="pdgy" /note="acyl-activating enzyme (AAE) consensus motif; other site" /db_xref="CDD:341237" misc_feature order(1267..1269,1483..1491,1552..1566,1807..1809, 1843..1845,1852..1854,1858..1860,1864..1866,1870..1872, 1885..1887) /gene="pdgy" /note="AMP binding site [chemical binding]; other site" /db_xref="CDD:341237" polyA_site 2757 /gene="pdgy" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgctggcca ctgtcttcgg agagggagag cgggagattg agagagtgca ttccgaagaa 61 ggacaacaac agcaacggca ctgcagcata cacactgaac aaaaactctg tgtacctaag 121 agcgggacag caatacggcg caccgccaac gcgatcgtgc gtcgttgttt ttgttggtgt 181 tggtgggttg gtgagtagcg cggcggcatt actttttccc agcgccgcgc ggcgtcgcca 241 gtcgtgtctc agcacccgac agcagcagac gtgtggcagc agcagcagca gtgaattccg 301 gacctcaaat acaagcatcc atatcccagc ccccaaaatc ttttctacac tgaaacgaaa 361 agcaagtgaa acgccatgaa tccagccgct cagttgctgc gcctgcgcag cgccaccgcc 421 ttgagcagcg cggccacgcg ctccatttcg accaaccggc gcgagcggac caccagtacc 481 gccagcgcgc agcgggagcg gacgcagggc gtcagcgaga ccgataagtt cctgcactac 541 agcgccgagg acggctacta caagacctcg ccctttgacc ccgtcaccat tcccaacgtc 601 cctttgcacg agtacgtgtg gcgcgacttc aagaagtggg agcgacgcac agccgcggtt 661 tgtgtgatta ccgatcgcca gtacactttc gcccagatgc gcgatgccag tgccgccttc 721 gccgttcgtc tgcagaccaa gttccagctg cacaaacccg atgttatggc catctgtctg 781 ccgaatatcc ccgagtatcc catcgccacc ctgggcgcca tcgaggcggg cctcacggtg 841 accacagtga atcccgtcta cacgccggac gagatcgcca ggcagctgac cttcagcggg 901 gccaagttcc tggtgggaac ggtgtccgga ttcgcgaccc tgagccaggc cagcaaactg 961 gtgggccgcc agataccgat cgctgtggtg cggacgagtg cagaggaggc gctgcccgag 1021 ggagccatcg actttagcga gctgacgagc acccagaacg tgcgctacga ggacctggtg 1081 gcgcccaagg aggccaccgc cgacgacatg gtcttcctgc ccttctcctc cggcaccacc 1141 ggcctgccca agggcgtcat gctctcgcac aacaacatca ccagcaactg cgagcaggtg 1201 caggcctcgc tgcccctgga cctcctgggc tcccaggaga cgctgcccgg cgtcctgccc 1261 ttcttccaca tctacggcct gaccgtcgtg atgctctcca agctcggcca gggctgccgg 1321 ctggccacca tgcccgcctt caagccggac gacttcatgc ggtcgctgga caagtacaag 1381 ggcagcatcc tcaacctggt gccccccatt gccctgttca tgatcaacca ccccaagatg 1441 acgcaggaga cggcgcccca tttgaaggtg gtgatgagcg gagcagctcc cattggccag 1501 cacgatgtgg agcgcttcct gcacaaattc ccgaacacct ccttcaagca ggggtacggc 1561 atgaccgagg cctcgcccgt ggccctcctg acgcccgatg gcaacaaggt ctacgcctcc 1621 accggagtgc tgccggccag cacggaggcc aagatcgtgc ccctggacgg cgtcgatgcc 1681 aagggcgtgg gcccgcgcac caccggcgaa ctgtgcgtcc ggggacccca ggtgatggcc 1741 ggctacctga acaacgagga ggccaacaag gtcaccttct atccgggcaa ctggctgcgc 1801 agcggcgatg tggccttcta cgacgaggac gggctcttct acatcacgga ccgcatgaag 1861 gagctgatca aggtgaaggg cttccaggtg ccgccggccg agctggaggc agtgctgcgc 1921 gatcacccca agatcctgga ggcggccgtc ttcggtattc cccacgagct caacggcgag 1981 gctccgcgcg ccattgtggt gctgcgccag ggcgagaagg ccagcgccga ggagatctcc 2041 gcctacgtgg ccgagcgggt ggcccactac aagaagctcg agggcggcgt gatcttcgtg 2101 gacgaggtgc ccaagaatcc caccggaaag atcctgcgcc gcgagctcaa ggaaaagttc 2161 tccgactaga cgatgggcag cggagggatc ttcataggct aaggctatat tttttgtgat 2221 ttttttttga ttgttcgtct caatcgggga tgttgggccc atagattcct ggggttcttc 2281 aagagcttcg ttggtttcat tggcgccgag ccccgcagaa catgtacgta taggatgaac 2341 atcaatgttg gccccgtgat cccgcgatcc gtgggctctg gtttagacat tgcatttacc 2401 acttcgaaaa tacttagttc ttaggcttag gcataggtct cgattagtcg ctcgattggt 2461 ccatagttag taagcgtagg ctaggcagac gttaggccca atccataaac aagtacgtat 2521 ctgtaaagtg tattctgtat gcttgtactc taacctttga ttatacttaa tgacgaaccc 2581 gatattttac tatgatattc ccctatatac ctacatatat gtatcttttt tttgcctagt 2641 accataagat aattgattgt taatcgtatt gaaagacggc ggcatgccaa atccattact 2701 gtatatgcca tgtatgccat gatgtttgaa aataaagacg aaatgaacta gttgaaa