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LOCUS XM_017160582 6302 bp mRNA linear INV 09-DEC-2024 Nup205 (Nup205), mRNA. ACCESSION XM_017160582 VERSION XM_017160582.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017160582.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6302 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6302 /gene="Nup205" /note="nuclear pore complex protein Nup205; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108070200" CDS 83..6232 /gene="Nup205" /codon_start=1 /product="nuclear pore complex protein Nup205" /protein_id="XP_017016071.2" /db_xref="GeneID:108070200" /translation="MDGVTEDMWTPYKHLYSVFQATVANPSGVTSDLELCLKKYKHSF TNFLRNPAKSEKSRGHLRNALNEGIPLPGQSRKIKLSQDLVDEALILSDMFDLDEVFA VELLCTAQRQQMHHPGLPRGLVAVLLYYDGRKAISCALRDMFQAVSGVSWSTELPREI TCLVTNYAQSLVEDSNILGRLLELLEEMDVDKECILLTKNRAFGSKKHQNQVLGLYED IQRAVAMALFHWSAQRGLPRPIAIRLLQQLASRKTNDADGNIDDVTLIMLMALLYAYD TSVLLVSEHTNPHTARLPILSDPDFAKGFLEALYAQSSWQTPRLDAIITYSFGLTLAS LRHAPGQLQAAALSAINRDEMLIDEALGAQVFGFFYRLLLEKDLVYTTEFIYRRVHLL ITDFIDFMHAKVSELRGRADESARTVISFLNEGLEPPPNLDSNFELLMLCVAKLYGDP RVSIKLCNEYWGPSDPTGSTFGVILPTAFKNTSRSVSLFKFISLASELLPQTLFKSYL KMISGLTRTEFSARCAFNMLKLPQVTTGTYAVSWDHFFSTLANYYNLMRNDFNTNIST GGDTIYRSRSIPRIITQREADHLVAVMGIIQAVAEHDEISRIMICEQANWQPPQVLLG LVACSTPLLLKAEILFTLAALAKSKETARAIWSHLEDSQIIPTVPVASNYGQCSLAEE IEQNESRLEQYKLTRGILQLLYTLMTGNMPKSLGVGPRKAGYDAYFNFVLESVLLKFY NRAYKDPAEKWQVGAQCLKLMYYLLATYRPRASDFQETRDEHPYPGYHVMMQLQVKSD MLHLLLRIVEEARERLDDYNRFHGKELLEECSLYALLLLEAALAKQNAFFETHSAANC PVMLSGLNRMLLDLNPRSRKPDHVLNIVKFVTYNSWLPRHSLAAVKILSAVTQLPNVS AQILSMYAQGSNEKLEIRQGFVECLEMEVGEARQSDELLDQLASNDHVPFLGFNEDGD RREAGDTESRSEPNTEEAALEGRPARIELQLKEAIVQLFEMNLSQQLPNFVYFLLGVD VLRDFMANEKQHLGIEMHCSCVNSLVLLLEKYLEQQRHSEEYCEHTANIVERIYHLFH GLCANRRTTETILRYFRLTCNDFLLRHLNSLPFRQHREDHVLHAMSHLLNCVSIDVKL AATHGQTTRYNLLCDILLMGNGTEAQRSAHGLPMELGHQSAPFYAMDLLPSAGGGPGS GSGSGSGSGVQGAGASTLKPPLLQETSQGLHANRLLDCLVLEMDTLSQPQLEFFDMQL TTQLLRDCESSDANPLINVRKLHYILHDELRMVQSTIASGQRKAISTEITVLLKHAVN LNRVRTQRCATLAFMEAWGQLVQVLFSSMPEAVLPVALRRQHIVDIIEKILIKVQPIQ PIIEISIQVSETVLLLLANLRYCCYQAEDQRGSEDHPNEESLANGNGIDAQAGKMSLG QRTIGNGERENGAGANSSNLRFILKSLVEWIMISEVKSQKLRINLYSALLNCLRIAKR LRTDEQLEYQETLTVRQESSGLEMRRDDRQRLKAMAADVIGTFGEKLIDTICHDAVTG HDVCRMLALACLDMISELHAVSTLCDFVATRGYLKHMLDSLGKSSEALCSILHPVPDH LRPLYVYESRMAFLTRMANTTVGARLLLAERALGVLSNMRVYDLQPDLKASELKRDEP QTFLPAIDERFRAILLPALGLCDAIVNSLGSRNNSAALQVLNFLFAHIDMVEAMLRTA TPFMDLGHLQQLAVISNLFARTTTHEVTALEDSLDVENDLELRNRLGRLQQLMIVVFG RFSVSEATIRRMLQQDQEQNGSSGDQAEGSKTLRVKYFLDIAANLSLYCRNAVTSHVK DSMTSKYLLTTMINDVTPLTGKMDSKKLTAIMHTILNQLKGSIGYYLSQKSIADNLLQ QRASLPNISFGPNGKQSYVDLSQRHSEKRSELMQAVFIAEQNLYLLWIHLDFYLRNAV VYANENRNAINESILDATNASVLNASQDEILQLKQLLISTFNETFCTQLITASEDYTV KCKGFNASLLRRIKALVQFAPVTANGDNSSFIS" misc_feature 557..5329 /gene="Nup205" /note="Nuclear pore complex scaffold, nucleoporins 186/192/205; Region: Nup192; pfam11894" /db_xref="CDD:463387" polyA_site 6302 /gene="Nup205" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tccatccctg gaagccggcg aggcgcaaca aacttgccgc gttttatttt tattctgttt 61 gataactgag aaacccagca aaatggatgg tgttaccgag gacatgtgga cgccgtacaa 121 gcatctgtac agcgttttcc aggcgacggt ggccaatccg agtggcgtca cctccgattt 181 ggagctgtgc ctgaagaagt acaagcacag cttcacgaac ttcctgcgca atccggccaa 241 gagcgaaaag agtcgcggtc atttgaggaa cgccttgaac gagggcattc cgcttcctgg 301 gcaatcgagg aagatcaagc tatcgcagga tctggtggac gaagccctca tcctctcgga 361 catgttcgac ctggacgagg tgttcgccgt ggagctgctt tgcaccgccc agcgccagca 421 gatgcatcat cctggtttgc ccagaggatt ggtggcggtg ctactttact atgatggaag 481 aaaagccatc agttgcgccc tgcgtgacat gttccaggcg gtcagcggcg tctcctggag 541 cactgagctg cccagggaga tcacctgcct ggtcaccaac tatgcgcaga gtctcgtgga 601 ggattctaat atcctgggac gcctgctgga gctgctcgag gagatggacg tggacaagga 661 gtgcatcctg ctgaccaaga accgcgcctt tggctccaag aagcaccaga accaggtgct 721 cggcctctac gaggacatcc agcgagcggt ggccatggcc ctgttccact ggtcggcgca 781 gcgcggcctg ccgcgaccca ttgccatccg tctgctgcag cagctggcca gccggaagac 841 caacgatgcg gatggcaaca tcgacgatgt gacgctgatc atgctgatgg ccctgctgta 901 cgcgtacgac acgtcggtgc tgctggtcag cgagcatacc aatccgcaca ccgcccgcct 961 gccgatactc agcgatccgg actttgccaa gggcttcctg gaggcgctct atgcgcagag 1021 cagctggcaa acgccgcgat tggatgcgat tatcacgtat agctttgggc tcacgctggc 1081 cagcttaagg catgcgccgg ggcagctgca ggcggccgct ttgtcggcca tcaaccgcga 1141 cgaaatgctc atcgacgagg ctctgggcgc ccaggtcttt ggcttcttct accgcctgct 1201 gctcgaaaag gatctggtct acaccaccga gttcatttac cgccgcgttc acctgctcat 1261 cacggacttt atcgacttta tgcacgccaa ggtttcggag ttgcgtggtc gtgcagatga 1321 atcggctcgc acggtcatca gtttcctgaa cgagggcctt gaaccgccgc ccaacctaga 1381 ctccaacttt gagctgctca tgctgtgcgt ggccaagttg tatggcgatc cgagggtcag 1441 cattaagctg tgcaacgagt actggggccc cagcgacccc acgggttcca ccttcggtgt 1501 tattttgccc actgccttta agaacacctc gcgttcggtg tcgctgttca agtttattag 1561 cctggccagc gaactgctgc cgcagactct gtttaaatcc tacctcaaga tgatttctgg 1621 actcacgcga acggaattct ccgcccgctg cgccttcaac atgctcaaac tgccccaggt 1681 gaccactggc acctatgccg tgagctggga tcacttcttc tccacgctgg ccaactacta 1741 caatttaatg cgcaacgact tcaatactaa tattagcacc ggtggcgata ccatctatag 1801 gagtcgctcc atcccgagga tcatcacgca acgcgaagcg gatcatctgg tggccgtcat 1861 gggcatcata caggcggtgg ccgagcacga cgagatatcg cgcatcatga tctgcgagca 1921 ggccaactgg cagcctcccc aggtgctcct cggcctggtg gcctgctcca cgccgctgct 1981 gctcaaggcg gagatactct tcacgctggc cgctctggcc aagtccaagg agacggcgcg 2041 ggccatctgg tcgcatttgg aggattcgca gattataccc actgtcccag tggccagcaa 2101 ctatgggcag tgcagtttgg cggaggaaat cgagcagaac gagagccgtt tggagcagta 2161 caagctgacg cggggcattc tgcagctgct ctacactctg atgactggaa atatgcccaa 2221 gagtttagga gtgggtccaa ggaaggccgg ctacgatgcg tatttcaact ttgtgctgga 2281 atcggtgctg ctgaagttct acaatcgagc gtacaaggat cccgccgaga agtggcaggt 2341 gggggcgcag tgcctgaagc tgatgtacta cctgctggcc acctatcgtc cgcgtgcctc 2401 ggactttcag gagacgcgcg acgagcatcc gtatcccggc taccatgtga tgatgcagct 2461 gcaggtgaag tccgatatgc tgcacctcct ccttcgcatt gtggaggagg cgcgcgagcg 2521 gctggacgac tacaatcgct ttcacggcaa ggagctgctc gaggagtgct ccctgtacgc 2581 cctgctgctc ctcgaggcgg cgctggccaa gcagaacgcc ttcttcgaga cccattcggc 2641 ggccaattgc cccgtgatgc tttctggact gaatcgcatg cttctcgacc tgaatcctcg 2701 cagcaggaag cccgatcatg tgctgaatat cgtcaagttt gtgacctaca acagctggct 2761 gccgcgtcat tcgctggccg ccgtcaagat cctgagtgcg gtgacccagc tgccgaatgt 2821 ctcggcccag atactcagca tgtacgcgca gggcagcaac gagaagctgg agatccggca 2881 gggatttgtc gagtgcctgg agatggaggt gggcgaggcc aggcagagcg acgagctgct 2941 cgaccagctg gcctccaatg atcatgtgcc cttcctgggt ttcaacgagg atggcgatcg 3001 cagggaagca ggagatactg aatctcgtag cgaaccgaat acggaggagg ccgctctgga 3061 gggcaggccg gcgcgcatcg agctgcagct gaaggaggcc attgtccagc tgttcgagat 3121 gaatctcagc cagcagctgc ccaactttgt gtactttctg ctgggcgtcg atgtgctgcg 3181 cgactttatg gccaacgaaa agcagcatct gggcattgag atgcactgtt cgtgtgttaa 3241 ctccttggtt ttgctgctgg aaaagtatct ggagcagcag cggcacagcg aggagtactg 3301 cgagcacacg gccaacattg tggagcgcat ctatcatctg tttcacggac tctgcgccaa 3361 tcgccgcacc acggagacca tactgcgcta ctttcggctc acctgcaacg actttctgct 3421 gcgccacctc aactcgctgc ccttccgcca gcaccgcgag gatcatgtgc tgcacgccat 3481 gagtcacctg ctcaactgtg tgtccatcga tgtcaagttg gcggccactc atggccagac 3541 gacgcgctac aatctgctgt gcgatattct gctgatgggc aatggcacgg aggcccagcg 3601 atcggcgcat ggactgccca tggagctggg tcaccagtcg gcgcccttct acgccatgga 3661 tttgctgcca agcgcaggag gaggacctgg ctcgggatcg ggttcagggt cgggttcggg 3721 tgtccaggga gcgggagcca gtacattgaa gccaccactc ctccaagaga cgtcgcaggg 3781 actgcatgcc aaccggctgc tcgattgttt ggtcctcgaa atggacactc tgagtcagcc 3841 gcagctggag ttcttcgaca tgcagctgac cacgcaactc ttgagggact gcgagtccag 3901 cgacgccaat ccgctgatca atgtgcgcaa actgcactac attctgcacg acgaactgcg 3961 catggtgcag agcaccatag ccagtggcca gcggaaggcc atctccacgg agatcacggt 4021 gctgctaaag catgcggtta atctgaatag ggtgcggact cagcgctgcg ccactttggc 4081 cttcatggag gcctggggtc agctggttca ggtgcttttt agcagcatgc ccgaggctgt 4141 gctaccggtg gcattgcggc gccagcacat cgtggatatc atcgagaaga tcctcatcaa 4201 ggtgcagccc atacagccga tcatcgagat ctccattcag gtcagcgaaa cggtgctgct 4261 gctgctggcc aatctgcgct actgctgcta ccaggcggag gatcagcggg gatccgagga 4321 tcatccgaat gaggagtctt tggccaatgg caatggcata gatgcgcagg cgggcaagat 4381 gagcctgggc cagaggacca tcggcaatgg cgaacgggag aacggcgccg gcgcgaatag 4441 cagcaatctg cggttcatcc tcaagagcct cgtcgagtgg atcatgatca gcgaggtgaa 4501 gtcgcagaag ctgcgcatca atctgtacag cgccctgctc aactgcctgc gcatagcgaa 4561 gcgcctgcgc accgacgagc agctggagta ccaggaaaca ttgacggtgc gccaggagag 4621 ctctggcctg gagatgcggc gcgacgatcg ccagcggctg aaggcaatgg ctgccgatgt 4681 gattggaacc tttggcgaga agctgatcga caccatctgc catgatgcgg tcaccggaca 4741 cgatgtgtgc cgcatgctgg cgctggcctg cctggacatg atctccgagc tgcatgcggt 4801 gagcacgctg tgcgactttg tggccacgcg cggctacctc aagcacatgc tggacagcct 4861 gggcaagtcg agcgaggcgc tgtgctcgat cctccaccca gtgccggatc atctgaggcc 4921 gctgtatgtc tacgagtcgc gaatggcctt cctcacgcgc atggcaaaca ccacagtggg 4981 cgcgcgattg cttctggcgg agcgagcact tggcgtgctg tcgaatatgc gggtctacga 5041 tctgcagcct gacctcaaag ccagcgaact gaagcgcgac gagccgcaga ccttcctgcc 5101 ggccattgat gagcgcttcc gcgcgatcct actgcccgcc ttgggcctct gcgatgccat 5161 tgtcaactcg ctgggatcgc gcaacaattc ggctgccctg caggtgctca actttctgtt 5221 cgcccacatc gacatggtgg aggcgatgct gcgcacggcc acgccgttca tggacttggg 5281 ccacctgcag cagctggccg tgatcagcaa tctgtttgcg cgcaccacca cgcacgaggt 5341 gacggcgctg gaggacagcc tggatgtgga gaacgatctg gagctgcgca atcgtttggg 5401 tcgcctgcag cagctgatga ttgtggtctt tgggcgattt tccgtcagcg aagctaccat 5461 tcggcgaatg ctgcagcagg atcaggagca gaacggcagc agcggcgatc aggcggaggg 5521 ctcgaagacg ctgcgcgtca agtatttcct ggacattgcc gcgaatcttt cgctctattg 5581 ccgcaatgcg gtgaccagcc atgtgaagga cagcatgacc tccaagtatt tgctgaccac 5641 catgatcaac gatgtgacgc cgctaactgg caaaatggac agcaagaagc tgacggccat 5701 catgcacacc atcctcaacc agctgaaggg ctccattggc tactacctct cgcagaaatc 5761 gattgccgac aatctgctgc agcagcgcgc ctccctgccc aacataagct tcggtcccaa 5821 cggcaaacaa agctatgtgg atttgagcca acggcacagc gagaagcgca gcgaactcat 5881 gcaggccgtc tttattgccg agcagaatct gtatttgctg tggatccacc tggacttcta 5941 tctgcgcaac gccgtcgtct acgccaacga gaatcgcaac gccatcaacg agagcatcct 6001 ggacgccacc aacgcctccg tgctgaatgc ctcgcaggac gagatcctgc agctgaagca 6061 gctgctcatc tccaccttca acgagacctt ctgcacgcag ctaatcaccg ccagcgagga 6121 ctacacggtc aagtgcaagg gcttcaatgc ctcgctcctg cgccgcatca aggcgctcgt 6181 ccagttcgcc cccgtcactg ccaacggcga caattcctcg ttcatctcgt aggcggcgca 6241 cagcacacac acacatctct agtttaatga ttcaataaaa atgaaatgtt gattttccta 6301 aa