PREDICTED: Drosophila takahashii RNA-binding protein 25

LOCUS       XM_017160556            2046 bp    mRNA    linear   INV 09-DEC-2024
            (LOC108070186), transcript variant X3, mRNA.
ACCESSION   XM_017160556
VERSION     XM_017160556.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017160556.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2046
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2046
                     /gene="LOC108070186"
                     /note="RNA-binding protein 25; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:108070186"
     CDS             541..1650
                     /gene="LOC108070186"
                     /codon_start=1
                     /product="RNA-binding protein 25"
                     /protein_id="XP_017016045.2"
                     /db_xref="GeneID:108070186"
                     /translation="MSAARLPYYQQDQEDQQRRTARGHQQRGYYERASSSRRDRERDR
                     DRERERSNRYSRSRSRSRSRSRSRSEERSSQRRRRHEQQRPSSRYHRDRDSRERDYSR
                     RSSHYRRSESPASASNPSTNSSSSSSGQRRGHQPSSAGRSELSAVQKAAAAAAAAAEQ
                     VQMAGKSMSAAAAASAVGAYYNLDTDEPFDKERIHREMEQKLREALAREGKVYPPPKP
                     EPPSHPVFANDGSFMELFKKMQEGQKQQQQPMQQQPGAMEEMLQQQQQQLASAEASSS
                     SAPALPAIAVGAASSAAAPYIAAAAAGKSAPPPPLVGRRRGGKVLKTGVVAKLKTPNE
                     SDVDPKDFWSLYLAEVNKYKSNACDTDNGKRPLVK"
     polyA_site      2046
                     /gene="LOC108070186"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaggcaccga tccgatcgat cgatcgatcg atcgaagcca accaaagaaa gcaggaactt
       61 ggccacaagg caaacaaatg aaaacttcgc aactcgtaac acacacacac gcacacacat
      121 agacactagc gcactaacac ttccgctggc ggaggaattc gcagcaggaa aaaaagaaaa
      181 gaaagaaaaa agtacaagtt acataactcg ctggtgcact cgggggtaga agaagtgggc
      241 gtaaggggcg tggaccgggg gcccagtctg catctgaatc ctcatccgcg aatccgaaaa
      301 tccgatacgt ttcagagtcg caatcgcaat cgcaagttaa gcatagaata gattcgagct
      361 gaaactcgaa ctaaactgga aggattctcc acaacaacaa caacaacagc aggaacaacc
      421 acggacgata acgtaacgta gccgcaacgt tggaacagca gcagcaacaa caacaagaac
      481 atcagcagcg gacatcgcaa acaatttcga attgcagatc atctactaca tccatccgac
      541 atgtcggcgg cccggctgcc ctactatcag caggatcagg aggaccagca gcggcgcacc
      601 gcacgtggcc atcagcagcg cggctactac gagcgtgcct cctcctccag gcgggacagg
      661 gagcgggatc gggatcggga gcgggagcgc agcaatcgct acagtcgcag ccgttcgcgt
      721 tcccgcagtc gcagtcgcag ccgctccgag gagcgttcta gccagcggcg ccgtcgccac
      781 gagcagcagc gtccctcgtc ccgctaccac agggatcgcg actccaggga gcgtgactac
      841 tcgaggcgct ccagccacta ccgccgctcg gaatcgccag cctccgcctc gaacccctca
      901 accaacagca gcagcagcag cagcggccag cgcaggggcc accagccctc gtccgccggc
      961 agatcagaac tgagcgccgt acagaaggca gccgctgccg ccgccgccgc cgcagaacaa
     1021 gtacaaatgg ccggcaagag catgagtgcc gctgccgccg cttcggcagt gggcgcctac
     1081 tataacctgg acaccgacga gcccttcgac aaggagcgca tccaccgcga gatggagcag
     1141 aagctgcgcg aggcgttggc ccgggagggc aaggtgtatc cgccgcccaa gccggagccg
     1201 ccctcgcatc ccgtcttcgc caacgacggc tcgttcatgg agctgttcaa gaagatgcag
     1261 gagggccaga aacagcagca gcagccgatg cagcagcagc caggagccat ggaggagatg
     1321 ctacagcagc agcagcagca gttggcctcg gcggaggcat cctcctcctc ggcgcccgcg
     1381 cttcctgcga ttgctgttgg ggctgccagc agcgctgcgg ctccgtatat tgcagccgcc
     1441 gctgctggga agtcggcgcc gccacctccg ctggtgggac gacgtcgcgg cggaaaggtg
     1501 ctgaagaccg gcgtggtggc caagctgaag acgcccaacg agagcgacgt ggaccccaag
     1561 gacttctggt cactgtattt ggccgaggtc aacaagtaca agagcaacgc ctgcgatacg
     1621 gacaatggca agcggccgct ggtcaagtag aaagcgggaa acgggaaaca ggaaacttga
     1681 acttgaacgc aggccgagca gagaaacgtg aaattcgatt ttgattcgac caataccacc
     1741 cagtcccatt cactagacac tagaccctca gaggattttt gaaacacgag aatagaggcg
     1801 ggcacagaga tccgtagttt gtagacgtag tcgagggctt tcgagctgtg taatttgtat
     1861 ttttttcaca cgggtcgagg gactagccgc tgcctcgatc cttatacaca taatacgata
     1921 atcataatct agccagtaag aagtactttt agaagatcca tgcgagatgt atctctctat
     1981 aaaatatgat tacgatatat atatatatac atataccgct cattaagcaa ccgcaaactt
     2041 gaagaa