PREDICTED: Drosophila takahashii RNA-binding protein 25

LOCUS       XM_017160554            1859 bp    mRNA    linear   INV 09-DEC-2024
            (LOC108070186), transcript variant X1, mRNA.
ACCESSION   XM_017160554
VERSION     XM_017160554.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017160554.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1859
                     /gene="LOC108070186"
                     /note="RNA-binding protein 25; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:108070186"
     CDS             354..1463
                     /gene="LOC108070186"
                     /codon_start=1
                     /product="RNA-binding protein 25"
                     /protein_id="XP_017016043.2"
                     /db_xref="GeneID:108070186"
                     /translation="MSAARLPYYQQDQEDQQRRTARGHQQRGYYERASSSRRDRERDR
                     DRERERSNRYSRSRSRSRSRSRSRSEERSSQRRRRHEQQRPSSRYHRDRDSRERDYSR
                     RSSHYRRSESPASASNPSTNSSSSSSGQRRGHQPSSAGRSELSAVQKAAAAAAAAAEQ
                     VQMAGKSMSAAAAASAVGAYYNLDTDEPFDKERIHREMEQKLREALAREGKVYPPPKP
                     EPPSHPVFANDGSFMELFKKMQEGQKQQQQPMQQQPGAMEEMLQQQQQQLASAEASSS
                     SAPALPAIAVGAASSAAAPYIAAAAAGKSAPPPPLVGRRRGGKVLKTGVVAKLKTPNE
                     SDVDPKDFWSLYLAEVNKYKSNACDTDNGKRPLVK"
     polyA_site      1859
                     /gene="LOC108070186"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tgacagctct cgatactttt cgtccatcgc caatctatcg tcgggctcgt gagattctcg
       61 ccagttgaaa atttttcgtc gtactctcgt aacaacaaag gcgaatccga aaatccgata
      121 cgtttcagag tcgcaatcgc aatcgcaagt taagcataga atagattcga gctgaaactc
      181 gaactaaact ggaaggattc tccacaacaa caacaacaac agcaggaaca accacggacg
      241 ataacgtaac gtagccgcaa cgttggaaca gcagcagcaa caacaacaag aacatcagca
      301 gcggacatcg caaacaattt cgaattgcag atcatctact acatccatcc gacatgtcgg
      361 cggcccggct gccctactat cagcaggatc aggaggacca gcagcggcgc accgcacgtg
      421 gccatcagca gcgcggctac tacgagcgtg cctcctcctc caggcgggac agggagcggg
      481 atcgggatcg ggagcgggag cgcagcaatc gctacagtcg cagccgttcg cgttcccgca
      541 gtcgcagtcg cagccgctcc gaggagcgtt ctagccagcg gcgccgtcgc cacgagcagc
      601 agcgtccctc gtcccgctac cacagggatc gcgactccag ggagcgtgac tactcgaggc
      661 gctccagcca ctaccgccgc tcggaatcgc cagcctccgc ctcgaacccc tcaaccaaca
      721 gcagcagcag cagcagcggc cagcgcaggg gccaccagcc ctcgtccgcc ggcagatcag
      781 aactgagcgc cgtacagaag gcagccgctg ccgccgccgc cgccgcagaa caagtacaaa
      841 tggccggcaa gagcatgagt gccgctgccg ccgcttcggc agtgggcgcc tactataacc
      901 tggacaccga cgagcccttc gacaaggagc gcatccaccg cgagatggag cagaagctgc
      961 gcgaggcgtt ggcccgggag ggcaaggtgt atccgccgcc caagccggag ccgccctcgc
     1021 atcccgtctt cgccaacgac ggctcgttca tggagctgtt caagaagatg caggagggcc
     1081 agaaacagca gcagcagccg atgcagcagc agccaggagc catggaggag atgctacagc
     1141 agcagcagca gcagttggcc tcggcggagg catcctcctc ctcggcgccc gcgcttcctg
     1201 cgattgctgt tggggctgcc agcagcgctg cggctccgta tattgcagcc gccgctgctg
     1261 ggaagtcggc gccgccacct ccgctggtgg gacgacgtcg cggcggaaag gtgctgaaga
     1321 ccggcgtggt ggccaagctg aagacgccca acgagagcga cgtggacccc aaggacttct
     1381 ggtcactgta tttggccgag gtcaacaagt acaagagcaa cgcctgcgat acggacaatg
     1441 gcaagcggcc gctggtcaag tagaaagcgg gaaacgggaa acaggaaact tgaacttgaa
     1501 cgcaggccga gcagagaaac gtgaaattcg attttgattc gaccaatacc acccagtccc
     1561 attcactaga cactagaccc tcagaggatt tttgaaacac gagaatagag gcgggcacag
     1621 agatccgtag tttgtagacg tagtcgaggg ctttcgagct gtgtaatttg tatttttttc
     1681 acacgggtcg agggactagc cgctgcctcg atccttatac acataatacg ataatcataa
     1741 tctagccagt aagaagtact tttagaagat ccatgcgaga tgtatctctc tataaaatat
     1801 gattacgata tatatatata tacatatacc gctcattaag caaccgcaaa cttgaagaa