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LOCUS XM_017160552 6702 bp mRNA linear INV 09-DEC-2024 X1, mRNA. ACCESSION XM_017160552 VERSION XM_017160552.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017160552.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6702 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6702 /gene="pico" /note="pico; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108070183" CDS 976..4395 /gene="pico" /codon_start=1 /product="abnormal cell migration protein 10 isoform X1" /protein_id="XP_017016041.2" /db_xref="GeneID:108070183" /translation="MDCGGIAAHQQRQLQQQQLHLLQQQLQQQHQQQQQQQHNLEEAA TITNINLRGILVDGAASGGGAGGTGAVAGGATTAAGFVAGGDCPGIGAAAGAGVKLRR HSDRPLTPESKQLSHTYRISMANLEDSQESELDQILGELSLLEAQISYGEASLLPATI NAAPLGGTMQPPPPGAVASSLVSMSAASSRSHSRTNSSISADVSSCSSSGISENGHGM GLGIGLPGGPVIVHPPPPLGMTMGITMGVVTPREPRTESPDNDSAFSDTVSLLSSESS ASSNTSLQQQQQQQQLQQQQLQQQQQQLQQKQKQQLANSGEKQQSISKAAKIQLALHK LESASIRRLFVKAFTSDGASKSLLVDERMVCGHVTRLLADKNHVLMQSNWALVEHLGD LQMERLFEDHELLVDNLMTWNSDAGNRVLFQQRPDKVALFLRPELYLPGPQMAPGCQH DEQTRQMLLDEFFDSHNQLQLDGPLYMKADPKKGWKRYHFVLRSSGLYYFPKEKTKNT RDLACLNLFHGHNVYTGLGWRKKWKSPTDYTFGFKAVADSSLGKTCRSLKMLCAEDLP TLDRWLTAIRVCKYGKQLWDSRKSLMEDLCLGRDADAVSQSSFAVSMRSESISSISSA VPSQCGSVSSAISSMSHSTSGRTSRASSSSSSGCLSDDNNGFDSEFTTGTIKRKPSMK PNLPLTTMTRQLKEVGEITICESGGGGDASSPERSGTLTRRHSRRKSQESNGSGTLKR RPMPVVSSTAAAAAAAVKQAEPMGSASSTSSSSNSTPTPTPSICAKPPPGDAAASLMC SSTLSLDSLPPPPPEEDQDVYGSQLSLASLPPPPPPEEVLAMSYAGPPSPATPTPMST MIMPNSNGSLPPAVPAKPIKPAVKQATGALKAAPPYKAPPDYVGPAAAGPPLPPPPAP PAQKKVSFADSPVLLRRKMCSPEPVLPQRSPSTTLSCSSTGSAAAAYQTYAPGPMLPP RSDLARLSSQSNGSGISSEITSPKRLQESASNPPRDFLKDLQRVMRKKWQVAQKCKAE PATTPHEVLGFRDFSNEDLLAAHNLNSGANSSHYYRETANVSHWVQEHYEYAHNALYE NVHGQARTGVAGGDAGTPPLPPPPGNSVAAKKRPPPPPPKRSDKTHLTNRV" misc_feature 1996..2253 /gene="pico" /note="Ras-associating (RA) domain found in Caenorhabditis elegans abnormal cell migration protein 10 (MIG-10) and similar proteins; Region: RA_MRL_MIG10; cd16138" /db_xref="CDD:340555" misc_feature order(2011..2013,2026..2049,2095..2106,2149..2151, 2203..2208,2215..2217) /gene="pico" /note="RA-PH-RAP1 interaction site [polypeptide binding]; other site" /db_xref="CDD:340555" misc_feature 2365..2736 /gene="pico" /note="Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain; Region: PH_APBB1IP; cd01259" /db_xref="CDD:269961" polyA_site 6702 /gene="pico" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgataacttt gtcgacttat cggaccggac tgacgttgtg cgggcgtttt cggggcgttt 61 tttgtgaaaa accaagcacg gacttttcgt agttttcccc gatagcacca accgtttgtt 121 ttgttcctct tttttttctg ttctgtctgg gcatggcatc gcatccaagt gtccggctcg 181 aattgtgagt gaatcaccga tggccgcggg cggtggaaac tgcacctttg tgggaaatcg 241 aaatgaaaat gggaatgcaa atgcaaatgc aatcggcgca gcgcggctac aacaacaaca 301 aatagctaaa aaggattcgc actcgcattc agtgaataga ttgtagaaat tgtcgaatta 361 tcctcccaat tcaagttcga ttggaaatta ttcgaattgg aattgaaatt gtaactggag 421 ttggagttgg aattggagta cgagcgagag agagagaggc agtgcaagtg tgtgggggta 481 gcagtcacac agacgagcca gcgcacgcac acactcacta ctcccagtgc ataaaactcc 541 aaattgcgtt cgtctctctc ttcgttcgcc cacgcaacgc ctgcagagaa agagagagag 601 agagcgaaag ggagctcgag agcaagcgag agagcaagga agtggttttt ccaccgaaaa 661 tatggacaaa ggcgaactgc agagttagct gaaaaaaaaa cgaagaaacg agacacaaac 721 agaaacaaaa accgaaatag cggttaactc cgggattcgg ggctccctta ctgcgaatcg 781 ttgaaattca agacggatcg ctatcgcatt tcttcaatta tgtctgtttc gcttttcatt 841 ccgctgcaat aagcgatcgc cacacagaaa gggagagacg gcgagcgaaa ggaggagaag 901 agaggcgctc tcaattgacg actccactcc cactcccaca cacaccccct cccgcccctc 961 gtccccataa ttactatgga ttgtggtggt attgcggcac atcaacaacg gcaactacaa 1021 cagcaacaac tgcacttact ccagcaacag ctacaacaac aacatcagca gcagcagcaa 1081 caacaacaca acctcgagga agcagcaaca ataacaaata tcaacctaag gggcatcttg 1141 gtggacggcg ctgccagcgg cggaggagca ggcggaacag gagcagtggc tggtggtgcg 1201 acgaccgccg ctggcttcgt ggctggtggg gattgccctg gaattggcgc cgcagctggc 1261 gctggcgtca agctgcgcag gcacagcgat cgtcccctga cgccggagtc caagcagctc 1321 tcccacacat accgcatctc catggccaat ctggaggact cgcaggagtc ggagctggac 1381 cagatcctcg gcgagctgag cctgctggag gcgcagatca gctacggcga ggcctccctg 1441 ctgcccgcga ccattaatgc tgctccactg ggaggaacaa tgcagccacc accgcccgga 1501 gcggtggctt cgtcattggt ttccatgtcg gccgcctcgt cgcgctccca ttcgcggacc 1561 aacagcagca tctcggcgga cgtgagcagc tgctcgtcgt cggggatctc ggagaatggt 1621 catgggatgg gtctgggaat tggactgcca ggcggaccag tgattgtcca tccaccgcct 1681 ccgctcggca tgaccatggg cataacgatg ggcgttgtga cgccccgtga accgcgcacc 1741 gagtcgcccg ataatgattc ggcctttagc gataccgtat ccctcttgtc cagcgaatcg 1801 tcggcctcct cgaacacatc cctgcagcaa caacagcaac agcagcaact gcagcagcag 1861 cagctgcaac agcaacagca gcagcttcag cagaagcaga agcaacagct ggccaacagc 1921 ggcgagaagc agcagagtat ctcgaaggcg gccaagatcc agttggcttt gcacaagctg 1981 gagagcgcct ccatccggcg gctgttcgtc aaggccttca cctcggacgg cgcctccaag 2041 tcgctgctgg tggacgagcg catggtctgc ggtcatgtga cgcggctgct ggccgacaag 2101 aatcacgtgc ttatgcagtc caactgggcg ctggtggagc acctgggcga tcttcagatg 2161 gaacgcctct tcgaggacca cgagctgctg gtggacaacc taatgacctg gaactcggac 2221 gccggcaatc gcgtgctctt ccagcagcga cccgacaagg tggctctgtt tttgcgcccc 2281 gaactctatc tgccgggacc ccagatggcg cccggttgcc agcatgacga gcagacgcgg 2341 cagatgctgc tcgacgagtt cttcgactcg cacaatcagc tgcagttgga cggaccgctc 2401 tacatgaagg ccgatcccaa gaagggctgg aagcggtatc actttgtgtt gcgctcctcg 2461 ggtctctact actttcccaa ggagaagacc aagaacaccc gtgacctggc ctgcctgaat 2521 ctctttcacg gccacaacgt gtacaccggt ttggggtggc gcaagaagtg gaagtcgccg 2581 accgactaca cctttggctt caaggcggtg gccgattcct cgctgggcaa gacgtgccgc 2641 tccctcaaga tgctctgcgc cgaggatctg cccacgctcg accgctggct gacggccatt 2701 cgggtgtgca agtacggcaa gcagctgtgg gacagccgca agtcgctaat ggaggatctc 2761 tgcttgggcc gcgatgccga tgccgtttcg cagtcgagct tcgccgtctc catgcgcagc 2821 gagtcgatct cgagcatctc gtcggcggtg ccctcgcaat gcggcagcgt ttcctcggcc 2881 atcagcagca tgtcccattc gaccagcggc cgcacgtcgc gcgcctcgag cagcagctcc 2941 agcggctgcc tgtcggacga caacaacggc ttcgactcgg aattcaccac gggcaccatt 3001 aagcgcaagc cctcgatgaa gcccaacctg ccgctcacga cgatgacgcg ccagctgaag 3061 gaggtgggcg agattacgat ctgtgagagc ggcggcggcg gcgatgccag ttcccccgag 3121 agaagcggta cgctgacgcg acgccacagc cgccgcaagt cgcaggagag caacggcagt 3181 ggaacgctca agcggcgacc catgccggtg gttagcagca ctgcggcggc ggcggcggcg 3241 gcggtcaagc aggcggagcc catgggcagt gcctcctcca cgtcgtccag cagcaattcc 3301 acgcccacgc ccacgccgag catctgcgcc aagccgccgc cgggcgatgc agccgcctcg 3361 ctgatgtgct catccacgct ctccttggac tcgctgcccc cgccgccgcc ggaggaggat 3421 caggatgtgt acggttcgca gctgtcgctg gcttccctgc cgccgccacc gccgcccgag 3481 gaggtgctgg ccatgagcta tgcagggccg cccagtccag ccactcccac accaatgagc 3541 acaatgatca tgccgaacag caatggatcg ctgccgccgg cagtgccggc caagccgatc 3601 aagccggcgg ttaagcaagc gactggcgct ctgaaggcag cgccaccata caaagcgccg 3661 ccggattatg tgggtcccgc cgccgccgga ccgccgctgc cgccgccgcc ggcgcctccc 3721 gcccagaaga aggtctcgtt tgcggactcg ccggtgctgc tgcgccgcaa gatgtgctca 3781 ccggagccgg tgctgccgca gcgatcgccc agcaccacgc tgagctgcag ctcgacggga 3841 tcagcggccg ccgcctatca gacctacgct ccgggaccga tgctgccgcc gcgatcggat 3901 ctggcgcgtc tgtccagcca gagcaacggg agcgggatta gtagcgagat cacctcgccc 3961 aagcgcctgc aggagtccgc ctcgaatccg ccccgcgact tcctcaagga tctgcagcgt 4021 gtgatgcgca agaagtggca ggtggcgcag aagtgcaagg cggagccggc caccacgccc 4081 cacgaggtgc tgggcttccg ggactttagc aacgaggatc tgctggccgc ccacaaccta 4141 aattcggggg ccaactcctc gcactactac cgcgaaacgg ccaacgtgag ccactgggtg 4201 caggagcact acgagtatgc gcataacgcg ctctacgaga acgtccacgg ccaggcgagg 4261 acgggggtag ctggcggaga tgcgggcaca ccgccgctgc cgccgccgcc cggcaactcg 4321 gtggcggcca agaagcgtcc gccgccgccg ccgccgaaga ggagcgacaa gacgcacctg 4381 accaaccggg tgtaggatct aactgaagaa gagtgcaatc cgcacaatct tcagtctcca 4441 gaggagggaa tttcgtgccg gagcgcaaat atttacttgt ctacgagaaa gcaaagaaaa 4501 tgaatcttac aaattcctat ttaagtctag gcgacaacta agcgagatgg aagaaaaagc 4561 actaattgaa tcatacatac atgtatgact atatatattt tctaagaata tgctatggcc 4621 acgcccactt ctcttacaaa agtattacgc ataacagaga atcaaactgt agaaactcct 4681 tttttaagtt cagtgtcaaa ccgcgtcaaa agggtcaaca aatttgtggc catctactca 4741 aggttttaga taatattttt gagcttttcg ctaaatgcaa aatgggtttt tctttattcg 4801 ttttttaaat ttaagaatat taaaagagcg cagtaaaaat atagtatttt tgttgaccct 4861 tttgactctg tttgattatt caaccatatt tctgattaat ttcgtaaatc gaaaactcag 4921 aaaaagaaaa ggagctctgc actagtaaaa atatttaaga taaattttag tttgtaaaaa 4981 gaagagaaaa attaattttt aaaacgatag tgcattattt aaaaaacact aaattagcgt 5041 tagataagtg tacaatgttt ttatatatac atgcactttt taattgttca gttgctctta 5101 gtattgatat tttatatttt tttttcgata atctttgtaa cggtagagtg aacgttttgt 5161 aagcgcatga aatgcgctgc gctagcaaag gaaatgcctt ataaagcata taaacctaaa 5221 tagggaaagc cctgcatata cacctaatat atatattaat gcatatatat atgtgtatgt 5281 atgtgtgttg atctatccaa attatttgct gtttaaagcg atactattct ttttacccac 5341 aaattttaat tccacattga ttgttcagtt gaaataacaa agtgcttagt tttcaaaaga 5401 tttgtcaagt tcctcaaata gtgttacaat tatcattctc tttgtactta taccgaaccg 5461 cagataagac agacagatca gccataaaat gcaatttgta tgtgcaaatc aaactatttc 5521 aattgaaggc aataagagaa aatggaatta tttctgtaca caaatcaaat atgtaattgt 5581 aattgtaata atatataaat taatattttc ctaaatttcg tttacaaatt ttgtttccca 5641 acatatcatt tcttaagcgt tcctataggt tcaattttta tgtgcatgca ggcattgaat 5701 acgttcaata aagcttaatt ctttggggat tcttttccca aaagaaatta tgcgtagaat 5761 agctttcgat tcgctacgac taaatatata ttgcattctt taaatggacg atttaatatc 5821 attgatcgat taagtatttg atcatttttg taattgtttt cgtgtagtaa cttgtttgcc 5881 atttgttttt atgtatgttt gtgtacagcc agagacagcc atatatacaa tatacacata 5941 attatagccg gaacccgaat aatttgagtt gaaatgtatc tgaaatcaaa cgttgactgt 6001 tacggtccca atacacattg tatatatagg caaagctata tagttctgta tgaagttttg 6061 ttacgtatta gtcggcatgt gtaatgcgat cgaatagtga tcgatcgaac caatcgagta 6121 aaacttcgcc tttcttctcc agccatccag ccatcctaaa agtgttcagt ctcccatccc 6181 cgaagatccc gcatcagcta tatatgcttg cttttgtttc ccatcctacg tcaaatatat 6241 atatatatat atgaaatata tatagaaact ttcggttttg aatacaagaa actagcattg 6301 ggtttattat ggtaaattaa aattttactt tcctacgtat acaaaactaa agggtattat 6361 gcatatagat ctagatataa acatacttaa ataaaggaaa tgccaatttt ttaaagcttg 6421 aatttatatg aacatatttt ttagacacta tacgctatat atatatctat atatatatgg 6481 tagcaacaca aggatgtgcc ataggcgccg tcgtcgtgtc aaaacaaaaa aaaaaagaga 6541 agagaaagaa aaacctgcaa cattttttgc taaatgaatg taataaaatc taaatgaacc 6601 tagtcattaa gtccaagata aactgaaaga aacatttaaa agctaaataa atttatatat 6661 aaatgacata catatacaca tatgtaattg tacgcaaaag aa